New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5679860 =103 (1.100)6 (0.070) 6/218 NT 6.7% intergenic (+27/‑137) bioA/rsmE adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA/16S rRNA (uracil(1498)‑N(3))‑methyltransferase
?NC_002947 5679964 = 78 (0.960)intergenic (+131/‑33) bioA/rsmE adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA/16S rRNA (uracil(1498)‑N(3))‑methyltransferase

GTCGATGAAGAAGCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5680023‑5679860
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaggGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGGCCGCGTGCTGCGCATGGCACCCGGCGACGCCGT  >  NC_002947/5679964‑5680112
                                                                                                                                                                                                                                                                                                                         
GTCGATGAAGGAGCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATGCCCTGTGGGAGCCGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCG                                                                                                                                                                     >  2:889271/1‑150
GTCGATGAAGAAGCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCG                                                                                                                                                                     >  1:429261/1‑150
 TCGATGAAGAAGCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGC                                                                                                                                                                    >  2:721912/1‑150
 TCGATGAAGAAGCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGC                                                                                                                                                                    <  1:834707/150‑1
    ATGAAGAAGCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCG                                                                                                                                                                 >  1:1399000/1‑150
      GAAGAAGCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCT                                                                                                                                                               >  2:2052365/1‑150
       AAGAAGCGGGACAGTCTCATGGGTGTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTC                                                                                                                                                              <  1:721912/150‑1
            GCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCgaacaag                                                                                                                                                         >  1:1212619/1‑143
                                                            CCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTC                                                                                                           >  2:729035/1‑148
                                                            CCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTC                                                                                                           <  1:729035/148‑1
                                                                   GAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTT                                                                                                  >  1:176036/1‑150
                                                                             GTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGG                                                                                                                                                       >  1:2359723/1‑87
                                                                             GTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGG                                                                                                                                                       <  2:2359723/87‑1
                                                                                                                 GTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAG                                                       <  1:540935/147‑1
                                                                                                                 GTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAG                                                       >  2:540935/1‑147
                                                                                                                                            CGCGGGCTCGCCCGCTCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGGCCGCGTGCTG                         <  2:176036/150‑1
                                                                                                                                                       CCGCTCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGACCGCGTGCTGCGCATGGCACC              >  2:233832/1‑150
                                                                                                                                                         GCTCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGCGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGGCCGCGTGCTGCGCATGGCACCCc            >  2:1904315/1‑149
                                                                                                                                                           TCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATC                                                                                              >  2:1958867/1‑66
                                                                                                                                                           TCCCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATC                                                                                              <  1:1958867/66‑1
                                                                                                                                                             CCACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGGCCGCGTGCTGCGCATGGCACCCGGCGA        >  1:2190478/1‑150
                                                                                                                                                              CACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCA                                            >  1:87062/1‑113
                                                                                                                                                              CACAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCA                                            <  2:87062/113‑1
                                                                                                                                                                CAGGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGGCCGCGTGCTGCGCATGGCACCCGGCGACGC     >  1:474792/1‑150
                                                                                                                                                                  GGGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGGCCGCGTGCTGCGCATGGCACCCGGCGACGCCG   >  1:801333/1‑150
                                                                                                                                                                   GGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCC                                                                                                         >  1:1802579/1‑47
                                                                                                                                                                   GGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCC                                                                                                         <  2:1802579/47‑1
                                                                                                                                                                   GGGATCTGCGTCTCTCTATTTACCCAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGGCCGCGTGCCGCGCATGGCACCCGGCGACGCCGT  >  2:1621675/1‑150
                                                                                                                                                                                                                                                                                                                         
GTCGATGAAGAAGCGGGACAGTCTCATGGGTTTGCTCGGTAAATAGAGAGACGCAGATCCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5680023‑5679860
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaggGGATCTGCGTCTCTCTATTTACCGAGCAAACCCATGAGACTGTCCCGCTTCTTCATCGACGCCCCCCTGAGCCTTGGCGAGCACGACCTGCCCGAGGCCCAGGCCCATTACATTGGCCGCGTGCTGCGCATGGCACCCGGCGACGCCGT  >  NC_002947/5679964‑5680112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.