| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5661091 | 99 (1.060) | 6 (0.070) | 6/230 | NT | 6.2% | coding (665/1701 nt) | ligB | DNA ligase B |
| ? | NC_002947 | = 5661120 | 91 (1.060) | coding (694/1701 nt) | ligB | DNA ligase B | |||||
GGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5660939‑5661091‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcctgttGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAGGCGCAGA < NC_002947/5661120‑5660972 GGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCCGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCT < 1:1333857/150‑1GGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGAAAGCCAAGGCAGGCAGAACTAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCT > 1:1485711/1‑150 TGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAAC > 1:556613/1‑150 GCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACA < 2:556613/150‑1 GTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCC > 2:977362/1‑150 GTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCT > 2:864391/1‑98 GTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCT < 1:864391/98‑1 GCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTT < 1:977362/150‑1 AACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTT < 1:329608/63‑1 AACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTT > 2:329608/1‑63 GGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAG < 1:889516/150‑1 GGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAG < 1:616672/150‑1 CCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGT > 1:825703/1‑80 CCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGT < 2:825703/80‑1 CTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAGGCG > 1:1483111/1‑150 GTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTCTATGTCAGGAGCTCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAGGCGCA > 1:2121906/1‑150 TTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAGGCGCAG > 2:1009540/1‑150 TGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAGGCGCAGA < 2:826323/150‑1 GGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5660939‑5661091‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcctgttGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAGGCGCAGA < NC_002947/5661120‑5660972 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |