| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6113326 = | 93 (1.000) | 3 (0.030) | 3/236 | NT | 3.5% | coding (400/1446 nt) | clsA | cardiolipin synthase |
| ? | NC_002947 | 6113353 = | 78 (0.890) | coding (427/1446 nt) | clsA | cardiolipin synthase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GACACGGTCGTACAGCACGAACACCTGCACGCCTTCGGCGGCTTTGCGTAGCAAGAGTTGCTGCAGTGCCTTGCCGAGGGTGTCGTCATGAATGATGAAGAACTGCACCAGTACCACATCGCGTGCTTTTTCGATGGCTGCGAAGATGGCATCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6113481‑6113326‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcgaaAAAGCACGCGATGTGGTACTGGTGCAGTTCTTCATCATTCATGACGACACCCTCGGCAAGGCACTGCAGCAACTCTTGCTACGCAAAGCCGCCGAAGGCGTGCAGGTGTTCGTGCTGTACGACCGTGTCGGTAGCCATGCCTTGCCGT > NC_002947/6113353‑6113500 GACACGGTCGTACAGCACGAACACCTGCACGCCTTCGGCGGCTTTGCGTAGCAAGAGTTGCTGCAGTGCCTTGCCGAGGGTGTCGTCATGAATGATGAAGAACTGCCCCAGTACCACATCGCGTGCTTTTTCGATGGCTGCGAAGATGGC > 2:971/1‑150GACACGGTCGTACAGCACGAACACCTGCACGCCTTCGGCGGCTTTGCGTAGCAAGAGTTGCTGCAGTGCCTTGCCGAGGGTGTCGTCATGAATGATGAAGAACTGCACCAGTACCACATCGCGTGCTTTTTCGATGGCTGCGAAGATGGC > 2:1870981/1‑150 ACACGGTCGTACAGCACGAACACCTGCACGCCTTCGGCGGCTTTGCGTAGCAAGAGTTGCTGCAGTGCCTTGCCGAGGGTGTCGTCATGAATGATGAAGAACTGCACCAGTACCACATCGCGTGCTTTTTCGATGGCTGCGAAGATGGCA > 1:953811/1‑150 CACGGTCGTACAGCACGAACACCTGCACGCCTTCGGCGGCTTTGCGTAGCAAGAGTTGCTGCAGTGCCTTGCCGAGGGTGTCGTCATGAATGATGAAGAACTGCACCAGTACCACATCGCGTGCTTTTTCGATGGCTGCGAAGATGGCAT < 2:156655/150‑1 GTCGTACAGCACGAACACCTGCACGCCTTCGGCGGCTTTGCGTAGCAAGAGTTGCTGCAGTGCCTTGCCGAGGGTGTCGTCATGAATGATGAAGAACTGCACCAGTACCACATCGCGTGCTTTTTCGATGGCTTCTAATATGTCATCGAA < 2:344383/150‑1 ACCTGCACGCCTTCGGCGGCTTTGCGTAGCAAGAGTTGCTGCAGTGCCTTGCCGAGGGTGTCGTCATGTATGATGAAGAACTGCACCAGTACCACATCGCGTGCTTTTTCGATGCCATCTTCGCAGCCATCGAAAAAGCACGCGATGTGG < 2:146816/150‑1 TTTTTCGATGGCTGCGAAGATGGCATCGAAAAAGCACGCGATGTGGTACTGGTGCAGTTCTTCATCATTCATGACGACACCCTCGGCAAG > 1:1154644/1‑90 TTTTTCGATGGCTGCGAAGATGGCATCGAAAAAGCACGCGATGTGGTACTGGTGCAGTTCTTCATCATTCATGACGACACCCTCGGCAAG < 2:1154644/90‑1 ATCGAAAAAGCACGCGATGTGGTACTGGTGCAGTTCTTCATCATTCATGACGACACCCTCGGCAAGGCACTGCAGCAACTTCAGCGACGCAAAGCCGCCGAAGGCGTGCAGGTGTTCGTGCTGTACGACCGTGTCGGTAGCCATGCCTTG > 1:1973162/1‑150 ATCGAAAAAGCACGCGATGTGGTACTGGTGCAGTTCTTCATCATTCATGACGACACCCTCGGCAAGGCACTGCAGCAACTCTTGCTACGCAAAGCCGCCGAAGGCGTGCAGGTGTTCGTGCTGTACGACCGTGTCGG < 1:1726655/137‑1 ATCGAAAAAGCACGCGATGTGGTACTGGTGCAGTTCTTCATCATTCATGACGACACCCTCGGCAAGGCACTGCAGCAACTCTTGCTACGCAAAGCCGCCGAAGGCGTGCAGGTGTTCGTGCTGTACGACCGTGTCGG > 2:1726655/1‑137 GAAAAAGCACGCGATGTGGTACTGGTGCAGTTCTTCATCATTCATGACGACACCCTCGGCAAGGCACTGCAGCAACTCTTGCTACGCAAAGCCGCCGAAGGCGTGCAGGTGTTCGTGCTGTACGACCGTGTCGGTAGCCATGCCTTGCCG > 2:652073/1‑150 AAAAAGCACGCGATGTGGTACTGGTGCAGTTCTTCATCATTCATGACGACACCCTCGGCAAGGCACTGCAGCAACTCTTGCTACGCAAAGCCGCCGAAGGCGTGCAGGTGTTCGTGCTGTACGACCGTGTCGGTAGCCATGCCTTGCCGT > 1:2000907/1‑150 GACACGGTCGTACAGCACGAACACCTGCACGCCTTCGGCGGCTTTGCGTAGCAAGAGTTGCTGCAGTGCCTTGCCGAGGGTGTCGTCATGAATGATGAAGAACTGCACCAGTACCACATCGCGTGCTTTTTCGATGGCTGCGAAGATGGCATCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6113481‑6113326‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcgaaAAAGCACGCGATGTGGTACTGGTGCAGTTCTTCATCATTCATGACGACACCCTCGGCAAGGCACTGCAGCAACTCTTGCTACGCAAAGCCGCCGAAGGCGTGCAGGTGTTCGTGCTGTACGACCGTGTCGGTAGCCATGCCTTGCCGT > NC_002947/6113353‑6113500 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |