New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4340085 =	43 (0.460)	18 (0.260)	9/182	NT	46.6%	intergenic (+26/‑305)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
	?	NC_002947	4340169 =	10 (0.150)					intergenic (+110/‑221)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein

TCAAGGTCTACGGGATATCATATTATGGTATTCCAAGATTTTGGCAAGAGGTATGGGGCGACCGGCCATCACTCCGCCCTGTCAAAAGCACCAAGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4340262‑4340085 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcattcgcgggtaaacccgctcctacagggcccTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGGCACCTACAATTAAAAACGGCCACCAGAACACTTTGTTTTAG  >  NC_002947/4340169‑4340316                                                                                                                                                                                                                                                                                                                                        TCAAGGTCTACGGGATATCATATTATGGTATTCCAAGATTTTGGCAAGAGGTATGGGGCGACCGGCCATCACTCCGCCCTGTCAAAAGCACCAAGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATT                                                                                                                                                                                  <  2:1459673/150‑1   AAGGTCTACGGGATATCATATTATGGTATTCCAAGATTTTGGCAAGAGGTATGGGGCGACCGGCCATCACTCCGCCCTGTCAAAAGCACCAAGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCG                                                                                                                                                                                <  2:643689/150‑1      GTCTACGGGATATCATATTATGGTATTCCAAGATTTTGGCAAGAGGTATGGGGCGACCGGCCATCACTCCGCCCTGTCAAAAGCACCAAGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGG                                                                                                                                                                             <  2:859604/150‑1      GTCTACGGGATATCATATTATGGTATTCCAAGATTTTGGCAAGAGGTATGGGGCGACCGGCCATCACTCCGCCCTGTCAAAAGCACCAAGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGG                                                                                                                                                                             <  1:585274/150‑1      GTCTACGGGATATCATATTATGGTATTCCAAGATTTTGGCAAGAGGTATGGGGCGACCGGCCATCACTCCGCCCTGTCAAAAGCACCAAGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGG                                                                                                                                                                             <  1:339999/150‑1      GTCTACGGGATATCATATTATGGTATTCCAAGATTTTGGCAAGAGGTATGGGGCGACCGGCCATCACTCCGCCCTGTCAAAAGCACCAAGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGG                                                                                                                                                                             <  1:107412/150‑1                            GTATTCCAAGATTTTGGCAAGAGGTATGGGGCGACCGGCCATCACTCCGCCCTGTCAAAAGCACCAAGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTC                                                                                                                                                                                       <  1:41439/118‑1                            GTATTCCAAGATTTTGGCAAGAGGTATGGGGCGACCGGCCATCACTCCGCCCTGTCAAAAGCACCAAGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTC                                                                                                                                                                                       >  2:41439/1‑118                                   AAGATTTTGGCAAGAGGTATGGGGCGACCGGCCATCACTCCGCCCTGTCAAAAGTACCAAGCGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGG                                                                                                                                                                             <  2:709414/121‑1                                   AAGATTTTGGCAAGAGGTATGGGGCGACCGGCCATCACTCCGCCCTGTCAAAAGCACCAAGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGG                                                                                                                                                                             >  1:709414/1‑121                                                                                              AGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACC                                                                                                                                                                      <  2:1818709/69‑1                                                                                              AGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACC                                                                                                                                                                      >  1:1818709/1‑69                                                                                                                      CCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAC                                                             >  1:1268298/1‑150                                                                                                                      CCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAC                                                             >  1:1836396/1‑150                                                                                                                      CCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTG                                                                                         <  1:2296455/122‑1                                                                                                                      CCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTG                                                                                         >  2:2296455/1‑122                                                                                                                      CCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTG                                                                                         >  1:453110/1‑122                                                                                                                      CCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTG                                                                                         <  2:453110/122‑1                                                                                                                      CCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGG                                                                                                                     >  2:189325/1‑94                                                                                                                      CCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGG                                                                                                                     <  1:189325/94‑1                                                                                                                      CCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCG                                                                                                                      <  1:1997685/93‑1                                                                                                                      CCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCG                                                                                                                      >  2:1453900/1‑93                                                                                                                      CCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCG                                                                                                                      >  2:1997685/1‑93                                                                                                                      CCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCG                                                                                                                      <  1:1453900/93‑1                                                                                                                      CCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACA                                                                                                                                                            >  1:2105573/1‑55                                                                                                                      CCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACA                                                                                                                                                            <  2:2105573/55‑1                                                                                                                        GCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTG                                                                                         >  2:377324/1‑120                                                                                                                        GCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTG                                                                                         <  1:377324/120‑1                                                                                                                          GAATGCGTCGGTGGTGTCACCCTCGCATTCTCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTG                                                         >  1:1771820/1‑150                                                                                                                            agGCGTCGGTGCTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGT                                                                                                                                                 <  1:2123611/58‑1                                                                                                                            ATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAG                                                       >  1:113306/1‑150                                                                                                                            ATGCGTCGGTGCTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGT                                                                                                                                                 >  2:2123611/1‑60                                                                                                                             TGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATA                                                                            <  1:1360242/128‑1                                                                                                                             TGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATA                                                                            >  2:1360242/1‑128                                                                                                                                                TCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGGCACCTACA                                   >  2:1789796/1‑150                                                                                                                                                  GCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGGCACCTACAAT                                 >  2:1953370/1‑150                                                                                                                                                   CATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCT                                                                                           <  2:1364388/91‑1                                                                                                                                                   CATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCT                                                                                           >  1:1364388/1‑91                                                                                                                                                    ATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGGCACCTACAATTA                               >  1:1348262/1‑150                                                                                                                                                     TTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTT                                                                                                     <  2:1018099/79‑1                                                                                                                                                     TTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTT                                                                                                     >  1:1018099/1‑79                                                                                                                                                        GCGGGTTTACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGGCACCTACAATTAAAAA                           <  1:651978/150‑1                                                                                                                                                         CGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGGCACCTACAATTAAAAAC                          <  2:1771820/150‑1                                                                                                                                                          GGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATC                                                                     <  2:1274378/106‑1                                                                                                                                                          GGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATC                                                                     >  1:1274378/1‑106                                                                                                                                                            GTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGGCACCTACAATTAAAAACGGC                       <  1:629719/150‑1                                                                                                                                                                  CCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGGCACCTACAATTAAAAACGGCCACCAG                 >  1:1441312/1‑150                                                                                                                                                                            AGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGGCACCTACAATTAAAAACGGCCACCAGAACACTTTGT       >  2:2252426/1‑150                                                                                                                                                                              GGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGGCACCTACAA                                  >  2:1031451/1‑121                                                                                                                                                                              GGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGGCACCTACAA                                  <  1:1031451/121‑1                                                                                                                                                                               GCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGGCACCTACAATTAAAAACGGCCACCAGAACACTTTGTTTT    >  2:741729/1‑150                                                                                                                                                                                CCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGGCACCTACAATTAAAAACGGCCACCAGAACACTTTGTTTTA   >  1:694246/1‑150                                                                                                                                                                                CCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGGCACCTACAATTAAAAACGGCCACCAGAACACTTTGTTTTA   <  1:1953370/150‑1                                                                                                                                                                                 CCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGGCACCTACAATTAAAAACGGCCACCAGAACACTTTGTTTTAG  >  1:2070096/1‑150                                                                                                                                                                                                                                                                                                                                        TCAAGGTCTACGGGATATCATATTATGGTATTCCAAGATTTTGGCAAGAGGTATGGGGCGACCGGCCATCACTCCGCCCTGTCAAAAGCACCAAGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAACCCGCTCCTACAGGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4340262‑4340085 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcattcgcgggtaaacccgctcctacagggcccTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGGCACCTACAATTAAAAACGGCCACCAGAACACTTTGTTTTAG  >  NC_002947/4340169‑4340316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.