| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2500514 = | 103 (1.100) | 8 (0.090) | 6/240 | NT | 7.4% | coding (2372/2454 nt) | PP_2193 | ferric siderophore receptor |
| ? | NC_002947 | 2500534 = | 101 (1.130) | coding (2392/2454 nt) | PP_2193 | ferric siderophore receptor | |||||
CAGCCCATGTATTTGCGCAGGATTTGCTGGCGGCGTTTGCCTGAACAGGCCCGTTCAGGCCACCACAATCAGTAAGCCATGCTCCAGCTCAGCGTATAGGTCCGCCCACGCCCCTGGTAGTCATACAGATACGCCGGCCCGTAGGTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2500664‑2500514‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTATCTGTATGACTACCAGGGGCGTGGGCGGACCTATACGCTGAGCTGGAGCATGGCTTACTGATTGTGGTGGCCTGAACGGGCCTGTTCAGGCAAACGCCGCCAGCAAATCCTGCGCAAATACATGGGCTGCCTCGCCAACCCCCTGT > NC_002947/2500534‑2500681 CAGCCCATGTATTTGCGCAGGATTTGCTGGCGGCGTTTGCCTGAACAGGCCCGTTCAGGCCACCACAATCAGTAAGCCATGCTCCAGCTCAGCGTATAGAGATGCCGACACCCCTGGTAGTCATACAGATACGCCGGCCCGTAGGTCGGC < 1:1616992/150‑1 TGCTCCAGCTCAGCGTATAGGTCCGCCCACGCCCCTGGTAGTCATACAGATACGCCGACCTACGGGCCGGCGTATCTGTATGACTACCAGG < 1:1146285/91‑1 TGCTCCAGCTCAGCGTATAGGTCCGCCCACGCCCCTGGTAGTCATACAGATACGCCGACCTACGGGCCGGCGTATCTGTATGACTACCAGG > 2:1146285/1‑91 ACAGATACGCCGGCCCGTAGGTCGGCGTATCTGTATGACTACCAGGGGCGTGGGCGGACCTATACGCTGAGCTGGAGCATGGCTTACTGATTGTGGTG < 1:1309728/98‑1 ACAGATACGCCGGCCCGTAGGTCGGCGTATCTGTATGACTACCAGGGGCGTGGGCGGACCTATACGCTGAGCTGGAGCATGGCTTACTGATTGTGGTG > 2:1309728/1‑98 GCCGGCCCGTAGGTCGGCGTATCTGTATGACTACCAGGGGCGTGGGCGGACCTATACGCTGAGCTGGAGCATGGCTTACTGA > 1:1825572/1‑82 GCCGGCCCGTAGGTCGGCGTATCTGTATGACTACCAGGGGCGTGGGCGGACCTATACGCTGAGCTGGAGCATGGCTTACTGA > 1:1825693/1‑82 GCCGGCCCGTAGGTCGGCGTATCTGTATGACTACCAGGGGCGTGGGCGGACCTATACGCTGAGCTGGAGCATGGCTTACTGA < 2:1825572/82‑1 GCCGGCCCGTAGGTCGGCGTATCTGTATGACTACCAGGGGCGTGGGCGGACCTATACGCTGAGCTGGAGCATGGCTTACTGA < 2:1825693/82‑1 GGCGTATCTGTATGACTACCAGGGGCGTGGGCGGACCTATACGCTGAGCTGGAGCATGGCTTACTGATTGTGGTGGCCTGAACGGGCCTGTTCAGGCAAACGCCGCCAGCAAATCCTGCGCAAATACATGGGCTGCCTCGCCAACCCCCT < 2:720992/150‑1 GGCGTATCTGTATGACTACCAGGGGCGTGGGCGGACCTATACGCTGAGCTGGAGCATGGCTTACTGATTGTG < 1:1400797/72‑1 GGCGTATCTGTATGACTACCAGGGGCGTGGGCGGACCTATACGCTGAGCTGGAGCATGGCTTACTGATTGTG > 2:1400797/1‑72 GCGTATCTGTATGACTACCAGGGGCGTGGGCGGACCTATACGCTGAGCTGGAGCATGGCTTACTGATTGTGGTGGCCTGAACGGGCCTGTTCAGGCAAACGCCGCCAGCAAATCCTGCGCAAATACATGGGCTGCCTCGCCAACCCCCTG < 2:2255092/150‑1 CGTATCTGTATGACTACCAGGGGCGTGGGCGGACCTATACGCTGAGTTGGAGCATGGCTTACTGATTGTGGTGGCCTGAACGGGCCTGTTCAGGCAAACGCCGCCAGCAAATCCTGCGCAAATACATGGGCTGCCTCGCCAACCCCCTGT < 1:994382/150‑1 CAGCCCATGTATTTGCGCAGGATTTGCTGGCGGCGTTTGCCTGAACAGGCCCGTTCAGGCCACCACAATCAGTAAGCCATGCTCCAGCTCAGCGTATAGGTCCGCCCACGCCCCTGGTAGTCATACAGATACGCCGGCCCGTAGGTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2500664‑2500514‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTATCTGTATGACTACCAGGGGCGTGGGCGGACCTATACGCTGAGCTGGAGCATGGCTTACTGATTGTGGTGGCCTGAACGGGCCTGTTCAGGCAAACGCCGCCAGCAAATCCTGCGCAAATACATGGGCTGCCTCGCCAACCCCCTGT > NC_002947/2500534‑2500681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |