New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2202510 =75 (0.800)4 (0.050) 4/236 NT 5.2% coding (144/990 nt) PP_1947 hypothetical protein
?NC_002947 2202554 = 74 (0.840)coding (188/990 nt) PP_1947 hypothetical protein

GTTCAATTGAACAATCAAGATTTGGTTAAGGTGCTTGAAACGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGCCCCCATTACCGATCT  >  NC_002947/2202361‑2202659
                                                                                                                                                     |                                                                                                                                                     
gacttcctccatgagcaagaaacggcgctcatgctcaatcatcagatcggtaatgggggcatgtgccagtgctgtactcgtcaggtaaacgacaaggtcgttgctcgggtccagggcgcccgaaacgatggatggaatagggtcctgagc                                                                                                                                                       <  1:2067180‑M1/1‑1 (MQ=255)
gTTCAATTGAACAATCAAGATTTGGTTAAGGTGCTTGAAACGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTcc                                                                                                                                                       <  2:2442992/150‑1 (MQ=255)
 acttcctccatgagcaagaaacggcgctcatgctcaatcatcagatcggtaatgggggcatgtgccagtgctgtactcgtcaggtaaacgacaaggtcgttgctcgggtccagggcgcccgaaacgatggatggaatagggtcctgagCa                                                                                                                                                      >  1:2334729‑M1/149‑150 (MQ=255)
   ttcctccatgagcaagaaacggcgctcatgctcaatcatcagatcggtaatgggggcatgtgccagtgctgtactcgtcaggtaaacgacaaggtcgttgctcgggtccagggcgcccgaaacgatggatggaatagggtcctgagCATg                                                                                                                                                    <  1:655887‑M1/4‑1 (MQ=255)
   ttcctccatgagcaagaaacggcgctcatgctcaatcatcagatcggtaatgggggcatgtgccagtgctgtactcgtcaggtaaacgacaaggtcgtatcgcgggtccagggcgcccgaaacgatggatggaatagggtcctgagCATg                                                                                                                                                    <  1:2367864‑M1/4‑1 (MQ=255)
   cAATTGAACAATCAAGATTTGGTTAAGGTGCTTGAAACGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATg                                                                                                                                                    <  1:1117257/150‑1 (MQ=255)
    tcctccatgagcaagaaacggcgctcatgctcaatcatcagatcggtaatgggggcatgtgccagtgctgtactcgtcaggtaaacgacaaggtcgttgctcgggtccagggcgcccgaaacgatggatggaatagggtcctgagCATgg                                                                                                                                                   <  2:2317508‑M1/5‑1 (MQ=255)
      ttGAACAATCAAGATTTGGTTAAGGTGCTTGAAACGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGaa                                                                                                                                                 >  2:2304690/1‑150 (MQ=255)
         aaCAATCAAGATTTGGTTAAGGTGCTTGAAACGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAAccc                                                                                                                                              >  2:2035503/1‑150 (MQ=255)
            aaTCAAGATTTGGTTAAGGTGCTTGAAACGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACg                                                                                                                                           >  2:2249816/1‑150 (MQ=255)
              tCAAGATTTGGTTAAGGTGCTTGAAACGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCGCGGt                                                                                                                                         >  1:727843/1‑150 (MQ=255)
              gcAAGATTTGGTTAAGGTGCTTGAAACGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGt                                                                                                                                         >  2:550070/2‑150 (MQ=255)
               cAAGATTTGGTTAAGGTGCTTGAAACGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGtt                                                                                                                                        <  1:2304690/150‑1 (MQ=255)
                     ttGGTTAAGGTGCTTGAAACGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATc                                                                                                                                  >  2:2173713/1‑150 (MQ=255)
                     ttGGTTAAGGTGCTTGAAACGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATc                                                                                                                                  <  1:2249816/150‑1 (MQ=255)
                       ggTTAAGGTGCTTGAAACGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCAt                                                                                                                                <  2:1670061/150‑1 (MQ=255)
                       ggTTAAGGTGCTTGAAACGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCAt                                                                                                                                <  2:468540/150‑1 (MQ=255)
                       ggTTAAGGTGCTTGAAACGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCAt                                                                                                                                <  1:355276/150‑1 (MQ=255)
                         ttANGGTGCTTGAAACGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGc                                                                                                                              >  2:1517660/1‑150 (MQ=255)
                               tGCTTGAAACGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGAACTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACcgc                                                                                                                        >  1:1844443/1‑150 (MQ=255)
                                       aCGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTc                                                                                                                >  2:2067180/1‑150 (MQ=255)
                                         gCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCAt                                                                                                                                <  2:2347428/132‑1 (MQ=255)
                                         gCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCAt                                                                                                                                >  1:2347428/1‑132 (MQ=255)
                                         gCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCa                                                                                                              >  2:2051393/1‑150 (MQ=255)
                                         gCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCa                                                                                                              >  2:2051381/1‑150 (MQ=255)
                                          ccTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCAt                                                                                                             <  1:240574/150‑1 (MQ=255)
                                             ttGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCt                                                                                                          <  2:1108131/150‑1 (MQ=255)
                                              tGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTc                                                                                                         <  1:2184972/150‑1 (MQ=255)
                                              tGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTc                                                                                                         <  1:1679623/150‑1 (MQ=255)
                                                  gTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGa                                                                                                     >  2:2049181/1‑150 (MQ=255)
                                                     aaaTGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGAccc                                                                                                  >  1:836430/1‑150 (MQ=255)
                                                     aaaTGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCCCAGGAccc                                                                                                  >  1:1667025/1‑150 (MQ=255)
                                                        gggcatgtgccagtgctgtactcgtcaggtaaacgacaaggtcgttgctcgggtccagggcgcccgaaacgatggatggaatagggtcctgagCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTAt                                                                                               <  2:1036099‑M1/57‑1 (MQ=255)
                                                           gAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGaa                                                                                                                                                 >  2:1220643/1‑97 (MQ=255)
                                                           gAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGaa                                                                                                                                                 <  1:1220643/97‑1 (MQ=255)
                                                             tgtgccagtgctgtactcgtcaggtaaacgacaaggtcgttgctcgggtccagggcgcccgaaacgatggatggaatagggtcctgagCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATtccat                                                                                          >  1:1036099‑M1/89‑150 (MQ=255)
                                                                 aGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATtccatc                                                                                         <  1:1437838/147‑1 (MQ=255)
                                                                 aGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATtccatc                                                                                         >  2:1437838/1‑147 (MQ=255)
                                                                              tataTTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCTcc                                                                         >  1:1166203/1‑150 (MQ=255)
                                                                                tattatTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCt                                                                       >  2:445597/1‑150 (MQ=255)
                                                                                 attattACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGa                                                                                                                                    >  2:1215059/1‑88 (MQ=255)
                                                                                 attattACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGa                                                                                                                                    <  1:1215059/88‑1 (MQ=255)
                                                                                     ttaCCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGAcc                                                                  >  1:688511/1‑150 (MQ=255)
                                                                                      taCCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGAccc                                                                 <  1:1644212/150‑1 (MQ=255)
                                                                                       aCCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTg                                                                                                                                       <  1:439172/79‑1 (MQ=255)
                                                                                       aCCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTg                                                                                                                                       >  2:439172/1‑79 (MQ=255)
                                                                                       aCCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCg                                                                >  1:698713/1‑150 (MQ=255)
                                                                                       aCCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCACGCGCCTTCCATGCTCAGGCCCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCg                                                                >  1:1194325/1‑150 (MQ=255)
                                                                                        ccGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGa                                                               <  2:517055/150‑1 (MQ=255)
                                                                                           aTACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGa                                                               >  1:862550/1‑147 (MQ=255)
                                                                                           aTACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGa                                                               <  2:862550/147‑1 (MQ=255)
                                                                                               tGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGa                                                        >  2:1654614/1‑150 (MQ=255)
                                                                                                gtcgttgctcgggtccagggcgcccgaaacgatggatggaatagggtcctgagCATGGAACCCACGGTTGCGATCATGc                                                                                                                              >  1:7685‑M1/54‑79 (MQ=255)
                                                                                                gtcgttgctcgggtccagggcgcccgaaacgatggatggaatagggtcctgagCATGGAACCCACGGTTGCGATCATGc                                                                                                                              <  2:7685‑M1/26‑1 (MQ=255)
                                                                                                gCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGAc                                                       <  1:1654614/150‑1 (MQ=255)
                                                                                                gCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGAc                                                       <  1:1758252/150‑1 (MQ=255)
                                                                                                    tGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTg                                                   <  1:2051381/150‑1 (MQ=255)
                                                                                                    tGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTg                                                   <  1:2051393/150‑1 (MQ=255)
                                                                                                      gAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTc                                                 <  1:445597/150‑1 (MQ=255)
                                                                                                       aGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCg                                                >  1:2243149/1‑150 (MQ=255)
                                                                                                         cccGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGTCCCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGtt                                              <  2:845287/150‑1 (MQ=255)
                                                                                                         cccGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGtt                                              >  2:985440/1‑150 (MQ=255)
                                                                                                          ccGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGttt                                             >  1:2269477/1‑150 (MQ=255)
                                                                                                           cGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATtccatc                                                                                         <  2:2428579/105‑1 (MQ=255)
                                                                                                           cGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATtccatc                                                                                         >  1:2428579/1‑105 (MQ=255)
                                                                                                           cGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTa                                            >  2:1686795/1‑150 (MQ=255)
                                                                                                            gAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGccc                                                                        >  1:454623/1‑121 (MQ=255)
                                                                                                            gAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGccc                                                                        <  2:454623/121‑1 (MQ=255)
                                                                                                                  tGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACg                                     >  2:310860/1‑150 (MQ=255)
                                                                                                                   ccgatctccTCTCCCAAGCAGCGGTGAATCTTTCCATGTTGTGCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGa                                    <  1:24006/143‑1 (MQ=255)
                                                                                                                    gCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGttt                                                                                 <  2:2165127/104‑1 (MQ=255)
                                                                                                                    gCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGttt                                                                                 >  1:2165127/1‑104 (MQ=255)
                                                                                                                       ggCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTAc                                <  1:2035503/150‑1 (MQ=255)
                                                                                                                        gCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACa                               >  2:655887/1‑150 (MQ=255)
                                                                                                                         cccTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAg                              >  1:660590/1‑150 (MQ=255)
                                                                                                                          ccTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGc                             >  1:2317508/1‑150 (MQ=255)
                                                                                                                                ccAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGc                       >  1:2244590/1‑150 (MQ=255)
                                                                                                                                ccAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGc                       >  1:1493342/1‑150 (MQ=255)
                                                                                                                                ccAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGc                       >  1:1142975/1‑150 (MQ=255)
                                                                                                                                  aaGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTTTCGTTGACCTTACGAGTACAGCACTGGcac                     <  2:1844443/150‑1 (MQ=255)
                                                                                                                                    gcagcGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACAt                   <  1:2049181/150‑1 (MQ=255)
                                                                                                                                         ggTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGcccc              >  1:71997/1‑150 (MQ=255)
                                                                                                                                          gTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGccccc             >  1:794452/1‑150 (MQ=255)
                                                                                                                                            gAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGCCCCCAt           >  2:1409343/1‑150 (MQ=255)
                                                                                                                                            gAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGCCCCCAt           <  2:2243149/150‑1 (MQ=255)
                                                                                                                                               tCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGCCCCCATTAc        <  1:1409343/150‑1 (MQ=255)
                                                                                                                                                 tttCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCgg                                                                              <  1:1168970/78‑1 (MQ=255)
                                                                                                                                                 tttCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCgg                                                                              >  2:1168970/1‑78 (MQ=255)
                                                                                                                                                 tttCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGCCACACGCCCCCactcccc      >  2:748716/1‑144 (MQ=255)
                                                                                                                                                   tCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGc                 <  1:1832957/137‑1 (MQ=255)
                                                                                                                                                   tCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGc                 >  2:1832957/1‑137 (MQ=255)
                                                                                                                                                    ccATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGCCCCCATTACCGATc   <  2:1883858/150‑1 (MQ=255)
                                                                                                                                                     CATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGCCCCCATTACCGATCt  >  2:660590‑M1/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GTTCAATTGAACAATCAAGATTTGGTTAAGGTGCTTGAAACGCCTTTGAAGTTAAATGCGAAATCAGGCGAGCAGATTTATATTATTACCGATACTGCGATGGAGCCCGAAGTCTGGCAGGCCCTCTCCCAAGCAGCGGTGAATCTTTCCATGGAACCCACGGTTGCGATCATGCAACCGCGCGCCTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGCCCCCATTACCGATCT  >  NC_002947/2202361‑2202659

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.