| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5502769 | 82 (0.880) | 5 (0.060) | 5/240 | NT | 6.1% | coding (169/432 nt) | PP_4837 | hypothetical protein |
| ? | NC_002947 | = 5502788 | 76 (0.850) | coding (188/432 nt) | PP_4837 | hypothetical protein | |||||
CACAGCATCGGCCGTACCACCCGCCCTGACCTCAGGCGCGCCGGTGGCGGATGGCTGAGCCTGTTCGCCATGTGGATGATCTTCATCGGCCCGCTGATATCCCAGTCGATGCCGATGGACCACCACGCGGGCATGAACATGCCGATGGACATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5502616‑5502769‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgcTGATGGGCAGCCG‑CCATCGGCATGTCCATCGGCATGTTCATGCCCGCGTGGTGGTCCATCGGCATCGACTGGGATATCAGCGGGCCGATGAAGATCATCCACATGGCGAACAGGCTCAGCCATCCGCCACCGGCGCGCCTGAGGTCAGG < NC_002947/5502788‑5502640 CACAGCATCGGCCGTACCACCCGCCCTGACCTCAGGCGCGCCGGTGGCGGATGGCTGAGCCTGTTCGCCATGTGGATGGCAATGATGGGCCCGCTGATATCCCAGTCGATGCCGATGGACCACCACGCGGGCATGAACATGCCGATGGAC > 1:1613991/1‑150CACAGCATCGGCCGTACCACCCGCCCTGACCTCAGGCGCGCCGGTGGCGGATGGCTGAGCCTGTTCGCCATGTGGATGATCTTCATCGGCCCGCTGATATCCCAGTCGATGCCGATGGACCACCACGCGGGCATGAACATGCCGATGGAC > 2:2124256/1‑150 CACCCGCCCTGACCTCAGGCGCGCCGGTGGCGGATGGCTGAGCCTGTTCGCCATGTGGATGATCTTCATCGGCCCGCTGATATCCCAGTCGATGCCGATGGACCACCACGCGGGCATGAACATGCCGATGGACATGCTGATGGGCAGCCG > 1:1190406/1‑150 GACCTCAGGCGCGCCGGTGGCGGATGGCTGAGCCTGTTCGCCATGTGGATGATCTTCATCGGCCCGCTGATATCCCAGTCGATGCCGATGGACCACCACGCGGGCATGAACATGCCGATGGACATGCTGATGGGCAGCCG‑CCATCGGCAT < 2:1190406/150‑1 GCCCGCTGATATCCCAGTCGATGCCGATGGACCACCACGCGGGCATGAACATGCCGATGGACATGCTGATGGGCAGCCG‑CCATCGGCATGT < 1:1659413/91‑1 GCCCGCTGATATCCCAGTCGATGCCGATGGACCACCACGCGGGCATGAACATGCCGATGGACATGCTGATGGGCAGCCG‑CCATCGGCATGT > 2:1659413/1‑91 GAACATGCCGATGGACATGCCGAT‑GGCGGCTGCCCATCAGCATGTCCATCGGCATGTTCATGCCCGCGTGGTGGTCCATCGGCATCGACTGGGATAACAGCGGGCCGATGAAGATCATCCACATGGCGAACAGGCTCAGCCATCCGCCAC > 2:1025674/1‑150 CTGATGGGCAGCCG‑CCATCGGCATGTCCATCGGCATGTTCATGCCCGCGTGGTGGTCCATCGGCATCGACTGGGATATCAGCGGGCCGATGAAGATCATCCACATGGCGAACAGGCTCAGCCATCCGCCACCGGCGCGCCTGAGGTCAGG < 1:72681/150‑1 CACAGCATCGGCCGTACCACCCGCCCTGACCTCAGGCGCGCCGGTGGCGGATGGCTGAGCCTGTTCGCCATGTGGATGATCTTCATCGGCCCGCTGATATCCCAGTCGATGCCGATGGACCACCACGCGGGCATGAACATGCCGATGGACATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5502616‑5502769‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgcTGATGGGCAGCCG‑CCATCGGCATGTCCATCGGCATGTTCATGCCCGCGTGGTGGTCCATCGGCATCGACTGGGATATCAGCGGGCCGATGAAGATCATCCACATGGCGAACAGGCTCAGCCATCCGCCACCGGCGCGCCTGAGGTCAGG < NC_002947/5502788‑5502640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |