| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3472643 | 77 (0.830) | 5 (0.060) | 5/236 | NT | 5.5% | intergenic (‑69/+39) | PP_3084/PP_3085 | ferric siderophore receptor/transmembrane sensor |
| ? | NC_002947 | = 3472685 | 98 (1.110) | coding (963/966 nt) | PP_3085 | transmembrane sensor | |||||
GCTTAGGGCCTTCAAAGGCAAGCGGTACGGCTGGCGAGGCGTCATGCGTGGGTCCTGTGGGTGCAGAAATGAAGGTTCTGCACTCATCACCGGACGACGCAGGAAAAGGTATCAATCGTGCTGCCCATCGTGGGAACAACTGTCCTGCTCACACGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3472488‑3472643‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacacgtGTGAAGCCCTGGCAACGCTCCCGGTGATCGCGCCAAGCTTCAACGTGTGAGCAGGACAGTTGTTCCCACGATGGGCAGCACGATTGATACCTTTTCCTGCGTCGTCCGGTGATGAGTGCAGAACCTTCATTTCTGCACCCACAGGACCC < NC_002947/3472685‑3472537 GCTTAGGGCCTTCAAAGGCAAGCGGTACGGCTGGCGAGGCGTCATGCGTGGGTCCTGTGGGTGCAGAAATGAAGGTTCTGCACTCATCACCGGACGACGCAGGCAACGGGATCAATCATGCTGCCCATCGTGGGAACAACTGTCCTGCTC > 2:1590509/1‑150 TTAGGGCCTTCAAAGGCAAGCGGTACGGCTGGCGAGGCGTCATGCGTGGGTCCTGTGGGTGCAGAAATGAAGGTTCTGCACTCATCACCGGACGACGCAGGAAAAGGTATCAATCGTGCTGCCCATCGTGGGAACAACTGTCCTGCTCAC > 1:151041/1‑150 TTAGGGCCTTCAAAGGCAAGCGGTACGGCTGGCGAGGCGTCATGCGTGGGTCCTGTGGGTGCAGAAATGAAGGTTCTGCACTCATCACCGGACGACGCAGGAAAAGGTATCAATCGTGCTGCCCATCGTGGGAACAACTGTCCTGCTCAC > 2:2282793/1‑150 CTGTGGGTGCAGAAATGAAGGTTCTGCACTCATCACCGGACGACGCAGGAAAAGGTATCAATCGTGCTGCCCATCGTGGGAACAACTGTCCTGCTCACACGTGTGAAGCCCTGGCAACGCTCCCGGTGATCGCGCCAAGCTTCAACGTGT < 1:2290300/150‑1 CTGCACTCATCACCGGACGACGCAGGAAAAGGTATCAATCGTGCTGCCCATCGTGGGAACAACTGTCCTGCTCACACGTGTGAAGCCCTGGCAACGCTCCCGGTGATCGCGCCAAGCTTCAAC < 2:865278/123‑1 CTGCACTCATCACCGGACGACGCAGGAAAAGGTATCAATCGTGCTGCCCATCGTGGGAACAACTGTCCTGCTCACACGTGTGAAGCCCTGGCAACGCTCCCGGTGATCGCGCCAAGCTTCAAC > 1:865278/1‑123 TCGTGGGAACAACTGTCCTGCTCACACGTGTGAAGCCCTGGCAACGCTCCCGGTGATCGCGCCAAGCTTCAACGT < 1:216851/75‑1 TCGTGGGAACAACTGTCCTGCTCACACGTGTGAAGCCCTGGCAACGCTCCCGGTGATCGCGCCAAGCTTCAACGT > 2:216851/1‑75 CACACGTGTGAAGCCCTGGCAACGCTCCCGGTGATCGCGCCAAGCTTCAACGTGTGAGCAGGACAGTTGTTCCCACGATGGGCAGCACGATTGATACCTTTTCCTGCGTCGTCCGGTGATGAGTGCAGAACCTTCATTTCTGCACCCACA > 1:1760360/1‑150 caACGTGTGAAGCCCTGGCAACGCTCCCGGTGATCGCGCCAAGCTTCAACGTGTGAGCAGGACAGTTGTTCCCACGATGGGCAGCACGATTGATACCTTTTCCTGCGTCGTCCGGTGATGAGTGCAGAACCTTCATTTCTGCACCCACAG > 1:462010/3‑150 ACACGTGTGAAGCCCTGGCAACGCTCCCGGTGATCGCGCCAAGCTTCAACGTGTGAGCAGGACAGTTGTTCCCACGATGGGCAGCACGATTGATACCTTTTCCTGCGTCGTCCGGTGATGAGTGCAGAACCTTCATTTCTGCTCCCACAG < 1:695549/150‑1 ACACGTGTGAAGCCCTGGCAACGCTCCCGGTGATCGCGCCAAGCTTCAACGTGTGAGCAGGACAGTTGTTCCCACGATGGGCAGCACGATTGATACCTTTTCCTGCGTCGTCCGGTGATGAGTGCAGAACCTTCATTTCTGCACCCACAG > 1:749703/1‑150 ACACGTGTGAAGCCCTGGCAACGCTCCCGGTGATCGCGCCAAGCTTCAACGTGTGAGCAGGACAGTTGTTCCCACGATGGGCAGCACGATTGATACCTTTTCCTGCGTCGTCCGGTGATGAGTGCAGAACCTTCATTTCTGCACCCACAG > 2:1143602/1‑150 ACACGTGTGAAGCCCTGGCAACGCTCCCGGTGATCGCGCCAAGCTTCAACGTGTGAGCAGGACAGTTGTTCCCACGATGGGCAGCACGATTGATACCTTTTCCTGCGTCGTCCGGTGATGAGTGCAGAACCTTCATTTCTGCACCCACAG > 2:2381793/1‑150 CACGTGTGAAGCCCTGGCAACGCTCCCGGTGATCGCGCCAAGCTTCAACGTGTGAGCAGGACAGTTGTTCCCACGATGGGCAGCACGATTGATACCTTTTCCTGCGTCGTCCGGTGATGAGTGCAGAACCTTCATTTCTGCACCCACAGG > 1:1590509/1‑150 GTGTGAAGCCCTGGCAACGCTCCCGGTGATCGCGCCAAGCTTCAACGTGTGAGCAGGACAGTTGTTCCCACGATGGGCAGCACGATT > 1:1329564/1‑87 GTGTGAAGCCCTGGCAACGCTCCAGGTGATCGCGCCAAGCTTCAACGTGTGAGCAGGACAGTTGTTCCCACGATGGGCAGCACGATT < 2:1329564/87‑1 TGTGAAGCCCTGGCAACGCTCCCGGTGATCGCGCCAAGCTTCAACGTGTGAGCAGGACAGTTGTTCCCACGATGGGCAGCACGATTGATACCTTTTCCTGCGTCGTCCGGTGATGAGTGCAGAACCTTCATTTCTGCACCCACAGGACCC < 2:158991/150‑1 GCTTAGGGCCTTCAAAGGCAAGCGGTACGGCTGGCGAGGCGTCATGCGTGGGTCCTGTGGGTGCAGAAATGAAGGTTCTGCACTCATCACCGGACGACGCAGGAAAAGGTATCAATCGTGCTGCCCATCGTGGGAACAACTGTCCTGCTCACACGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3472488‑3472643‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacacgtGTGAAGCCCTGGCAACGCTCCCGGTGATCGCGCCAAGCTTCAACGTGTGAGCAGGACAGTTGTTCCCACGATGGGCAGCACGATTGATACCTTTTCCTGCGTCGTCCGGTGATGAGTGCAGAACCTTCATTTCTGCACCCACAGGACCC < NC_002947/3472685‑3472537 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |