| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4202409 = | 83 (0.890) | 4 (0.050) | 4/234 | NT | 5.0% | coding (5411/6624 nt) | PP_3691 | DNA helicase‑related protein |
| ? | NC_002947 | 4202451 = | 73 (0.840) | coding (5369/6624 nt) | PP_3691 | DNA helicase‑related protein | |||||
CTAGAAAGTGTCCAGGGCGACGAGCGAGACATCATTTACTTCTCGACCACCTACGGGAAAGATGCTGCCGGGGTTATGTCAATGAACTTTGGCCCTATGAATCGTCCAGGTGGCGAGCGTCGACTAAACGTTGCGATCACGCGGGCTCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4202560‑4202409‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgccaCCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTCCCGTAGGTGGTCGAGAAGTAAATGATGTCTCGCTCGTCGCCCTGGACACTTTCTAGGTTCTTCACGAACACAGGCTCGAGCTCAGACTCAGCG > NC_002947/4202451‑4202597 CTAGAAAGTGTCCAGGGCGACGAGCGAGACATCATTTACTTCTCGACCACCTACGGGAAAGATGCTGCCGGGGTTATGTCAATGAACTTTGGCCCTATGAATCGTCCAGGTGGCGAGCGTCGACTAAACGTTGCGATCACGCGGGCTCGC > 1:1620808/1‑150CTAGAAAGTGTCCAGGGCGACGAGCGAGACATCATTTACTTCTCGACCACCTACGGGAAAGATGCTGCCGGGGTTATGTCAATGAACTTTGGCCCTATGAATCGTCCAGGTGGCGAGCGTCGACTAAACGTTGCGATCACGCGGGCTCGC > 2:1417407/1‑150 TAGAAAGTGTCCAGGGCGACGAGCGAGACATCATTTACTTCTCGACCACCTACGGGAAAGATGCTGCCGGGGTTATGTCAATGAACTTTGGCCCTATGAATCGTCCAGGTGGCGAGCGTCGACTAAACGTTGCGATCACGCGGGCTCGCC > 1:1700055/1‑150 AGAAAGTGTCCAGGGCGACGAGCGAGACATCATTTACTTCTCGACCACCTACGGGAAAGATGCTGCCGGGGTTATGTCAATGAACTTTGGCCCTATGAATCGTCCAGGTGGCGAGCGTCGACTAAACGTTGCGATCACGCGGGCTCGCCA > 2:2015901/1‑150 GTGGCGAGCGTCGACTAAACGTTGCGATCACGCGGGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTCCCGTAGGTGGTCGAGAAGTAAATGATGTCTCGCTCGTCGCCCTGGACACTTTC > 1:2145072/1‑150 GCGAGCGTCGACTAAACGTTGCGATCACGCGGGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTCCCGTAGGTGGTCGAGAAGTAAATGATGTCTCGC > 1:1825206/1‑127 GCGAGCGTCGACTAAACGTTGCGATCACGCGGGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTCCCGTAGGTGGTCGAGAAGTAAATGATGTCTCGC < 2:1825206/127‑1 TGCGATCACGCGGGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTCCCGTAGGTGGTCGAGAAGTAAATGATGTCTCGCTCGTCGCCCTGGACACTTTCTAGGTTCTTCACGAACACAGGC < 2:2145072/150‑1 TCGCCACCTGGACGTTTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTCCCGTAGGTGGTCGAGAAGTAAATGATGTCTCGCTCGTCGCCCTGGACACTTTCTAGGTTCTTCACGAACACAGGCTCGAGCTC > 2:1215452/1‑143 TCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTCCCGTAGGTGGTCGAGAAGTAAATGATGTCTCGCTCGTCGCCCTGGACACTTTCTAGGTTCTTCACGAACACAGGCTCGAGCTC < 1:1215452/143‑1 CCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTCCCGTAGGTGGTCGAGAAGTAAATGATGTCTCGCTCGTCGCCCTGGACACTTTCTAGGTTCTTCACGAACACAGGCTCGAGCTCAGACTCAGCG > 1:964233/1‑150 CTAGAAAGTGTCCAGGGCGACGAGCGAGACATCATTTACTTCTCGACCACCTACGGGAAAGATGCTGCCGGGGTTATGTCAATGAACTTTGGCCCTATGAATCGTCCAGGTGGCGAGCGTCGACTAAACGTTGCGATCACGCGGGCTCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4202560‑4202409‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgccaCCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTCCCGTAGGTGGTCGAGAAGTAAATGATGTCTCGCTCGTCGCCCTGGACACTTTCTAGGTTCTTCACGAACACAGGCTCGAGCTCAGACTCAGCG > NC_002947/4202451‑4202597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |