| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4511103 | 59 (0.630) | 6 (0.070) | 5/234 | NT | 9.5% | coding (730/1326 nt) | rarA | DNA‑dependent ATPase |
| ? | NC_002947 | = 4511114 | 59 (0.680) | coding (719/1326 nt) | rarA | DNA‑dependent ATPase | |||||
CTCGCTGGCCATGCGCACCACGCGGCGGGCGATGTACAGCGGGTCACAGCCGCCGTCGAGCATCCGTGCAAACCAGTACAGGGCGCCATCGGGATTGGAGCCACGCACCGACTTGTGCAGCGCGGATATCTGGTCGTAGAACGCCTCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4510951‑4511103‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccgccGCTTCGACAAAGGCGGCGAGGCGTTCTACGACCAGATATCCGCGCTGCACAAGTCGGTGCGTGGCTCCAATCCCGATGGCGCCCTGTACTGGTTTGCACGGATGCTCGACGGCGGCTGTGACCCGCTGTACATCGCCCGCCGCGTGGT < NC_002947/4511114‑4510967 CTCGCTGGCCATGCGCACCACGCGGCGGGCGATGTACAGCGGGTCACAGCCGCCGTCGAGCATCCGTGCAAACCAGTACAGGGCGCCATCGGGATTGGAGCCACGCACCGACTTGTGCGGCGCCGCTGTCCTGTCGCAGGACGCCACGCC > 2:1720477/1‑150CTCGCTGGCCATGCGCACCACGCGGCGGGCGATGTACAGCGGGTCACAGCCGCCGTCGAGCATCCGTGCAAACCAGTACAGGGCGCCATCGGGATTGGAGCCACGCACCGACTTGTGCAGCGCGGATATCTGGTCGTAGAACGCCTCGCC > 1:1094748/1‑150CTCGCTGGCCATGCGCACCACGCGGCGGGCGATGTACAGCGGGTCACAGCCGCCGTCGAGCATCCGTGCAAACCAGTACAGGGCGCCATCGGGATTGGAGCCACGCACCGACTTGTGCAGCGCGGATATCTGGTCGTAGAACGCCTCGCC > 2:425925/1‑150CTCGCTGGCCATGCGCACCACGCGGCGGGCGATGTACAGCGGGTCACAGCCGCCGTCGAGCATCCGTGCAAACCAGTACAGGGCGCCATCGGGATTGGAGCCACGCACCGACTTGTGCAGCGCGGATATCTGGTCGTAGAACGCCTCGCC > 1:314789/1‑150 TCGCTGGCCATGCGCACCACGCGGCGGGCGATGTACAGCGGGTCACAGCCGCCGTCGAGCATCCGTGCAAACCAGTACAGGGCGCCATCGGGATTGGAGCCACGCACCGACTTGTGCAGCGCGGATATCTGGTCGTAGAACGCCTCGCCG < 2:1462261/150‑1 CGCTGGCCATGCGCACCACGCGGCGGGCGATGTACAGCGGGTCACAGCCGCCGTCGAGCATCCGTGCAAACCAGTACAGGGCGCCATCGGGATTGGAGCCACGCACCGACTTGTGCAGCGCGGATATCTGGTCGTAGAACGCCTCGCCGC < 1:1362744/150‑1 GCTGGCCATGCGCACCACGCGGCGGGCGATGTACAGCGGGTCACAGCCGCCGTCGAGCATCCGTGCAAACCAGTACAGGGCGCCATCGGGATTGGAGCCACGCACCGACTTGTGCAGCGCGGATATCTGGTCGTAGAACGCCTCGCCGCC > 2:337476/1‑150 GGCGGGCGATGTACAGCGGGTCACAGCCGCCGTCGAGCATCCGTGCAAACCAGTACAGGGCGCCATCGGGATTGGAGCCACGCACCGACTTGTGCAGCGCGGATATCTGGTCGTAGAACGCCTCGCCGCCGCTTCGACAAAGGCGGCGAG < 2:1055929/150‑1 GCGGGCGATGTACAGCGGGTCACAGCCGCCGTCGAGCATCCGTGCAAACCAGTACAGGGCGCCATCGGGATTGGAGCCACGCACCGACTTGTGCAGCGCGGATATCTGGTCGTAGAACGCCTCGCCGCCGCTTCGACAAAGGCGGCGAGG < 1:2266984/150‑1 TACAGGGCGCCATCGGGATTGGAGCCACGCACCGACTTGTGCAGCGCGGATATCTGGTCGTAGAACGCCTCGCCGCCGCTTCGACAAAGGCGGCGAGG < 1:1099906/98‑1 TACAGGGCGCCATCGGGATTGGAGCCACGCACCGACTTGTGCAGCGCGGATATCTGGTCGTAGAACGCCTCGCCGCCGCTTCGACAAAGGCGGCGAGG > 2:1099906/1‑98 ATCGGGATTGGAGCCACGCACCGACTTGTGCAGCGCGGATATCTGGTCGTAGAACGCCTCGCCGCCGCTTCGACAAAGGCGGCGA > 1:1960129/1‑85 ATCGGGATTGGAGCCACGCACCGACTTGTGCAGCGCGGATATCTGGTCGTAGAACGCCTCGCCGCCGCTTCGACAAAGGCGGCGA < 2:1960129/85‑1 CCGCCGCTTCGACAAAGGCGGCGAGGCGTTCTACGACCAGATATCCGCGCTGCACAAGTCGGTGCGTGGCTCCAATCCCGATGGCGCCCTGTACTGGTTTGCACGGATGCTCGACGGCGGCTGTGACCCGCTGTACATCGCCCGCCGCGT > 2:720153/1‑150 CCGCCGCTTCGACAAAGGCGGCGAGGCGTTCTACGACCAGATATCCGCGCTGCACAAGTCGGTGCGTGGCTCCAATCCCGATGGCGCCCTGTACTGGTTTGCACGGATGCTCGACGGCGGCTGTGACCCGCTGTACATCGCCCGCCGCGT < 1:359482/150‑1 CGCCGCTTCGACAAAGGCGGCGAGGCGTTCTACGACCAGATATCCGCGCTGCACAAGTCGGTGCGTGGCTCCAATCCCGATGGCGCCCTGTACTGGTTTGCACGGATGCTCGACGGCGGCTGTGACCCGCTGTACATCGCCCGCCGCGTG > 1:1523001/1‑150 GCCGCTTCGACAAAGGCGGCGAGGCGTTCTACGACCAGATATCCGCGCTGCACAAGTCGGTGCGTGGCTCCAATCCCGATGGCGCCCTGTACTGGTTTGCACGGATGCTCGACGGCGGCTGTGACCCGCTGTACATCGCCCGCCGCGTGG > 1:1720477/1‑150 CCGCTTCGACAAAGGCGGCGAGGCGTTCTACGACCAGATATCCGCGCTGCACAAGTCGGTGCGTGGCTCCAATCCCGATGGCGCCCTGTACTGGTTTGCACGGATGCTCGACGGCGGCTGTGACCCGCTGTACATCGCCCGCCGCGTGGT < 1:1545503/150‑1 CTCGCTGGCCATGCGCACCACGCGGCGGGCGATGTACAGCGGGTCACAGCCGCCGTCGAGCATCCGTGCAAACCAGTACAGGGCGCCATCGGGATTGGAGCCACGCACCGACTTGTGCAGCGCGGATATCTGGTCGTAGAACGCCTCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4510951‑4511103‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccgccGCTTCGACAAAGGCGGCGAGGCGTTCTACGACCAGATATCCGCGCTGCACAAGTCGGTGCGTGGCTCCAATCCCGATGGCGCCCTGTACTGGTTTGCACGGATGCTCGACGGCGGCTGTGACCCGCTGTACATCGCCCGCCGCGTGGT < NC_002947/4511114‑4510967 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |