New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5679860 = | 103 (1.100) | 6 (0.070) | 6/218 | NT | 6.7% | intergenic (+27/‑137) | bioA/rsmE | adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA/16S rRNA (uracil(1498)‑N(3))‑methyltransferase |
? | NC_002947 | 5679964 = | 78 (0.960) | intergenic (+131/‑33) | bioA/rsmE | adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA/16S rRNA (uracil(1498)‑N(3))‑methyltransferase |
GTCGATGAAGAAGCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5680023‑5679860 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaggGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGGCCGCGTGCTGCGCATGGCACCCGGCGACGCCGT > NC_002947/5679964‑5680112 GTCGATGAAGGAGCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATGCCCTGTGGGAGCCGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCG > 2:889271/1‑150 GTCGATGAAGAAGCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCG > 1:429261/1‑150 TCGATGAAGAAGCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGC > 2:721912/1‑150 TCGATGAAGAAGCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGC < 1:834707/150‑1 ATGAAGAAGCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCG > 1:1399000/1‑150 GAAGAAGCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCT > 2:2052365/1‑150 AAGAAGCGGGACAGTCTCATGGGTGTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTC < 1:721912/150‑1 GCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCgaacaag > 1:1212619/1‑143 CCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTC > 2:729035/1‑148 CCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTC < 1:729035/148‑1 GAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTT > 1:176036/1‑150 GTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGG > 1:2359723/1‑87 GTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGG < 2:2359723/87‑1 GTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAG < 1:540935/147‑1 GTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAG > 2:540935/1‑147 CGCGGGCTCGCCCGCTCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGGCCGCGTGCTG < 2:176036/150‑1 CCGCTCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGACCGCGTGCTGCGCATGGCACC > 2:233832/1‑150 GCTCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGCGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGGCCGCGTGCTGCGCATGGCACCCc > 2:1904315/1‑149 TCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATC > 2:1958867/1‑66 TCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATC < 1:1958867/66‑1 CCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGGCCGCGTGCTGCGCATGGCACCCGGCGA > 1:2190478/1‑150 CACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCA > 1:87062/1‑113 CACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCA < 2:87062/113‑1 CAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGGCCGCGTGCTGCGCATGGCACCCGGCGACGC > 1:474792/1‑150 GGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGGCCGCGTGCTGCGCATGGCACCCGGCGACGCCG > 1:801333/1‑150 GGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCC > 1:1802579/1‑47 GGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCC < 2:1802579/47‑1 GGGATCTGCGTCTCTCTATTTACCCAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGGCCGCGTGCCGCGCATGGCACCCGGCGACGCCGT > 2:1621675/1‑150 GTCGATGAAGAAGCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5680023‑5679860 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaggGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGGCCGCGTGCTGCGCATGGCACCCGGCGACGCCGT > NC_002947/5679964‑5680112 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |