New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3919334 | 76 (0.810) | 7 (0.080) | 7/232 | NT | 8.8% | coding (3072/3129 nt) | mexB | multidrug resistance protein MexB |
? | NC_002947 | = 3919346 | 75 (0.870) | coding (3084/3129 nt) | mexB | multidrug resistance protein MexB |
GCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3919182‑3919334 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcgcctgGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGATGGCCAGGGGCAC < NC_002947/3919346‑3919200 GCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGC < 1:1338094/150‑1 TTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTG > 2:1468552/1‑150 TGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGCATC < 1:1802918/150‑1 CAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGC > 1:2056596/1‑129 CAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGC < 2:2056596/129‑1 GCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGCAT > 2:2379366/1‑104 GCACCGGGGTGATCGGCGGCATGCTCAGCGACACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGCAT < 1:2379366/104‑1 TGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGCATCACC > 1:385707/1‑99 TGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGCATCACC < 2:385707/99‑1 ATGCGCCTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGATGGCCAG > 1:183672/1‑150 TGCGCCTGGCGTCGCCCGGACAGGCGCATCACCACCAAGAGGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGATGGCCAGG < 1:1839419/150‑1 GCGCCTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGG > 1:2350421/1‑68 GCGCCTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGG < 2:2350421/68‑1 CTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGATGGCCAGGGGCAC > 2:1163431/1‑150 CTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGAAGGCCAGGGGCAC > 2:135426/1‑150 GCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3919182‑3919334 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcgcctgGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGATGGCCAGGGGCAC < NC_002947/3919346‑3919200 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |