New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2581643 =	62 (0.660)	11 (0.120)	9/244	NT	15.2%	coding (822/867 nt)	PP_2262	sugar ABC transporter permease
	?	NC_002947	2581670 =	62 (0.680)					coding (849/867 nt)	PP_2262	sugar ABC transporter permease

TTGAACGACATGTTCAGCAACCAGTAGATCGGCACCAGCAGGAAGAAGAAGTACAGCAGCAGGGCCATTGATTTGCGTGTGCTCATGGCCTAGTCCTTGTCGGCATGGGTCATGGCTG‑TG‑TAGAACAGCCACGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2581777‑2581643 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGAACATGTCGTTCAAGAGCAACGCCGAGAT  >  NC_002947/2581670‑2581792                                                                                                                                                                                                                                                                      TTGAACGACATGTTCAGCAACCAGTAGATCGGCACCAGCAGGAAGAAGAAGTACAGCAGCAGGGCCATTGATTTGCGTGTGCTCATGGCCTAGTCCTTGTCGGCATGGGTCGTGGCTG‑TTCTA‑CACAGCCATGACCCATGCCGACAAGGA                                                                                                              >  1:2031668/1‑150    AACGACATGTTCAGCAACCAGTAGATCGGCACCAGCAGGAAGAAGAAGTACAGCAGCAGGGCCATTGATTTGCGTGTGCTCATGGCCTAGTCCTTGTCGGCATGGGTCGTGGCTG‑TTCTA‑CACAGCCATGACCCATGCCGACAAGGACTA                                                                                                           <  2:2031668/150‑1                     CCAGTAGATCGGCACCAGCAGGAAGAAGAAGTACAGCAGCAGGGCCATTGATTTGCGTGTGCTCATGGCCTAGTCCTTGTCGGCATGGGTCGTGGCTGTTC‑TA‑CACAGCCATGACCCATGCCGACAA                                                                                                                 >  1:999337/1‑127                     CCAGTAGATCGGCACCAGCAGGAAGAAGAAGTACAGCAGCAGGGCCATTGATTTGCGTGTGCTCATGGCCTAGTCCTTGTCGGCATGGGTCGTGGCTGTTC‑TA‑CACAGCCATGACCCATGCCGACAA                                                                                                                 <  2:999337/127‑1                                                                                                             GTCATGGCTG‑TG‑TAGAACAGCCATGACCTATGCCGACAAGGACTAGGCCATGAGCAAACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTAGTGCCGATCTACTGGTTGCTGAACATGTCGTTCAAGAGCAACGCCGAGAT  >  2:1253846/1‑150                                                                                                             GTCATGGCTG‑TG‑TAGAACAGCCACGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTG                                      >  1:1627463/1‑114                                                                                                             GTCATGGCTG‑TG‑TAGAACAGCCACGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTG                                      <  2:1627463/114‑1                                                                                                              TCATGGCTG‑TG‑TAGAACAGCCATGACCCATGCCGACAAGGACTAGGTCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCC                                                         <  1:1586171/94‑1                                                                                                              TCATGGCTG‑TG‑TAGAACAGCCATGACCCATGCCGACAAGGACTAGGTCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCC                                                         >  2:1586171/1‑94                                                                                                              TCATGGCTG‑TG‑TAGAACAGCCACGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGA                              <  1:404433/121‑1                                                                                                              TCATGGCTG‑TG‑TAGAACAGCCACGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGA                              >  2:404433/1‑121                                                                                                                                                                                                                                                                      TTGAACGACATGTTCAGCAACCAGTAGATCGGCACCAGCAGGAAGAAGAAGTACAGCAGCAGGGCCATTGATTTGCGTGTGCTCATGGCCTAGTCCTTGTCGGCATGGGTCATGGCTG‑TG‑TAGAACAGCCACGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2581777‑2581643 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGAACATGTCGTTCAAGAGCAACGCCGAGAT  >  NC_002947/2581670‑2581792

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.