New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 295712988 (0.940)4 (0.050) 4/220 NT 5.1% intergenic (+41/‑155) PP_2588/PP_2589 class III aminotransferase/aldehyde dehydrogenase family protein
?NC_002947 = 2957186 71 (0.860)intergenic (+98/‑98) PP_2588/PP_2589 class III aminotransferase/aldehyde dehydrogenase family protein

CGACCCTGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2956967‑2957129
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcaTGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCG‑GGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCCGGGT  <  NC_002947/2957186‑2957041
                                                                                                                                                                                                                                                                                                                      
CGACCCTGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCT                                                                                                                                                                  >  1:1347962/1‑150
   CCCTGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTG                                                                                                                                                               <  2:2154436/150‑1
   CCCTGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTG                                                                                                                                                               <  1:2245881/150‑1
    CCTGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGG                                                                                                                                                              <  1:1887443/150‑1
    CCTGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGG                                                                                                                                                              <  1:568956/150‑1
          CCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCTGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGG                                                                                                                                                        <  2:1306604/150‑1
           CGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGG                                                                                                                                                       <  1:750891/150‑1
                                                     CTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGG                                                                                                                                                        >  1:1376762/1‑107
                                                     CTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGG                                                                                                                                                        <  2:1376762/107‑1
                                                      TGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGG                                                                                                                                                              <  2:2293027/100‑1
                                                      TGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGG                                                                                                                                                              >  1:2293027/1‑100
                                                       GGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCATGCCCGCGACTCAGGCGACACGGTGGATGGCACCGGCTTCGC                                                                                                           <  2:1347962/150‑1
                                                             GCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGT                                                                                                     <  2:2190484/150‑1
                                                                    GAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCG‑GG                                                                                             >  2:2371664/1‑150
                                                                             CGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCG‑GGCGTGCCCGC                                                                                    <  1:2371664/150‑1
                                                                              GGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGT                                                                                                                                                                >  2:1428039/1‑74
                                                                              GGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGT                                                                                                                                                                <  1:1428039/74‑1
                                                                                                                                                   CCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCG‑G                                                                                              >  1:1202682/1‑70
                                                                                                                                                   CCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCG‑G                                                                                              <  2:1202682/70‑1
                                                                                                                                                     TGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCG‑GGCGTGCCCGCTCCCACATGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGG            <  2:1034121/150‑1
                                                                                                                                                     TGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCG‑GGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGG            <  1:2365753/150‑1
                                                                                                                                                     TGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGAAGGCACCGGCTTCGCCGGTGTTCGCG‑GGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGG            <  2:2006968/150‑1
                                                                                                                                                          GAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCG‑GGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGTCGAGCCGCGCCGTGCGGTCTACGGCTATC       >  2:123567/1‑150
                                                                                                                                                          GAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTT                                                                                                    >  2:2019614/1‑58
                                                                                                                                                          GAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTT                                                                                                    >  2:2019723/1‑58
                                                                                                                                                          GAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTT                                                                                                    <  1:2019723/58‑1
                                                                                                                                                          GAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTT                                                                                                    <  1:2019614/58‑1
                                                                                                                                                          GAGCGGGCATGCCAGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTT                                                                                                    >  1:596435/1‑58
                                                                                                                                                          GAGCGGGCATGCCAGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTT                                                                                                    <  2:596435/58‑1
                                                                                                                                                           AGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCG‑GGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCC      <  1:956876/150‑1
                                                                                                                                                             CGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCG‑GGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCCGG    <  2:1898210/150‑1
                                                                                                                                                             CGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCG‑GGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCCGG    >  1:2130509/1‑150
                                                                                                                                                               GGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTT‑GCGCGCCGTTCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCCGGGg  >  2:2160207/1‑149
                                                                                                                                                                                                                                                                                                                      
CGACCCTGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2956967‑2957129
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcaTGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCG‑GGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCCGGGT  <  NC_002947/2957186‑2957041

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.