New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3854830 = | 70 (0.750) | 4 (0.050) | 4/238 | NT | 5.8% | coding (417/888 nt) | PP_3403 | quercetin 2,3‑dioxygenase |
? | NC_002947 | 3854861 = | 63 (0.710) | coding (386/888 nt) | PP_3403 | quercetin 2,3‑dioxygenase |
ATCGGTCCAGGTGACGTGCAGTGGATGACGGCGGCCAACGGCATCATTCATGAGGAGTTTCATTCCCCCGACTTTGCACGCAGTGGCGGCACGCTGGAAATGGTCCAGCTGTGGGTGAACCTGCCGGCGCGGGACAAGCGTGCAGCGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3854982‑3854830 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTGCGTGCAAAGTCGGGGGAATGAAACTCCTCATGAATGATGCCGTTGGCCGCCGTCATCCACTGCACGTCACCTGGACCGATCAACCCGCCAGCACCGGTGGAATCAC > NC_002947/3854861‑3855008 ATCGGTCCAGGTGACGTGCAGTGGATGACGGCGGCCAACGGCATCATTCATGAGGAGTTTCATTCCCCCGACTTTGCACGCAGTGGCGGCACGCTGGAAATGGTCCAGCTGGGGGTGAACCTGCCGGCGCGGGACAAGCGTGCAGCGGCC > 1:1202886/1‑150 CGGTCCAGGTGACGTGCAGTGGATGACGGCGGCCAACGGCATCATTCATGAGGAGTTTCATTCCCCCGACTTTGCACGCAGTGGCGGCACGCTGGAAATGGTCCAGCTGTGGGTGAACCTGCCGGCGCGGGACAAGCGTGCAGCGGCCGG > 1:377786/1‑150 AGGAGTTTCATTCCCCCGACTTTGCACGCAGTGGCGGCACGCTGGAAATGGTCCAGCTGTGGGTGAACCTGCCGGCGCGGGACAAGCGTGCAGCGGC > 1:712272/1‑97 AGGAGTTTCATTCCCCCGACTTTGCACGCAGTGGCGGCACGCTGGAAATGGTCCAGCTGTGGGTGAACCTGCCGGCGCGGGACAAGCGTGCAGCGGC < 2:712272/97‑1 CTGCCGGCGCGGGACAAGCGTGCAGCGGCCGGCAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTG < 1:2017897/75‑1 CTGCCGGCGCGGGACAAGCGTGCAGCGGCCGGCAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTG > 2:2017897/1‑75 GGCGCGGGACAAGCGTGCAGCGGCCGGCAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTGCGTGCAAAGTCGGGGGAA > 1:1807815/1‑88 GGCGCGGGACAAGCGTGCAGCGGCCGGCAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTGCGTGCAAAGTCGGGGGAA < 2:1807815/88‑1 CGGCAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTGCGTGCAAAGTCGGGGGAATGAAACTCCTCATGAATGATGCCGTTGGCCGCCGTCATCCACTGCACGTCACCTGGACCGATCAACCCGCCAGCACCGGTGGAATC > 1:830127/1‑150 GCAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTGCGTGCAAAGTCGGGGGAATGAAACTCCTCATGAATGATGCCGTTGGCCGCCGTCATCCACTGCACGTCACCTGGACCGATCAACCCGCCAGCACCGGTGGAATCAC > 1:2180994/1‑150 GCAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTGCGTGCAAAGTCGGGGGAATGAAACTCCTCATGAATGATGCCGTTGGCCGCCGTCATCCACTGCACGTCACCTGGACCGATCAACCCGCCAGCACCGGTGGAATCAC < 2:1869870/150‑1 ATCGGTCCAGGTGACGTGCAGTGGATGACGGCGGCCAACGGCATCATTCATGAGGAGTTTCATTCCCCCGACTTTGCACGCAGTGGCGGCACGCTGGAAATGGTCCAGCTGTGGGTGAACCTGCCGGCGCGGGACAAGCGTGCAGCGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3854982‑3854830 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTGCGTGCAAAGTCGGGGGAATGAAACTCCTCATGAATGATGCCGTTGGCCGCCGTCATCCACTGCACGTCACCTGGACCGATCAACCCGCCAGCACCGGTGGAATCAC > NC_002947/3854861‑3855008 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |