New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5692599 =	121 (1.300)	9 (0.100)	7/242	NT	7.2%	intergenic (+12/‑158)	PP_4994/PP_4995	hypothetical protein/exopolysaccharide biosynthesis protein
	?	NC_002947	5692701 =	115 (1.270)					intergenic (+114/‑56)	PP_4994/PP_4995	hypothetical protein/exopolysaccharide biosynthesis protein

AGTGTGGCGCCAGGTGGCGAGACTGACAAGGTGGGCTTTGTGTCGCTTTTGCCAGCCCCTTCGCGGGCATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5692749‑5692599 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTTCCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTAT  >  NC_002947/5692701‑5692849                                                                                                                                                                                                                                                                                                              AGTGTGGCGCCAGGTGGCGAGACTGACAAGGTGGGCTTTGTGTCGCTTTTGCCAGCCCCTTCGCGGGCATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGC                                                                                                                                                        >  2:1986452/1‑150  GTGTGGCGCCAGGTGGCGAGACTGACAAGGTGGGCTTTGTGTCGCTTTTGCCAGCCCCTTCGCGGGCATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCA                                                                                                                                                       >  1:1497470/1‑150                                                     CAGCCCCTTCGCGGGCATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCG                                                                                                                                                          >  1:150044/1‑96                                                     CAGCCCCTTCGCGGGCATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCG                                                                                                                                                          <  2:150044/96‑1                                                                  GGCATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAAC                                                                                       >  1:583571/1‑150                                                                     ATGNCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCT                                                                                    >  2:1499308/1‑150                                                                     ATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCT                                                                                    >  1:2448433/1‑150                                                                     ATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCT                                                                                    >  2:42399/1‑150                                                                       GCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCG                                                                                  <  2:2448433/150‑1                                                                           GCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACC                                                                              >  1:346013/1‑150                                                                             TCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCA                                                                            <  2:346013/150‑1                                                                                                        GCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTTCCTGATCG                                                 <  1:1499308/150‑1                                                                                                                                     cCCCGCGAGGAGGACGGCAAAAGCGACACAACGCACACTTTGTTAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTTCCTGATCGCCATGCCGCACATGGCCGATCCGAACTTC                    <  2:583571/149‑1                                                                                                                                                   gGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTTCCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCAC      <  2:1564082/149‑1                                                                                                                                                     GCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTTCCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGT    <  2:846182/150‑1                                                                                                                                                       AAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTTCCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTAT  >  1:285575/1‑150                                                                                                                                                                                                                                                                                                              AGTGTGGCGCCAGGTGGCGAGACTGACAAGGTGGGCTTTGTGTCGCTTTTGCCAGCCCCTTCGCGGGCATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5692749‑5692599 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTTCCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTAT  >  NC_002947/5692701‑5692849

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.