| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5733769 = | 95 (1.020) | 8 (0.090) | 8/240 | NT | 7.9% | coding (262/1404 nt) | proY | proline (histidine) APC transporter |
| ? | NC_002947 | 5733783 = | 95 (1.060) | coding (248/1404 nt) | proY | proline (histidine) APC transporter | |||||
ATCCAGATGGCAGGCCCGGCCGTTCTGCTGGCCTACCTGATCGGCGGCGCTGCAGTGTTCATGGTCATGCGCGCCCTTGGCGAAATGGCCGTGCACAACCCGGTGGCCGGCTCCTTCGGCCACTACGCCACCACCTACCTCGGCCCAAT‑GGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5733922‑5733769‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgAGGTAGGTGGTGGCGTAGTGGCCGAAGGAGCCGGCCACCGGGTTGTGCACGGCCATTTCGCCAAGGGCGCGCATGACCATGAACACTGCAGCGCCGCCGATCAGGTAGGCCAGCAGAACGGCCGGGCCTGCCATCTGGATGGCCGAGG > NC_002947/5733783‑5733930 ATCCAGATGGCAGGCCCGGCCGTTCTACTCCCTTACCTGATCGGCGGCGCTGCAGTGTTCATGGTCATGCGCGCCCTTGGCGAAATGGCCGTGCACAACCCGGTGGCCGGCTCCTTCGGCCACTACGCCACCACCTACCTCGGCCCAAT‑G > 1:1880673/1‑150 TCCAGATGGCAGGCCCGGCCGTTCTGCTGGCCTACCTGATCGGCGGCGCTGCAGTGTTCATGGTCATGCGCGCCCTTGGCGAAATGGCCGTGCACAACCCGGTGGCCGGCTCCTTCGGCCACTACGCCACCACCTACCTCGGCCCAAT‑GG < 2:657284/150‑1 CCAGATGGCAGGCCCGGCCGTTCTGCTGGCCTACCTGATCGGCGGCGCTGCAGTGTTCATGGTCATGCGCGCCCTTGGCGAAATGGCCGTGCACAACCCGGTGGCCGGCTCCTTCGGCCACTACGCCACCACCTACCTCGGCCCAAT‑GGC > 2:1612444/1‑150 CAGATGGCAGGCCCGGCCGTTCTGCTGGCCTACCTGATCGGCGGCGCTGCAGTGTTCATGGTCATGCGCGCCCTTGGCGAAATGGCCGTGCACAACCCGGTGGCCGGCTCCTTCGGCCACTACGCCACCACCTACCTCGGCCCAAT‑GGCC < 2:382489/150‑1 AGATGGCAGGCCCGGCCGTTCTGCTGGCCTACCTGATCGGCGGCGCTGCAGTGTTCATGGTCATGCGCGCCCTTGGCGAAATGGCCGTGCACAACCCGGTGGCCGGCTCCTTCGGCCACTACGCCACCACCTACCTCGGCCCAAT‑GGCCG > 1:1833768/1‑150 CCGTGCACAACCCGGTGGCCGGCTCCTTCGGCCACTACGCCACCACCTACCTCGG‑CCATTGGGCCGAGGTAG > 1:1853430/1‑72 CCGTGCACAACCCGGTGGCCGGCTCCTTCGGCCACTACGCCACCACCTACCTCGG‑CCATTGGGCCGAGGTAG < 2:1853430/72‑1 CTTCGGCCACTACGCCACCACCTACCTCGG‑CCATTGGGCCGAGGTAGGTGG > 2:551871/1‑51 CTTCGGCCACTACGCCACCACCTACCTCGG‑CCATTGGGCCGAGGTAGGTGG < 1:551871/51‑1 TACCTCGGCCCAAT‑GGCCGAGGTAGGTGGTGGCGTAGTGGCCGAAGGAGCCGGCCACCGGGTTGTGCACGGCCATTTCGCCAAGGGCGCGCATGACCATGAACACTGCAGCGCCGCCGATCAGGTAGGCCAGCAGAACGGCCGGGCCTGC > 1:99007/1‑150 CCTCGGCCCAAT‑GGCCGAGGTAGGTGGTGGCGTAGTGGCCGAAGGAGCCGGCCACCGGGTTGTGCACGGCCATTTCGCCAAGGGCGCGCATGACCATGAACACTGCAGCGCCGCCGATCAGGTAGGCCAGCAGAACGGCCGGGCCTGCCA > 2:1574454/1‑150 TCGGCCCAAT‑GGCCGAGGTAGGTGGTGGCGTAGTGGCCGAAGGAGCCGGCCACCGGGTTGTGCACGGCCATTTCGCCAAGGGCGCGCATGACCATGAACACTGCAGCGCCGCCGATCAGGTAGGCCAGCAGAACGGCCGGGCCTGCCATC > 2:185563/1‑150 GGCCCAAT‑GGCCGAGGTAGGTGGTGGCGTAGTGGCCGAAGGAGCCGGCCACCGGGTTGTGCACGGCCATTTCGCCAAGGGCGCGCATGACCATGAACACTGCAGCGCCGCCGATCAGGTAGGCCAGCAGAACGGCCGGGCCTGCCATCTG < 1:1574454/150‑1 GCCGAGGTAGGTGGTGGCGTAGTGGCCGAAGGAGCCGGCCACCGGGTTGTGCACGGCCATTTCGCCAAGGGCGCGCATGACCATGAACACTGCAGCGCCGCCGATCAGGTAGGCCAGCAGAACGGCCGGGCCTGCCATCTGGATGGCCGA > 1:900809/1‑150 GCCGAGGTAGGTGGTGGCGTAGTGGCCGAAGGAGCCGGCCACCGGGTTGTGCACGGCCATTTCGCCAAGGGCGCGCATGACCATGAACACTGCAGCGCCGCCGATCAGGTAGGCCAGCAGAACGGCCGGGCCTGCCATCTGGATGGCCGA < 1:1931999/150‑1 GCCGAGGTAGGTGGTGGCGTAGTGGCCGAAGGAGCCGGCCACCGGGTTGTGCACGGCCATTTCGCCAAGGGCGCGCATGACCATGAACACTGCAGCGCCGCCGATCAGGTAGGCCAGCAGAACGGCCGGGCCTGCCATCTGGATGGCCGA > 1:1898121/1‑150 GCCGAGGTAGGTGGTGGCGTAGTGGCCGAAGGAGCCGGCCACCGGGTTGTGCACGGCCATTTCGCCAAGGGCGCGCATGACCATGAACACTGCAGCGCCGCCGATCAGGTAGGCCAGCAGAACGGCCGGGCCTGCCATCTGGATGGCCGA < 1:1292813/150‑1 cgGAGGTAGGTGGTGGCGTAGAGGCCGAAGGAGCCGGCCACCGGGTTGTGCACGGCCATTTCGCCAAGGGCGCGCATGACCATGAACACTGCAGCGCCGCCGATCAGGTAGGCCAGCAGAACGGCCGGGCCTGCCATCTGGATGGCCGAG > 1:1047499/3‑150 CCGAGGTAGGTGGTGGCGTAGTGGCCGAAGGAGCCGGCCACCGGGTTGTGCACGGCCATTTCGCCAAGGGCGCGCATGACCATGAACACTGCAGCGCCGCCGATCAGGTAGGCCAGCAGAACGGCCGGGCCTGCCATCTGGATGGCCGAG > 1:1201677/1‑150 CGAGGTAGGTGGTGGCGTAGTGGCCGAAGGAGCCGGCCACCGGGTTGTGCACGGCCATTTCGCCAAGGGCGCGCATGACCATGAACACTGCAGCGCCGCCGATCAGGTAGGCCAGCAGAACGGCCGGGCCTGCCATCTGGATGGCCGAGG > 2:373347/1‑150 ATCCAGATGGCAGGCCCGGCCGTTCTGCTGGCCTACCTGATCGGCGGCGCTGCAGTGTTCATGGTCATGCGCGCCCTTGGCGAAATGGCCGTGCACAACCCGGTGGCCGGCTCCTTCGGCCACTACGCCACCACCTACCTCGGCCCAAT‑GGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5733922‑5733769‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgAGGTAGGTGGTGGCGTAGTGGCCGAAGGAGCCGGCCACCGGGTTGTGCACGGCCATTTCGCCAAGGGCGCGCATGACCATGAACACTGCAGCGCCGCCGATCAGGTAGGCCAGCAGAACGGCCGGGCCTGCCATCTGGATGGCCGAGG > NC_002947/5733783‑5733930 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |