New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5537079 = | 49 (0.530) | 10 (0.140) | 7/196 | NT | 18.3% | intergenic (+8/+95) | nadE/PP_4870 | NH(3)‑dependent NAD(+) synthetase/azurin |
? | NC_002947 | 5537155 = | 51 (0.700) | intergenic (+84/+19) | nadE/PP_4870 | NH(3)‑dependent NAD(+) synthetase/azurin |
GAAGCCGGTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5537254‑5537079 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgcgggtgaacccgctcctgcaggGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTCTCAGGCGC > NC_002947/5537155‑5537299 GAAGCCGGTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTA > 2:1611246/1‑150 CGGTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGC < 2:2144212/150‑1 GTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCTAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG < 2:778431/150‑1 GTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG < 2:76802/150‑1 GTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG < 1:3368/150‑1 GTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCAAATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG < 2:51033/150‑1 GTGGTGACTACAGCTTCTTCTGCACCCTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG < 1:2173589/150‑1 GACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAA < 2:2074708/150‑1 GACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCGCGAATACGAGGGTGAA < 2:1154652/150‑1 GACTACAGCTTCGGCGGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGGGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCGCGAATACGAGGGTGAA < 2:1154486/150‑1 TACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCg > 1:76600/1‑149 CAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGC > 1:1913069/1‑150 CAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGC > 1:1913288/1‑150 CAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGC > 1:810978/1‑150 CAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAAC > 1:2011698/1‑146 CAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAAC < 2:2011698/146‑1 TCTGCACCTTCCCGGGCCACATCTCGATGACGAAAGGCAAGGTCATCGTCAAGTAATTAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAG < 2:1753298/150‑1 TCTGCACCTTCCCGGGCCACATCTCGATGACGAAAGGCAAGGTCATCGTCAAGTAATTAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAG > 1:1753298/1‑150 CGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGG > 1:1899652/1‑121 CGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGG < 2:1899652/121‑1 GAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG > 2:95513/1‑101 GAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG < 1:95513/101‑1 TCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG < 2:2423456/76‑1 TCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG > 1:2423456/1‑76 CCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCAATTCATCATTTTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCA < 2:664921/150‑1 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCAC > 2:1781469/1‑150 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCAC > 2:1157473/1‑150 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCT > 2:694932/1‑139 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCT < 1:694932/139‑1 CGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACC > 2:1444763/1‑150 GCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCG > 2:2206905/1‑150 GCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGAT < 1:1971952/75‑1 GCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGAT > 2:1971952/1‑75 GGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAA < 1:1781469/150‑1 ATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCA > 1:1100546/1‑150 ATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCA > 2:1411955/1‑150 ggaGCGGGTTCACCCGATCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCAC > 1:1173642/4‑150 TTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCAC > 1:1910049/1‑150 GGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGG < 2:66630/150‑1 GGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGT > 2:2324628/1‑150 GGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGT > 2:2396782/1‑150 GGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGT > 1:186387/1‑150 GGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTA < 1:2333755/105‑1 GGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTA > 2:2333755/1‑105 GAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTC < 2:3368/150‑1 ACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTT < 1:2324628/150‑1 CCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGTCCCGGGAAGATGCAGAAGAAGCTGTATTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTC > 2:256860/1‑150 CCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTC > 1:1536731/1‑150 CCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTC > 2:1220648/1‑150 CCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTT < 1:270354/144‑1 CCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTT > 2:270354/1‑144 CGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTCT > 1:545097/1‑150 GCTCCTGCAGGGTCCGCCTTCAGCCGTTGATTACTTGACGATGACCGTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGTAAGTGTCGAACTTCACTTCGGTTTCTTTCTC < 2:1100546/150‑1 tcaTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTCGTCAGCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTCTCAG < 1:169567/147‑1 TGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTCTCAGGCG > 2:132951/1‑150 GCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTCTCAGGCGC > 1:366105/1‑150 GAAGCCGGTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5537254‑5537079 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgcgggtgaacccgctcctgcaggGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTCTCAGGCGC > NC_002947/5537155‑5537299 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |