New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 6110579 = | 89 (0.950) | 5 (0.060) | 4/240 | NT | 5.6% | coding (987/1209 nt) | PP_5361 | protein P47K |
? | NC_002947 | 6110619 = | 84 (0.940) | coding (947/1209 nt) | PP_5361 | protein P47K |
GGACTGGGAAAACGGAAGGCTACTGCGTTCCAAAGGGTTTTTCTGGTTGGCCAGCAAATATCAGGAAGCTGGCAGCTGGTCGCAAGCGGGCGGCATGATGCGCCATGGTCTGGCTGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6110732‑6110579 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTGGCCAACCAGAAAAACCCTTTGGAACGCAGTAGCCTTCCGTTTTCCCAGTCCTTGTGGATAAAGTCGTAAAAGCGCTGTGGATGA > NC_002947/6110619‑6110765 GGACTGGGAAAACGGAAGGCTACTGCGTTCCAAAGGGTTTTTCTGGTTGGCCAGCAAATATCAGGAAGCTGGCAGCTGGTCGCAAGCGGGCGGCATGATGCGCCATGGTCTGGCTGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTG < 1:336981/150‑1 ACTGGGAAAACGGAAGGCTACTGCGTTCCAAAGGGTTTTTCTGGTTGGCCAGCAAATATCGGGAAGCTGGCAGCTGGTCGCAAGCGGGCGGCATGATGCGCCATGGTCTGGCTGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTGGC < 2:2224225/150‑1 ACTGGGAAAACGGAAGGCTACTGCGTTCCAAAGGGTTTTTCTGGTTGGCCAGCAAATATCAGGAAGCTGGCAGCTGGTCGCAAGCGGGCGGCATGATGCGCCATGGTCTGGCTGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTGGC < 2:2214141/150‑1 ACTGGGAAAACGGAAGGCTACTGCGTTCCAAAGGGTTTTTCTGGTTGGCCAGCAAATATCAGGAAGCTGGCAGCTGGTCGCAAGCGGGCGGCATGATGCGCCATGGTCTGGCTGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTGG < 1:1867233/149‑1 ACTGGGAAAACGGAAGGCTACTGCGTTCCAAAGGGTTTTTCTGGTTGGCCAGCAAATATCAGGAAGCTGGCAGCTGGTCGCAAGCGGGCGGCATGATGCGCCATGGTCTGGCTGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTGG > 2:1867233/1‑149 AACGGAAGGCTACTGCGTTCCAAAGGGTTTTTCTGGTTGGCCAGCAAATATCAGGAAGCTGGCAGCTGGTCGCAAGCGGGCGGCATGATGCGCCATGGTCTGGCTGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTGGC < 1:1566330/142‑1 AACGGAAGGCTACTGCGTTCCAAAGGGTTTTTCTGGTTGGCCAGCAAATATCAGGAAGCTGGCAGCTGGTCGCAAGCGGGCGGCATGATGCGCCATGGTCTGGCTGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTGGC > 2:1566330/1‑142 AATATCAGGAAGCTGGCAGCTGGTCGCAAGCGGGCGGCATGATGCGCCATGGTCTGGCTGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTGG < 2:608508/95‑1 AATATCAGGAAGCTGGCAGCTGGTCGCAAGCGGGCGGCATGATGCGCCATGGTCTGGCTGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTGG > 1:608508/1‑95 TGGCTGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTGGCCAGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTG > 1:1210361/1‑107 TGGCTGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTGGCCAGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTG < 2:1210361/107‑1 GGCTGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTGGCCAGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTGGCCAACCAGAAAAACCCTTTGGAACGCAGTAGCCTTCCGTTTTC > 2:1008605/1‑150 TGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTGGCCAGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTGGCCAACCAGAAAAACCCTTTGGAACGCAGTAGCCTTCCGTTTTCCCA > 2:2034080/1‑150 TGGCCGCTGGTGGCGCTTCGTGCCAC‑‑‑‑‑CAGCGGCCAGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGCAGAGCAGCCAGCTTCCTGATATTTGCTGGCCAACCTTAAAAACCCTTTGGAACGCAGTAGCCTTCCGTTTTCCCAGTCCT > 1:535423/1‑150 CCAGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTGGCCAACCAGAAAAACCCTTTGGAACGCAGTAGCCTTCCGTTTTCCCAGTCCTTGTGGATAAAGTCGTAAAAGCGCTGTGGATGA > 1:1258470/1‑150 AGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTGGCCAACCAGAAAAACCCTTTGGAACGCAGTAGCCTTCCGTTTTCCCAGTCCTTGTGGATAAAGTCGTAAAAGC < 2:1465620/137‑1 AGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTGGCCAACCAGAAAAACCCTTTGGAACGCAGTAGCCTTCCGTTTTCCCAGTCCTTGTGGATAAAGTCGTAAAAGC > 1:1465620/1‑137 GGACTGGGAAAACGGAAGGCTACTGCGTTCCAAAGGGTTTTTCTGGTTGGCCAGCAAATATCAGGAAGCTGGCAGCTGGTCGCAAGCGGGCGGCATGATGCGCCATGGTCTGGCTGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6110732‑6110579 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTGGCCAACCAGAAAAACCCTTTGGAACGCAGTAGCCTTCCGTTTTCCCAGTCCTTGTGGATAAAGTCGTAAAAGCGCTGTGGATGA > NC_002947/6110619‑6110765 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |