New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 668061 =67 (0.720)5 (0.070) 5/202 NT 8.7% intergenic (+22/+130) yfhM/PP_0571 lipoprotein/membrane protein
?NC_002947 668178 = 51 (0.680)intergenic (+139/+13) yfhM/PP_0571 lipoprotein/membrane protein

TGTACCTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCA  >  NC_002947/667912‑668210
                                                                                                                                                     |                                                                                                                                                     
gctgagcatcctggccctgatcatcggcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgggctgggtgatccactgatctgcgcggtcttt                                                                                                                                                       >  2:699189‑M1/150‑150 (MQ=255)
  tgagcatcctggccctgatcatcggcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtctttgt                                                                                                                                                     >  2:1489696‑M1/148‑150 (MQ=255)
  tgagcatcctggccctgatcatcggcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcgggctttgt                                                                                                                                                     <  1:81282‑M1/3‑1 (MQ=255)
    ccTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTgg                                                                                                                                                   <  1:1703098/150‑1 (MQ=255)
    ccTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCGACGCGGAAAGTGTgg                                                                                                                                                   <  2:1403283/150‑1 (MQ=255)
     cTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTggg                                                                                                                                                  >  1:675678/1‑150 (MQ=255)
     cTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTggg                                                                                                                                                  >  1:2287924/1‑150 (MQ=255)
      tGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGa                                                                                                                                                 >  2:1100151/1‑150 (MQ=255)
      catcctggccctgatcatcggcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggactcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGa                                                                                                                                                 >  2:81282‑M1/144‑150 (MQ=255)
      catcctggccctgatcatcggcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGa                                                                                                                                                 >  1:509555‑M1/144‑150 (MQ=255)
      catcctggccctgatcatcggcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGa                                                                                                                                                 <  2:1696661‑M1/7‑1 (MQ=255)
      catcctggccctgatcatcggcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGa                                                                                                                                                 >  1:1270202‑M1/144‑150 (MQ=255)
           tggccctgatcatcggcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGc                                                                                                                                            <  2:2333769‑M1/12‑1 (MQ=255)
              gCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCtt                                                                                                                                         <  1:218087/150‑1 (MQ=255)
              ccctgatcatcggcctgatgctgctgtcctcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGCCtt                                                                                                                                         >  1:1164087‑M1/136‑150 (MQ=255)
              ccctgatcatcggcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGCCtt                                                                                                                                         >  1:977587‑M1/136‑150 (MQ=255)
               cAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTgg                                                                                                                                                   >  2:1140104/1‑139 (MQ=255)
               cAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTgg                                                                                                                                                   <  1:1140104/139‑1 (MQ=255)
                ctgatcatcggcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGCCTTGc                                                                                                                                       <  2:1762946‑M1/17‑1 (MQ=255)
                  tGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGt                                                                                                                                     <  1:925903/150‑1 (MQ=255)
                     catcggcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGCCTTGCGTcgc                                                                                                                                  >  2:331085‑M1/129‑150 (MQ=255)
                      cccGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTGCGCGGTCTTTGTGGGAGCGGCCTTGCGTcgcg                                                                                                                                 >  1:845792/1‑150 (MQ=39)
                      atcggcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGCCTTGCGTcgcg                                                                                                                                 <  1:1211633‑M1/23‑1 (MQ=255)
                         gggCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATa                                                                                                                              <  2:2287924/150‑1 (MQ=255)
                         gggCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATa                                                                                                                              <  1:1190382/150‑1 (MQ=255)
                          ggCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAg                                                                                                                             <  2:2309394/150‑1 (MQ=255)
                          gcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGAGc                                                                                                                                               <  2:547719‑M1/9‑1 (MQ=255)
                          gcctgatgctgctgtactcggcaatccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGAGc                                                                                                                                               >  1:547719‑M1/124‑132 (MQ=255)
                            cACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAggg                                                                                                                           <  2:66292/150‑1 (MQ=255)
                            cACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCCAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAggg                                                                                                                           <  1:1634119/150‑1 (MQ=255)
                               cTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCg                                                                                                                        >  2:1198419/1‑150 (MQ=255)
                                 aCCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGct                                                                                                                      >  2:651529/1‑149 (MQ=255)
                                     cgTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGc                                                                                                                  <  2:144213/150‑1 (MQ=255)
                                           gccgccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGc                                                                                                                  >  1:37672/1‑144 (MQ=255)
                                           gccgccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGc                                                                                                                  <  2:37672/144‑1 (MQ=255)
                                           gccgccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGcccc                                                                                                            <  1:1198419/150‑1 (MQ=255)
                                           gccgccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGcccc                                                                                                            >  2:756011/1‑150 (MQ=255)
                                             cgccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGa                                                                                                          <  2:2273007/150‑1 (MQ=255)
                                                cgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACaa                                                                                                       <  1:798431/150‑1 (MQ=255)
                                                 gcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGcc                                                                                                                         <  2:1538273/131‑1 (MQ=255)
                                                 gcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGcc                                                                                                                         >  1:1538273/1‑131 (MQ=255)
                                                  tccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtctttgt                                                                                                                                                     >  1:174003‑M1/100‑102 (MQ=255)
                                                  tccgcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtctttgt                                                                                                                                                     <  2:174003‑M1/3‑1 (MQ=255)
                                                     gcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTgg                                                                                                                                                   >  2:2191447‑M1/97‑101 (MQ=255)
                                                     gcgcattcatgcgcgcctcgatcatcctcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTgg                                                                                                                                                   <  1:2191447‑M1/5‑1 (MQ=255)
                                                     gTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCaa                                                                                                  >  1:2078428/1‑150 (MQ=255)
                                                      tCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGa                                                                                                                                                 <  2:299510/102‑1 (MQ=255)
                                                      tCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGa                                                                                                                                                 >  1:299510/1‑102 (MQ=255)
                                                          aTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCCATAGGGCCGCAAAGCGGCCCCGACAATTCAAgcggc                                                                                             >  2:897332/1‑150 (MQ=255)
                                                           tCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAgcggcg                                                                                            >  2:1235798/1‑150 (MQ=255)
                                                           tCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAGATGGCCGCAAAGCGGCCCCGACAATTCAAgcggcg                                                                                            >  1:14433/1‑150 (MQ=255)
                                                              aTGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGtgtg                                                                                                                                                    <  2:432569/91‑1 (MQ=255)
                                                              aTGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGtgtg                                                                                                                                                    >  1:432569/1‑91 (MQ=255)
                                                              aTGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAg                                                                                         >  1:637734/1‑150 (MQ=255)
                                                                    cGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGaaa                                                                                   <  2:2062225/150‑1 (MQ=255)
                                                                    cGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGaaa                                                                                   <  2:637734/150‑1 (MQ=255)
                                                                         gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg                                                                              <  2:675678/150‑1 (MQ=255)
                                                                         gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg                                                                              <  1:873728/150‑1 (MQ=255)
                                                                           aCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTTTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGc                                                                                                                  <  1:459658/112‑1 (MQ=255)
                                                                           aCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGc                                                                                                                  >  2:459658/1‑112 (MQ=255)
                                                                           aCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTggg                                                                            <  1:1100151/150‑1 (MQ=255)
                                                                            ccTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgggg                                                                           <  2:1666785/150‑1 (MQ=255)
                                                                            ccTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgggg                                                                           <  2:1670893/150‑1 (MQ=255)
                                                                                tcggaatcatctggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgc                                                                       <  2:2156398‑M1/81‑1 (MQ=255)
                                                                                         ggCGATGGGCAAGGGGAGATGACGGTGACAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGcc                                                              <  2:979771/150‑1 (MQ=255)
                                                                                         ggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGcc                                                              <  1:756011/150‑1 (MQ=255)
                                                                                         ggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGcc                                                              <  2:979278/150‑1 (MQ=255)
                                                                                         ggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGcc                                                              <  1:1833841/150‑1 (MQ=255)
                                                                                            ggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtctttgt                                                                                                                                                     >  1:2324818‑M1/58‑60 (MQ=255)
                                                                                            ggctggtgctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtctttgt                                                                                                                                                     <  2:2324818‑M1/3‑1 (MQ=255)
                                                                                            gATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTg                                                           >  2:852188/1‑150 (MQ=255)
                                                                                                ggCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGTGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGcc                                                              <  2:2224236/143‑1 (MQ=255)
                                                                                                ggCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGTGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGcc                                                              >  1:2224236/1‑143 (MQ=255)
                                                                                                 gCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTcgcg                                                      >  1:1814754/1‑150 (MQ=255)
                                                                                                  cAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGa                                                     <  1:2021056/150‑1 (MQ=255)
                                                                                                   gctggggctgtgggtgatgagctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGAc                                                    >  1:2420558‑M1/51‑150 (MQ=255)
                                                                                                   aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGAc                                                    <  2:2078428/150‑1 (MQ=255)
                                                                                                     ggggAGATGACGGTGAAATCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGc                                                  >  2:192307/1‑150 (MQ=255)
                                                                                                      gggAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCa                                                 >  1:526220/1‑150 (MQ=255)
                                                                                                       ggAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCaa                                                <  2:526220/150‑1 (MQ=255)
                                                                                                          gaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGc                                             <  1:1235798/150‑1 (MQ=255)
                                                                                                                  tGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTcccc                                     >  2:704557/1‑149 (MQ=255)
                                                                                                                   atgagctgggtgatccactgatctgcgcggtcttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCcac                                    >  1:2156398‑M1/35‑150 (MQ=255)
                                                                                                                       gCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATACAGCCGCAAAGCGGCATCTTCAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAg                                >  1:2123633/1‑150 (MQ=38)
                                                                                                                        cccGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTcg                                                        >  1:942947/1‑125 (MQ=255)
                                                                                                                        cccGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTcg                                                        <  2:942947/125‑1 (MQ=255)
                                                                                                                         ccGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACCAAGAc                              >  2:767122/1‑150 (MQ=255)
                                                                                                                         ccGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGAc                              >  1:1417935/1‑150 (MQ=255)
                                                                                                                             tAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg                                                                              >  1:1488947/1‑98 (MQ=255)
                                                                                                                             tAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg                                                                              <  2:1488947/98‑1 (MQ=255)
                                                                                                                             tAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACcgcg                          >  1:631193/1‑150 (MQ=255)
                                                                                                                               gagaCCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCa                        <  2:631193/150‑1 (MQ=255)
                                                                                                                                 gaCCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGa                      <  2:1417935/150‑1 (MQ=255)
                                                                                                                                   actgatctgcgcggtcttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAg                                                                >  1:2315544‑M1/19‑106 (MQ=255)
                                                                                                                                   actgatctgcgcggtcttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAg                                                                <  2:2315544‑M1/88‑1 (MQ=255)
                                                                                                                                    ccGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCa                   >  2:1900258/1‑150 (MQ=255)
                                                                                                                                     cgcgCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAg                  <  2:2341560/150‑1 (MQ=255)
                                                                                                                                              cgGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGc                                                               <  1:995019/96‑1 (MQ=255)
                                                                                                                                              cgGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGc                                                               >  2:995019/1‑96 (MQ=255)
                                                                                                                                                     TGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCtca  <  1:776547‑M1/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TGTACCTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCA  >  NC_002947/667912‑668210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.