New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5712250 | 92 (0.990) | 5 (0.050) | 5/244 | NT | 5.2% | coding (263/624 nt) | PP_5012 | hypothetical protein |
? | NC_002947 | = 5712282 | 93 (1.020) | coding (295/624 nt) | PP_5012 | hypothetical protein |
TCGACTGCCGCCAACCGGCCCTGCAGGTGTTCATCCTGCCCGATGAAGAGGGCCTGATGCTCGCCGCCCATTGGCAGGGCGAGGTCGACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5712100‑5712250 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcCGTGCAGCTCGACCTGCGGGCTGTGCAGCACAGCGGTCTTGTCCTTGACCAAGGCCAGTTGCGCCAGGCTACCGGCGGGGGCGCGCAGGCGGCAGTCGACCTCGCCCTGCCAATGGGCGGCGAGCATCAGGCCCTCTTCATCGGGCA < NC_002947/5712282‑5712136 TCGACTGCCGCCAACCGGCCCTGCAGGTGTTCATCCTGCCCGATGAAGAGGGCCTGATGCTCGACGCCCATTGGCAGGGCGAGGTCGACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCG > 2:1326370/1‑150 CTGCCCGATGAAGAGGGCCTGATGCTCGCCGCCCATTGGCAGGGCGAGGTCGACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGCCGTGCAGCTCGACCTGCGGGCTGTGCAGCACAGC < 2:1814625/150‑1 TGCTCGCCGCCCATTGGCAGGGCGAGGTCGACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGC > 1:1610648/1‑94 TGCTCGCCGCCCATTGGCAGGGCGAGGTCGACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGC < 2:1610648/94‑1 TCGCCGCCCATTGGCAGGGCGAGGTCGACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGCCGTGCAGCTCGACCTGCGGGCTGTGCAGCACAGCGGT > 1:920686/1‑128 TCGCCGCCCATTGGCAGGGCGAGGTCGACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGCCGTGCAGCTCGACCTGCGGGCTGTGCAGCACAGCGGT < 2:920686/128‑1 ACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGCCGTGCAGCTCGACCTGCGGGCTGTGCAGCACAGCGGTCTTGTCCTTGACCAAGGCCA < 1:1699235/121‑1 ACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGCCGTGCAGCTCGACCTGCGGGCTGTGCAGCACAGCGGTCTTGTCCTTGACCAAGGCCA > 2:1699235/1‑121 CCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACC > 1:1852062/1‑58 CCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACC < 2:1852062/58‑1 CGCCGTGCAGCTCGACCTGCGGGCTGTGCAGCACAGCGGTCTTGTCCTTGACCAAGGCCAGTTGCGCCAGGCTACCGGCGGGGGCGCGCAGGCGGCAGTCGACCTCGCCCTGCCAATGGGCGGCGAGCATCAGGCCCTCTTCATCGGGCA < 2:210297/150‑1 TCGACTGCCGCCAACCGGCCCTGCAGGTGTTCATCCTGCCCGATGAAGAGGGCCTGATGCTCGCCGCCCATTGGCAGGGCGAGGTCGACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5712100‑5712250 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcCGTGCAGCTCGACCTGCGGGCTGTGCAGCACAGCGGTCTTGTCCTTGACCAAGGCCAGTTGCGCCAGGCTACCGGCGGGGGCGCGCAGGCGGCAGTCGACCTCGCCCTGCCAATGGGCGGCGAGCATCAGGCCCTCTTCATCGGGCA < NC_002947/5712282‑5712136 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |