New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5751735 = | 83 (0.890) | 8 (0.090) | 6/238 | NT | 9.9% | intergenic (‑117/‑354) | thiI/glnA | tRNA sulfurtransferase/glutamine synthetase |
? | NC_002947 | 5751793 = | 66 (0.740) | intergenic (‑175/‑296) | thiI/glnA | tRNA sulfurtransferase/glutamine synthetase |
CTACGGGCTTTGCACCGCCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCGGAACAGGCGCTGCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5751800‑5751735 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaaaGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACGCAAACGCC > NC_002947/5751793‑5751940 CTACGGGCTTTGCACCGCCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCGGAACAGGCGCTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGAT > 1:617644/1‑150 GCTTTGCACCGCCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCGGAACAGGCGCTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGT > 1:1654656/1‑134 GCTTTGCACCGCCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCGGAACAGGCGCTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGT > 1:452478/1‑134 GCTTTGCACCGCCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCGGAACAGGCGCTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGT < 2:1654656/134‑1 GCTTTGCACCGCCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCGGAACAGGCGCTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGT < 2:452478/134‑1 GCACCGCCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCGGAACAGGCGGTGCAAAGCCAGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTG < 1:1099149/98‑1 GCACCGCCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCGGAACAGGCGGTGCAAAGCCAGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTG > 2:1099149/1‑98 CACCGCCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCGGAACAGGCGCTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCAT < 2:617644/150‑1 AAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACGCAAACGC > 2:1640399/1‑150 AAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACGCAAACGCC > 2:1614830/1‑150 CTACGGGCTTTGCACCGCCTGTAGGCGCGGGTTTACCCGCGAAAGGGCCGGAACAGGCGCTGCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5751800‑5751735 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaaaGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACGCAAACGCC > NC_002947/5751793‑5751940 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |