New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5817927 = | 105 (1.130) | 5 (0.060) | 5/236 | NT | 5.1% | coding (83/1011 nt) | pilT | twitching motility protein |
? | NC_002947 | 5817979 = | 88 (1.000) | coding (31/1011 nt) | pilT | twitching motility protein |
TTGTCTGCTAGGGTGGACATGGATCGATGCCGGCAGCTGTGGGGTCTGCGGCATTCTACCTGCTTGAAGGCCTTTGGGGAGTCTTATGGATGTGACCGACCTGTTGGCCCGAGCTGTGGATGCGGGGGCTTCAGACCTGCACCTGGCGACGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5818082‑5817927 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggccaACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCGTATCGCCAGTGCTGCCCAGGCAGT > NC_002947/5817979‑5818127 TTGTCTGCTAGGGTGGACATGGATCGATGCCGGCAGCTGTGGGGTCTGCGGCATTCTACCTGCTTGAAGGCCTTTGGGGAGTCTTATGGATGTGACCGACCTGTTGGCCCGAGCTGTGGATGCGGGGGCTTCAGACCTGCACCTGGCGAC > 1:1213930/1‑150 TCTGCTAGGGTGGACATGGATCGATGCCGGCAGCTTTGGGGTCTGCGGCATTCTACCTGCTTGAAGGCCTTTGGGGAGTCTTATGGATGTGACCGACCTGTTGGCCCGAGCTGTGGATGCGGGGGCTTCAGACCTGCACCTGGCGACGGG < 1:1830544/150‑1 TCTGCTAGGGTGGACATGGATCGATGCCGGCAGCTGTGGGGTCTGCGGCATTCTACCTGCTTGAAGGCCTTTGGGGAGTCTTATGGATGTGACCGACCTGTTGGCCCGAGCTGTGGATGCGGGGGCTTCAGACCTGCACCTGGCGACGGG > 1:1387309/1‑150 CTGCTAGGGTGGACATGGATCGATGCCGGCAGCTGTGGGGTCTGCGGCATTCTACCTGCTTGAAGGCCTTTGGGGAGTATTATGGATGTGACCGACCTGTTGNCCCGAGCTGTGGATGCGGGGGCTTCAGACCTGCACCTGGCGACGGGC < 1:318761/150‑1 CTGCTAGGGTGGACACGGATCGATGCCGGCAGCTGTGGGGTCTGCGGCATTCTACCTGCTTGAAGGCCTTTGGGGAGTCTTATGGATGTGACCGACCTGTTGGCCCGAGCTGTGGATGCGGGGGCTTCAGACCTGCACCTGGCGACGGGC < 2:2005632/150‑1 TGGGGTCTGCGGCATTCTACCTGCTTGAAGGCCTTTGGGGAGTCTTATAGATGTGACCGACCTGTTGGCCCGAGCTGTGGATGCGGGGGCTTCAGACCTGCACCTGGCGACGG < 1:558405/113‑1 TGGGGTCTGCGGCATTCTACCTGCTTGAAGGCCTTTGGGGAGTCTTATAGATGTGACCGACCTGTTGGCCCGAGCTGTGGATGCGGGGGCTTCAGACCTGCACCTGGCGACGG > 2:558405/1‑113 ACCTGTTGGCCCGAGCTGTGGATGCGGGGGCTTCAGACCTGCACCTGGCGACGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCAC > 2:1272338/1‑150 GCCCGAGCTGTGGATGCGGGGGCTTCAGACCTGCACCTGGCGACGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAG > 1:2284279/1‑150 CCGAGCTGTGGATGCGGGGGCTTCAGACCTGCACCTGGCGACGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCAC > 1:175114/1‑140 CCGAGCTGTGGATGCGGGGGCTTCAGACCTGCACCTGGCGACGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCAC < 2:175114/140‑1 CTTCAGACCTGCACCTGGCGACGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGC < 2:2284279/150‑1 GCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCGTATCGCCAGTGCTGCCCAGGC < 2:1414788/150‑1 AACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCGTATCGCCAGTGCTGCCCAGGCAGT > 1:391650/1‑150 TTGTCTGCTAGGGTGGACATGGATCGATGCCGGCAGCTGTGGGGTCTGCGGCATTCTACCTGCTTGAAGGCCTTTGGGGAGTCTTATGGATGTGACCGACCTGTTGGCCCGAGCTGTGGATGCGGGGGCTTCAGACCTGCACCTGGCGACGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5818082‑5817927 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggccaACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCGTATCGCCAGTGCTGCCCAGGCAGT > NC_002947/5817979‑5818127 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |