New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 585412191 (0.980)9 (0.100) 9/246 NT 8.9% coding (85/1392 nt) tcyP sodium/cystine symporter
?NC_002947 = 5854146 95 (1.030)coding (110/1392 nt) tcyP sodium/cystine symporter

AGGCGATGCCACTTCTGCTTTTTTCTGCTGGAGCTTCAATGAACCTGCCGCTGTCACTCAACCTGCTGGCGTTCCTGGCCCTGTTGCTGGGTCTGGCACAAACCCGCCGCACCGACTGGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5853999‑5854121
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccAGGCCAAGCAGTACCTTCTTGGCCAGGCTCCAGTCGGTGCGGCGGGTTTGTGCCAGACCCAGCAACAGGGCCAGGAACGCCAGCAGGTTGAGTGACAGCGGCAGGTTCATTGAAGCTCCAGCAGAAAAAAGCAGAAGTGGCATCGCCT  <  NC_002947/5854146‑5853999
                                                                                                                                                                                                                                                                                
AGGCGATGCCACTTCTGCTTTTTTCTGCTGGAGCTTCAATGAACCTGCCGCTGTCACTCAACCTGCTGGCGTTCCTGGCCCTGTTGCTGGGTCTGGCGCAAACCCGCCGCACCGACTGGAGCCTGGCCAAGCAGTACCTTCTTGGCCAGG                                                                                                                           <  2:1448901/150‑1
                  TTTTTTCTGCTGGAGCTTCAATGAACCTGCCGCTGTCACTCAACCTGCTGGCGTTCCTGGCCCTGTTGCTGGGTCTGGCACAAACCCGCCGCACCGACTGGAGCCTGGCCAAGCAGTACCTTCTTGGCCAG                                                                                                                            >  1:1986909/1‑131
                  TTTTTTCTGCTGGAGCTTCAATGAACCTGCCGCTGTCACTCAACCTGCTGGCGTTCCTGGCCCTGTTGCTGGGTCTGGCACAAACCCGCCGCACCGACTGGAGCCTGGCCAAGCAGTACCTTCTTGGCCAG                                                                                                                            <  2:1986909/131‑1
                                         AACCTGCCGCTGTCATTCAACCTGCTGGCGTTCCTGGCCCTGTGGCTGGGTCTGGCACTAACCCGCCGCACCGACTGGAGCCAGGCCAAGCAGTACCTTCTTGGCCAGGCTCCAG                                                                                                                     <  2:1262205/115‑1
                                                                             GCCCTGTTGCTGGGTCTGGCACAAACCCGCCGCACCGACTGGAGCCAGGCCAAGCAGTACCTTCTTGGCCA                                                                                                                             >  1:839758/1‑71
                                                                             GCCCTGTTGCTGGGTCTGGCACAAACCCGCCGCACCGACTGGAGCCAGGCCAAGCAGTACCTTCTTGGCCA                                                                                                                             <  2:839758/71‑1
                                                                                                               CCGACTGGAGCCTGGCCAAGAAGGTACTGCTTGGCCTGGCTCCAGTCGGTGCGGCGGGTTTGTGCCAGACCCAGCAACAGGGCCAGGAACGCCAGCAGGTTGAGTGACAGCGGCAGGTTCATT                                       <  1:1689519/123‑1
                                                                                                               CCGACTGGAGCCTGGCCAAGAAGGTACTGCTTGGCCTGGCTCCAGTCGGTGCGGCGGGTTTGTGCCAGACCCAGCAACAGGGCCAGGAACGCCAGCAGGTTGAGTGACAGCGGCAGGTTCATT                                       >  2:1689519/1‑123
                                                                                                                   CTGGAGCCTGGCCAAGAAGGTACTGCTTGGCCTGGCTCCAGTCGGTGCGGCGGGTTTGTGCCAGACCCAGCAACAGGGCCAGGAACGCCAGCAGGTTGAGTGACAGCGGCAGGTT                                           <  1:1262205/115‑1
                                                                                                                         CCAGGCCAAGCAGTACCTTCTTGGCCAGGCTCCAGTCGGTGCGGCGGGTTTGTGCCAGACCCAGCAACAGGGCCAGGAACGCCAGCAGGTTGAGTGACAGCGGCAGGTTCATTGAAGCTCCAGCAGAAAAAAGCAGAAGTGGCATCGCCT  >  2:796399/1‑150
                                                                                                                          CAGGCCAAGCAGTACCTTCTTGGCCAGGCTCCAGTCGGTGCGGCGGGTTTGTGCCAGACCCAGCAACAGGGCCAGGAACGCCAGCAGGTTGAGTGACAGCGGCAGGTTCATTGAAGCTCCAGCAGAAAAAAGCAGAAGTGGCATCGCCT  >  1:485980/1‑149
                                                                                                                          CAGGCCAAGCAGTACCTTCTTGGCCAGGCTCCAGTCGGTGCGGCGGGTTTGTGCCAGACCCAGCAACAGGGCCAGGAACGCCAGCAGGTTGAGTGACAGCGGCAGGTTCATTGAAGCTCCAGCAGAAAAAAGCAGAAGTGGCATCGCCT  <  2:485980/149‑1
                                                                                                                          CAGGCCAAGCAGTACCTTCTTGGCCAGGCTCCAGTCGGTGCGGCGGGTTTGTGCCAGACCCAGCAACAGGGCCAGGAACGCCAGCAGGTTGAGTGACAGCGGC                                                <  1:491628/103‑1
                                                                                                                          CAGGCCAAGCAGTACCTTCTTGGCCAGGCTCCAGTCGGTGCGGCGGGTTTGTGCCAGACCCAGCAACAGGGCCAGGAACGCCAGCAGGTTGAGTGACAGCGGC                                                >  2:491628/1‑103
                                                                                                                                                                                                                                                                                
AGGCGATGCCACTTCTGCTTTTTTCTGCTGGAGCTTCAATGAACCTGCCGCTGTCACTCAACCTGCTGGCGTTCCTGGCCCTGTTGCTGGGTCTGGCACAAACCCGCCGCACCGACTGGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5853999‑5854121
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccAGGCCAAGCAGTACCTTCTTGGCCAGGCTCCAGTCGGTGCGGCGGGTTTGTGCCAGACCCAGCAACAGGGCCAGGAACGCCAGCAGGTTGAGTGACAGCGGCAGGTTCATTGAAGCTCCAGCAGAAAAAAGCAGAAGTGGCATCGCCT  <  NC_002947/5854146‑5853999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.