| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5958636 = | 93 (1.000) | 6 (0.070) | 5/240 | NT | 6.3% | coding (1984/2856 nt) | cyaA | adenylate cyclase |
| ? | NC_002947 | 5958661 = | 90 (1.000) | coding (2009/2856 nt) | cyaA | adenylate cyclase | |||||
CAGGGTCGTCAGGCTGACATGCTCGGGCAAAAGCTCCAGCACATGGGTGTGTTGGGCCACTTGTAGCAGGTAGCGGTGGTGGAGCCCTTGGTCCCGCAGCAGCTGCACAGTGTCGAAAATTTCCTCTACGCGCTGGCCGATAGGCTGGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5958788‑5958636‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgTAGAGGAAATTTTCGACACTGTGCAGCTGCTGCGGGACCAAGGGCTCCACCACCGCTACCTGCTACAAGTGGCCCAACACACCCATGTGCTGGAGCTTTTGCCCGAGCATGTCAGCCTGACGACCCTGGCCGAGCATGAGGCGCTGCTG > NC_002947/5958661‑5958809 CAGGGTCGTCAGGCTGACATGCTCGGGCAAAAGCTCCAGCACATGGGTGTGTTGGGCCACTTGTAGCAGGTAGCGGTGGTGGAGCCCTTGGTCCCGCAGCAGCTGCACAGTGTCGAAAATTTCCTCTACGCGCTGGCCGATAGGCTGGGC > 2:1132051/1‑150CAGGGTCGCCAGGCTGACAAGCTCGGGCAAAAGCTCCAGCACAGGGGCGGGGTGGGCCACTTGTAGCAGGTAGCGGTGGTGGAGCCCTTGGTCCCGCAGCAGCTGCACAGTGTCGAAAATTTCCTCTACGCGCTGGCCGATAGGCTGGGC > 2:337051/1‑150 GAAAATTTCCTCTACGCGCTGGCCGATAGGCTGGGCGCGTAGAGGAAATTTTCGACACTGTGCAGCTGCTGCGGGACCAAGGGCTCCACCACCGCTACCTGCTACAAGT > 1:464729/1‑109 GAAAATTTCCTCTACGCGCTGGCCGATAGGCTGGGCGCGTAGAGGAAATTTTCGACACTGTGCAGCTGCTGCGGGACCAAGGGCTCCACCACCGCTACCTGCTACAAGT < 2:464729/109‑1 TCTACGCGCTGGCCGATAGGCTGGGCGCGTAGAGGAAATTTTCGACACTGTGCAGCTGCTGCGGGACCAAGGGCTCCACCACCGCTACCTGCTACAAGTGGCCCAACACACCCATGTGCTGGAGCTTTTGCCCGAGAATGTCAGCCTGAC > 2:1640027/1‑150 TCTACGCGCTGGCCGATAGGCTGGGCGCGTAGAGGAAATTTTCGACACTGTGCAGCTGCTGCGGGACCAAGGGCTCCACCACCGCTACCTGCTACAAGTGGCCCAACACACCCATGGGCTGGACCGTTTGCCCGAGCACGTCAGCATGga > 2:981183/1‑148 TACGCGCTGGCCGATAGGCTGGGCGCGTAGAGGAAATTTTCGACACTGTGCAGCTGCTGCGGGACCAAGGGCTCCACCACCGCTACCTGCTACAAGTGG < 1:2222128/99‑1 TACGCGCTGGCCGATAGGCTGGGCGCGTAGAGGAAATTTTCGACACTGTGCAGCTGCTGCGGGACCAAGGGCTCCACCACCGCTACCTGCTACAAGTGG > 2:2222128/1‑99 CGCGTAGAGGAAATTTTCGACACTGTGCAGCTGCTGCGGGACCAAGGGCTCCACCACCGCTACCTGCTACAAGTGGCCCAACACACCCATGTGCTGGAGCTTTTGCCCGAGCATGTCAGCCTGACGACCCTGGCCGAGCATGAGGCGCTG < 2:1334843/150‑1 GCGTAGAGGAAATTTTCGACACTGTGCAGCTGCTGCGGGACCAAGGGCTCCACCACCGCTACCTGCTACAAGTGGCCCAACACACCCATGTGCTGGAGCTTTTGCCCGAGCATGTCAGCCTTACGACCCTGGCCGAGCATGAGGCGCTGC < 2:1251617/150‑1 CGTAGAGGAAATTTTCGACACTGTGCAGCTGCTGCGGGACCAAGGGCTCCACCACCGCTACCTGCTACAAGTGGCCCAACACACCCATGTGCTGGAGCTTTTGCCCGAGAATGTCAGCCTGACGACCCTGGCCGAGCATGAGGCGCTGCT < 1:1640027/150‑1 GTAGAGGAAATTTTCGACACTGTGCAGCTGCTGCGGGACCAAGGGCTCCACCACCGCTACCTGCTACAAGTGGCCCAACACACCCATGTGCTGGAGCTTTTGCCCGAGCATGTCAGCCTGACGGCCCTGGCCGAGCATGAGGCGCTGCTG < 1:2144119/150‑1 CAGGGTCGTCAGGCTGACATGCTCGGGCAAAAGCTCCAGCACATGGGTGTGTTGGGCCACTTGTAGCAGGTAGCGGTGGTGGAGCCCTTGGTCCCGCAGCAGCTGCACAGTGTCGAAAATTTCCTCTACGCGCTGGCCGATAGGCTGGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5958788‑5958636‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgTAGAGGAAATTTTCGACACTGTGCAGCTGCTGCGGGACCAAGGGCTCCACCACCGCTACCTGCTACAAGTGGCCCAACACACCCATGTGCTGGAGCTTTTGCCCGAGCATGTCAGCCTGACGACCCTGGCCGAGCATGAGGCGCTGCTG > NC_002947/5958661‑5958809 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |