New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3650560 | 86 (0.920) | 5 (0.060) | 4/238 | NT | 5.5% | coding (306/609 nt) | PP_3216 | cysteine dioxygenase |
? | NC_002947 | = 3650570 | 89 (1.000) | coding (296/609 nt) | PP_3216 | cysteine dioxygenase |
ATTGCTCACCTGATGAATGTCGCCGATGCGCGGCGACACCGCTTCCACCTGGCCGGGCACCAGACGGATGGGGGCCCCCTCTTGCAACAAAGCGCCTCTGGCGTCACGCACGAATCCCTGAGCGTGCTCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3650428‑3650560 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcaTGCTGCGCGGTGCCGAGCACGCTCAGGGATTCGTGCGTGACGCCAGAGGCGCTTTGTTGCAAGAGGGGGCCCCCATCCGTCTGGTGCCCGGCCAGGTGGAAGCGGTGTCGCCGCGCATCGGCGACATTCATCAGGTGAGCAATGCGTTC < NC_002947/3650570‑3650422 ATTGCTCACCTGATGAATGTCGCCGATGCGCGGCGACACCGCTTCCACCTGGCCGGGCACCAGACGGATGGGGGCCCCCTCTTGCAACAAAGCGCCTCTGGCGTCACGCACGAATCCCTGAGCGTGCTCGGCATGCTGCGCGGTGCCGAG < 2:1599803/150‑1 AGCGCCTCTGGCGTCACGCACGAATCCCTGAGCGTGCTCGGCATGCTGCGCGGTGCCGA > 1:1978302/1‑59 AGCGCCTCTGGCGTCACGCACGAATCCCTGAGCGTGCTCGGCATGCTGCGCGGTGCCGA < 2:1978302/59‑1 GCGTCACGCACGAATCCCTGAGCGTGCTCGGCATGCTGCGCGGTGCCGA > 1:169012/1‑49 GCGTCACGCACGAATCCCTGAGCGTGCTCGGCATGCTGCGCGGTGCCGA < 2:169012/49‑1 GCATGCTGCGCGGTGCCGAGCACGCTCAGGGATTCGTGCGTGACGCCAGAGGCGCTTTGTTGCAAGAGGGGGCCCCCATCCGTCTGGTGCCCGGCCAGGTGGAAGCGGTGTCGCCGCGCATCGGCGACATTCATCAGGTGAGCAAT < 1:800181/146‑1 GCATGCTGCGCGGTGCCGAGCACGCTCAGGGATTCGTGCGTGACGCCAGAGGCGCTTTGTTGCAAGAGGGGGCCCCCATCCGTCTGGTGCCCGGCCAGGTGGAAGCGGTGTCGCCGCGCATCGGCGACATTCATCAGGTGAGCAAT > 2:800181/1‑146 ATGCTGCGCGGTGCCGAGCACGCTCAGGGATTCGTGCGTGACGCCAGAGGCGCTTTGTTGCAAGAGGGGGCCCCCATCCGTCTGGTGCCCGGCCAGGTGGAAGCGGTGTCGCCGCGCATCGGCGACATTCATCAGGTGAGCAATGCGTTC < 1:2257893/150‑1 ATGCTGCGCGGTGCCGAGCACGCTCAGGGATTCGTGCGTGACGCCAGAGGCGCTTTGTTGCAAGAGGGGGCCCCCATCCGTCTGGTGCCCGGCCAGGTGGAAGCGGTGTCGCCGCGCATCGGCGACATTCATCAGGTGAGCAATGCGTTC < 1:994542/150‑1 ATTGCTCACCTGATGAATGTCGCCGATGCGCGGCGACACCGCTTCCACCTGGCCGGGCACCAGACGGATGGGGGCCCCCTCTTGCAACAAAGCGCCTCTGGCGTCACGCACGAATCCCTGAGCGTGCTCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3650428‑3650560 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcaTGCTGCGCGGTGCCGAGCACGCTCAGGGATTCGTGCGTGACGCCAGAGGCGCTTTGTTGCAAGAGGGGGCCCCCATCCGTCTGGTGCCCGGCCAGGTGGAAGCGGTGTCGCCGCGCATCGGCGACATTCATCAGGTGAGCAATGCGTTC < NC_002947/3650570‑3650422 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |