New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5827662 = | 80 (0.860) | 8 (0.090) | 8/240 | NT | 9.5% | coding (519/711 nt) | mtgA | monofunctional biosynthetic peptidoglycan transglycosylase |
? | NC_002947 | 5827692 = | 75 (0.840) | coding (549/711 nt) | mtgA | monofunctional biosynthetic peptidoglycan transglycosylase |
GGGCCCGCCCAGCTGGCTCATCTGCCGGCGAATCCAGCCGGCCCGGCTGGCCACGTAGGCACTCGGTCGGCTGGCACTCCACTTGATTGGGCTTGGCAGCACCGCTGCCAGCTGCGCTGCCTGCTGGCGGCTGAGCCGGCTGGCGTCGACGCC‑‑A‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5827815‑5827662 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcc‑‑aGCAGG‑‑CA‑GCGCAGCTGGCAGCGGTGCTGCCAAGCCCAATCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACT > NC_002947/5827692‑5827837 GGGCCCGCCCAGCTGGCTCATCTGCCGGCGAATCCAGCCGGCCCGGCTGGCCACGTAGGCACTCGGTCGGCTGGCACTCCACTTGATTGGGCTTGGCAGCACCGCTGCCAGCTGCGCTGCCTGCTGGCGGCTGAGCCGGCTGGCGTCGAC < 1:2129361/150‑1 CCCGCCCAGCTGGCTCATCTGCCGGCGAATCCAGCCGGCCCGGCTGGCCACGTAGGCACTCGGTCGGCTGGCACTCCACTTGATTGGGCTTGGCAGCACCGCTGCCAGCTGCGCTGCCTGCTGGCGGCTGAGCCGGCTGGCGTCGACGCC > 1:2406411/1‑150 TGCGCTGCCTGCTGGCGGTTGAGCCGGCTGGCGTCGACGCCAAAGTGAT‑‑AACGCGCCGCTGGCAGCGGTGCTGCCAAGCCCAATCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGC < 2:704804/146‑1 TGCGCTGCCTGCTGGCGGTTGAGCCGGCTGGCGTCGACGCC‑‑AAAGTGATAACGCGCCGCTGGCAGCGGTGCTGCCAAGCCCAATCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGC > 1:704804/1‑146 GCCTGCTGGCGGCTGAGCCGGCTGGCGTCGACGCC‑‑AGCAGG‑‑CA‑GCGCAGCTGGCAGCGGTGCTGCCAAGCCCAATCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCT > 1:2256459/1‑150 TGCTGGCTGCTGAGCCGGCTGGCGTCGACGCC‑‑AGCAGG‑‑CA‑GCGCAGCTGGCAGCGGTGCTGCCAAGCCCAATCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGG > 2:1214934/1‑150 GCTGGCGGCTGAGCCGGCTGGCGTCGACGCC‑‑AGCAGG‑‑CA‑GCGCAGCTGGCAGCGGTGCTGCCAAGCCCAATCAAGTGGAGTGCCAGCCGACCGAGTGCC < 1:252742/99‑1 GCTGGCGGCTGAGCCGGCTGGCGTCGACGCC‑‑AGCAGG‑‑CA‑GCGCAGCTGGCAGCGGTGCTGCCAAGCCCAATCAAGTGGAGTGCCAGCCGACCGAGTGCC > 2:252742/1‑99 CTGGCGGCTGAGCCGGCTGGCGTCGACGCC‑‑AGCAGG‑‑CA‑GCGCAGCTGGCAGCGGTGCTGCCAAGCCCAATCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCG > 1:2257281/1‑150 TGGCGGCTGAGCCGGCTGGCGTCGACGCC‑‑AGCAGG‑‑CA‑GCGCAGCTGGCAGCGGTGCTGCCAAGCCCAATCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGG < 1:1214934/150‑1 CGCC‑‑AGCAGG‑‑CA‑GCGCAGCTGGCAGCGGTGCTGCCAAGCCCAATCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGAC > 1:868989/1‑150 GCC‑‑AGCAGG‑‑CA‑GCGCAGCTGGCAGCGGTGCTGCCAAGCCCAATCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACT > 2:2098691/1‑150 GGGCCCGCCCAGCTGGCTCATCTGCCGGCGAATCCAGCCGGCCCGGCTGGCCACGTAGGCACTCGGTCGGCTGGCACTCCACTTGATTGGGCTTGGCAGCACCGCTGCCAGCTGCGCTGCCTGCTGGCGGCTGAGCCGGCTGGCGTCGACGCC‑‑A‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5827815‑5827662 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcc‑‑aGCAGG‑‑CA‑GCGCAGCTGGCAGCGGTGCTGCCAAGCCCAATCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACT > NC_002947/5827692‑5827837 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |