New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3659491 | 87 (0.930) | 7 (0.080) | 4/244 | NT | 7.8% | coding (418/1620 nt) | PP_3223 | ABC transporter substrate‑binding protein |
? | NC_002947 | = 3659530 | 81 (0.890) | coding (379/1620 nt) | PP_3223 | ABC transporter substrate‑binding protein |
CCCAGCGAGCGTTGCTGCGCGCTCAACCGGTACGAGGCCGGGGCGAGAATGGCCAGGTTGGTGGTGGACGTGGCCTGAAGGAAACCCGCGTTGGGTTTTGCCAGGACCAGGCGCACGGTGAAGTCGTCGATCACCTCGGCGTGGTCGTAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3659340‑3659491 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccAGCCAGTTGCCGGCCACCTTCGGTGCCACCTACCTGGCCGGCTACGACCACGCCGAGGTGATCGACGACTTCACCGTGCGCCTGGTCCTGGCAAAACCCAACGCGGGTTTCCTTCAGGCCACGTCCACCACCAACCTGGCCATT < NC_002947/3659530‑3659387 CCCAGCGAGCGTTGCTGCGCGCTCAACCGGTACGAGGCCGGGGCGAGAATGGCCAGGTTGGTGGTGGACGTGGCCTGAAGGAAACCCGCGTTGGGTTTTGCCAGGACCAGGCGCACGGTGAAGTCGTCGATCACCTCGGCGTGGTCGTAG < 1:506316/150‑1 CCCAGCGAGCGTTGCTGCGCGCTCAACCGGTACGAGGCCGGGGCGAGAATGGCCAGGTTGGTGGTGGACGTGGCCTGAAGGAAACCCGCGTTGGGTTTTGCCAGGACCAGGCGCACGGTGAAGTCGTCGATCACCTCGGCGTGGTCGTAG < 2:442622/150‑1 CCGGTACGAGGCCGGGGCGAGAATGGCCAGGTTGGTGGTGGACGTGGCCTGAAGGAAACCCGCGTTGGGTTTTGCCAGGACCAGGCGCACGGTGAAGTCGTCGATCACCTCGGCGTGGTCGTAGCCGGCCAGTTGCCGGCCACCTTCGGT < 2:539189/150‑1 GCGAGAATGGCCAGGTTGGTGGTGGACGTGGCCTGAAGGAAACCCGCGTTGGGTTTTGCCAGGACCAGGCGCACGGTGAAGTCGTCGATCACCTCGGCGTGGTCGTAGCTAGACCGTTGCCGGCCACCTTCGGTGCCACCTACCTGGCCG < 1:789977/150‑1 GCGAGAATGGCCAGGTTGGTGGTGGACGTGGCCTGAAGGAAACCCGCGTTGGGTTTTGCCAGGACCAGGCGCACGGTGAAGTCGTCGATCACCTCGGCGTGGTCGTAGCCAGCCAGTTGCCGGCCACCTTCGGTGCCACCTACCTGGCCG < 1:788787/150‑1 GTGGTGGACGTGGCCTGAAGGAAACCCGCGTTGGGTTTTGCCAGGACCAGGCGCACGGTGAAGTCGTCGATCACCTCGGCGTGGTCGTAGCCAGCCAGTTGCCGGCCACCTTCGGTGCCACCTACCTGGCCGGCTA < 1:1660354/136‑1 GTGGTGGACGTGGCCTGAAGGAAACCCGCGTTGGGTTTTGCCAGGACCAGGCGCACGGTGAAGTCGTCGATCACCTCGGCGTGGTCGTAGCCAGCCAGTTGCCGGCCACCTTCGGTGCCACCTACCTGGCCGGCTA < 1:465833/136‑1 GTGGTGGACGTGGCCTGAAGGAAACCCGCGTTGGGTTTTGCCAGGACCAGGCGCACGGTGAAGTCGTCGATCACCTCGGCGTGGTCGTAGCCAGCCAGTTGCCGGCCACCTTCGGTGCCACCTACCTGGCCGGCTA > 2:1660354/1‑136 GTGGTGGACGTGGCCTGAAGGAAACCCGCGTTGGGTTTTGCCAGGACCAGGCGCACGGTGAAGTCGTCGATCACCTCGGCGTGGTCGTAGCCAGCCAGTTGCCGGCCACCTTCGGTGCCACCTACCTGGCCGGCTA > 2:465833/1‑136 ttcaCCAGCCAGTTGCCGGCCACCTTCGGTGCCACCTACCTGGCCGGCTACGACCACGCCGAGGTGATCGACGACTTCACCGTGCGCCTGGTCCTGGCAAAACCCAACGCGGGTTTCCTTCAGGCCACGTCCACCACCAACCTGGCCATT > 2:1478772/5‑150 CCCAGCGAGCGTTGCTGCGCGCTCAACCGGTACGAGGCCGGGGCGAGAATGGCCAGGTTGGTGGTGGACGTGGCCTGAAGGAAACCCGCGTTGGGTTTTGCCAGGACCAGGCGCACGGTGAAGTCGTCGATCACCTCGGCGTGGTCGTAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3659340‑3659491 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccAGCCAGTTGCCGGCCACCTTCGGTGCCACCTACCTGGCCGGCTACGACCACGCCGAGGTGATCGACGACTTCACCGTGCGCCTGGTCCTGGCAAAACCCAACGCGGGTTTCCTTCAGGCCACGTCCACCACCAACCTGGCCATT < NC_002947/3659530‑3659387 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |