New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5474992 = | 84 (0.900) | 6 (0.070) | 5/232 | NT | 7.8% | intergenic (‑150/‑156) | proA/PP_4812 | gamma‑glutamyl phosphate reductase/3‑methyladenine DNA glycosylase |
? | NC_002947 | 5475062 = | 64 (0.740) | intergenic (‑220/‑86) | proA/PP_4812 | gamma‑glutamyl phosphate reductase/3‑methyladenine DNA glycosylase |
GCGGGGCAGTTCGTGGCTGGAGAGGCGGGGATGATAGCAATGAATGGCTTAATCGAGGCTGAATTGGACGGTGATGTTGGCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5475147‑5474992 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagggccgGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCATGCCAGCCCTGCCCGACAGCTTTTTCGACCGCGACGCCCAGACCCTGGCCAAGGCCCTGCT > NC_002947/5475062‑5475209 GCGGGGCAGTTCGTGGCTGGAGAGGCGGGGATGATAGCAATGAATGGCTTAATCGAGGCTGAATTGGACGGTGATGTTGGCAGTGCCGGCCGTTCTGCATTTATGCCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAA < 2:2433585/150‑1 GCGGGGCAGTTCGTGGCTGGAGAGGCGGGGATGATAGCAATGAATGGCTTAATCGAGGCTGAATTGGACGGTGATGTTGGCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAA < 1:2119814/150‑1 CGGGGCAGTTCGTGGCTGGAGAGGCGGGGATGATAGCAATGAATGGCTTAATCGAGGCTGAATTGGACGGTGATGTTGGCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAG < 1:1018166/150‑1 GGGCAGTTCGTGGCTGGAGAGGCGGGGATGATAGCAATGAATGGCTTAATCGAGGCTGAATTGGACGGTGATGTTGGCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGG < 1:302472/150‑1 GGCAGTTCGTGGCTGGAGAGGCGGGGATGATAGCAATGAATGGCTTAATCGAGGCTGAATTGGACGGTGATGTTGGCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGC > 2:1886102/1‑150 ATGGCTTAATCGAGGCTGAATTGGACGGTGATGTTGGCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAA > 1:1040996/1‑107 ATGGCTTAATCGAGGCTGAATTGGACGGTGATGTTGGCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAA < 2:1040996/107‑1 GTTGGCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAG > 2:1726990/1‑76 GTTGGCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAG < 1:1726990/76‑1 CTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGA < 1:2063677/99‑1 CTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGA > 2:2063677/1‑99 TTTCGCGGGTAAACCCGATCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGC > 1:2033368/1‑150 CCCGCTCCTACACAAATCCCAGTGGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCATGCCAGCCCTGC > 2:246073/1‑150 CCCGCTCCTACACAAATCCCAGTGGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTG < 2:1628192/100‑1 CCCGCTCCTACACAAATCCCAGTGGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTG > 1:1628192/1‑100 AAAGGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCATGCCAGCCCTGCCCGACAGCTTTTTCGACCGCGACGCCCAGACCCTGGCCAAGG < 1:246073/150‑1 GGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCATGCCA < 1:994529/98‑1 GGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCATGCCA > 2:994529/1‑98 GCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCATGCCAGCCCTGCCCGACAGCTTTTTCGACCGCGACGCCCAGACCCTGGCCAAGGCCCTG > 1:2166333/1‑150 CGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCATGCCAGCCCTGCCCGACAGCTTTTTCGACCGCGACGCCCAGACCCTGGCCAAGGCCCTGCT > 1:188487/1‑150 GCGGGGCAGTTCGTGGCTGGAGAGGCGGGGATGATAGCAATGAATGGCTTAATCGAGGCTGAATTGGACGGTGATGTTGGCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5475147‑5474992 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagggccgGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCATGCCAGCCCTGCCCGACAGCTTTTTCGACCGCGACGCCCAGACCCTGGCCAAGGCCCTGCT > NC_002947/5475062‑5475209 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |