New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 5796767100 (1.070)7 (0.080) 7/238 NT 6.8% coding (1189/4446 nt) gltB L‑glutamate synthase subunit alpha
?NC_002947 = 5796785 96 (1.080)coding (1171/4446 nt) gltB L‑glutamate synthase subunit alpha

TGGCCACACCCTGGTCGTCGGTCAGCGTCGCCTGGATGCGGGTGGCGTGCTGACGCAGCCAGCGCTTGTACGGGTGGCGCGACTTCAGGCGGTTGTCGATGGCGTCGGTGTCGAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGATCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5796614‑5796767
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccAAGGGCCGTGTCGGCCCGGGCCAGATCCTTGCCGTGGACACCGAAACCGGCCAGATCCTCGACACCGACGCCATCGACAACCGCCTGAAGTCGCGCCACCCGTACAAGCGCTGGCTGCGTCAGCACGCCACCCGCATCCAGGCGACGCT  <  NC_002947/5796785‑5796637
                                                                                                                                                                                                                                                                                                               
TGGCCACACCCTGGTCGTCGGTCAGCGTCGCCTGGATGCGGGTGGCGTGCTGACGCAGCCAGCGCTTGTACGGGTGGCGCGACTTCAGGCGGTTGTCGATGGCGTCGGTGTCGAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGATCT                                                                                                                                                           <  2:57602/150‑1
TGGCCACACCCTGGTCGTCGGTCAGCGTCGCCTGGATGCGGGTGGCGTGCTGACGCAGCCAGCGCTTGTACGGGTGGCGCGACTTCAGGCGGTTGTCGATGGCGTCGGTGTCGAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGAACT                                                                                                                                                           >  2:423379/1‑150
 GGCCACACCCTGGTCGTGGGTCAGCGTCGCCTGGATGCGGGTGGCGTGCTGACGCAGCCAGCGCTTGTACGGGTGGCGCGACTTCAGGCGGTTGTCGATGGCGTCGGTGTCGAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGATCTG                                                                                                                                                          <  2:861590/150‑1
 GGCCACACCCTGGTCGTCGGTCAGCGTCGCCTGGATGCGGGTGGCGTGCTGACGCAGCCAGCGCTTGTACGGGTGGCGCGACTTCAGGCGGTTGTCGATGGCGTCGGTGTCGAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGATCTG                                                                                                                                                          <  1:1665971/150‑1
 GGCCACACCCTGGTCGTCGGTCAGCGTCGCCTGGATGCGGGTGGCGTGCTGACGCAGCCAGCGCTTGTACGGGTGGCGCGACTTCAGGCGGTTGTCGATGGCGTCGGTGTCGAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGATCTG                                                                                                                                                          >  2:411635/1‑150
 GGCCACACCCTGGTCGTCGGTCAGCGTCGCCTGGATGCGCCTGGCGTGCTGACGCAGCCAGCGCTTGTACGGGTGGCGCGACTTCAGGCGGTTGTCGATGGCGTCGGTGTCGAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGATCTG                                                                                                                                                          <  1:981939/150‑1
  GCCACACCCTGGTCGTCGGTCAGCGTCGCCTGGATGCGGGTGGCGTGCTGACGCAGCCAGCGCTTGTACGGGTGGCGCGACTTCAGGCGGTTGTCGATGGCGTCGGTGTCGAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGATCTGG                                                                                                                                                         >  2:256170/1‑150
        CCCTGGTCGTCGGTCAGCGTCGCCTGGATGCGGGTGGCGTGCTGACGCAGCCAGCGCTTGTACGGGTGGCGCGACTTCAGGCGGTTGTCGATGGCGTCGGTGTCGAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGATCT                                                                                                                                                           <  1:477800/142‑1
        CCCTGGTCGTCGGTCAGCGTCGCCTGGATGCGGGTGGCGTGCTGACGCAGCCAGCGCTTGTACGGGTGGCGCGACTTCAGGCGGTTGTCGATGGCGTCGGTGTCGAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGATCT                                                                                                                                                           >  2:477800/1‑142
                                  GATGCGGGTGGCGTGCTGACGCAGCCAGCGCTTGTACGGGTGGCGCGACTTCAGGCGGTTGTCGATGGCGTCGGTGTCGAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGAGCTGGCCAAGGGCCGTGTCGGCCCGGGCCAGATCCTT                                                                                                                         <  1:2416760/150‑1
                                             CGTGCTGACGCAGCCAGCGCTTGTACGGGTAGCGCGACTTCAGGCGGTTGTCGATGGCGTCGGTGTCGAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGATCTGGCCAAGGGCCGTGTCGGCCCGGGCCAGA                                                                                                                              >  2:1659781/1‑134
                                             CGTGCTGACGCAGCCAGCGCTTGTACGGGTAGCGCGACTTCAGGCGGTTGTCGATGGCGTCGGTGTCGAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGATCTGGCCAAGGGCCGTGTCGGCCCGGGCCAGA                                                                                                                              <  1:1659781/134‑1
                                                                       GGGTGGCGCGACTTCAGGCGGTTGTCGATGGCGTCGGTGTCGAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGATCTGGCCAAGGGCCGTGTCGGCCCGGGCCAGAT                                                                                                                             <  1:356674/109‑1
                                                                       GGGTGGCGCGACTTCAGGCGGTTGTCGATGGCGTCGGTGTCGAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGATCTGGCCAAGGGCCGTGTCGGCCCGGGCCAGAT                                                                                                                             >  2:356674/1‑109
                                                                                                                GAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGATCTGGCCAAGGGCCGTGTCGGCCCGGGCCAGATCCTTG                                                                                                                        <  2:253714/73‑1
                                                                                                                GAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGATCTGGCCAAGGGCCGTGTCGGCCCGGGCCAGATCCTTG                                                                                                                        >  1:253714/1‑73
                                                                                                                                                   TCTGGCCAAGGGCCGTGTCGGCCCGGGCCAGATCCTTGCCGTGGACACCGAAACCGGCCAGATCCTCGACACCGACGCCATCGACAACCGCCTGAAGTCGCGCCACCCGTACAAGCGCTGGCTGCGTCAGCA                          <  2:1872776/132‑1
                                                                                                                                                   TCTGGCCAAGGGCCGTGTCGGCCCGGGCCAGATCCTTGCCGTGGACACCGAAACCGGCCAGATCCTCGACACCGACGCCATCGACAACCGCCTGAAGTCGCGCCACCCGTACAAGCGCTGGCTGCGTCAGCA                          >  1:1872776/1‑132
                                                                                                                                                        CCAAGGGCCGTGTCGGCCCGGGCCAGATCCTTGCCGTGGACACCGAAACCGGCCAGATCCTCGACACCGACGCCATCGACAACCGCCTGAAGTCGCGCCACCCGTACAAGCGCTGGCTGCGTCAGCACGCCACCCGCATCCAGGCGACGC   >  2:2267349/1‑150
                                                                                                                                                         CAAGGGCCGTGTCGGCCCGGGCCAGATCCTTGCCGTGGACACCGAAACCGGCCAGATCCTCGACACCGACGCCATCGACAACCGCCTGAAGTCGCGCCACCCGTACAAGCGCTGGCTGCGTCAGCACGCCACCCGCATCCAGGCGACGCT  >  1:411635/1‑150
                                                                                                                                                                                                                                                                                                               
TGGCCACACCCTGGTCGTCGGTCAGCGTCGCCTGGATGCGGGTGGCGTGCTGACGCAGCCAGCGCTTGTACGGGTGGCGCGACTTCAGGCGGTTGTCGATGGCGTCGGTGTCGAGGATCTGGCCGGTTTCGGTGTCCACGGCAAGGATCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5796614‑5796767
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccAAGGGCCGTGTCGGCCCGGGCCAGATCCTTGCCGTGGACACCGAAACCGGCCAGATCCTCGACACCGACGCCATCGACAACCGCCTGAAGTCGCGCCACCCGTACAAGCGCTGGCTGCGTCAGCACGCCACCCGCATCCAGGCGACGCT  <  NC_002947/5796785‑5796637

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.