New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3029319 =	88 (0.940)	6 (0.070)	5/246	NT	6.6%	coding (929/1653 nt)	pcaY	aromatic acid chemoreceptor
	?	NC_002947	3029358 =	84 (0.910)					coding (968/1653 nt)	pcaY	aromatic acid chemoreceptor

TCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCA  >  NC_002947/3029172‑3029465                                                                                                                                                     |                                                                                                                                                   tCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGgccg                                                                                                                                                  >  2:1903475/1‑150 (MQ=255) tCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGgccg                                                                                                                                                  >  1:666440/1‑150 (MQ=255)  ccAGCGCATGCAGCAGAGTCAGCGCGACACTCTGGGGCAGATCAACAACTGGGCCCGGCTGCTGGACGCCGCCGACCCGGCGTTTAACTCGATCACCGAGTACAGCCCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGgccgc                                                                                                                                                 <  1:886219/150‑1 (MQ=255)   cAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGgccgcc                                                                                                                                                >  1:550000/1‑150 (MQ=255)    aGCGCATGCAGCAGAGCCAGCGCGACGCTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGTGGCAGGAGCTGGAG‑CAGGCCGCCa                                                                                                                                               >  2:1210833/1‑150 (MQ=255)          tGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCg                                                                                                                                         <  2:640862/150‑1 (MQ=255)           gcagcaGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGt                                                                                                                                        <  2:92578/150‑1 (MQ=255)             agcagcGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGa                                                                                                                                      <  2:1877358/150‑1 (MQ=255)             agcagAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGa                                                                                                                                      <  2:741043/150‑1 (MQ=255)             agcagAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGa                                                                                                                                      >  2:2024703/1‑150 (MQ=255)                   gCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGaaa                                                                                                                                <  1:1321243/150‑1 (MQ=255)                    ccAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGTAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAAt                                                                                                                               >  1:2096972/1‑150 (MQ=255)                    ccAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGaaa                                                                                                                                >  1:1384067/1‑149 (MQ=255)                    ccAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGaaa                                                                                                                                <  2:1384067/149‑1 (MQ=255)                    ccAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAAt                                                                                                                               >  1:1872038/1‑150 (MQ=255)                         gcgACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCa                                                                                                                          <  2:1872038/150‑1 (MQ=255)                         gcgACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCa                                                                                                                          <  2:701346/150‑1 (MQ=255)                            acacTCTGGGGCAGATCAACAACTGTGCCCGACAGCTGGCCGCCGCCGCGATGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACgg                                                                                                                       >  1:648731/1‑150 (MQ=255)                                tctGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGt                                                                                                                   <  1:1680380/150‑1 (MQ=255)                                tctGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGt                                                                                                                   >  1:1512042/1‑150 (MQ=255)                                 ctGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTg                                                                                                                  <  1:1903475/150‑1 (MQ=255)                                   ggggCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CATGCCGCCACTGCCGTGACCGAAATGACCACGGCATTgga                                                                                                                <  2:648731/150‑1 (MQ=255)                                   ggggCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTgga                                                                                                                <  2:2163877/150‑1 (MQ=255)                                     ggCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTggagg                                                                                                              <  1:2024703/150‑1 (MQ=255)                                      tcatggcttcggtgccgtcgatgttttcgctgacttgccggcggctttgcgcggccagctggttggattcactggtggtttgcgaggtggtgatcgcgttgcgcgcaacttCCGCCACTGCCGTGACCGAAATGACCACGGCAGTggagg                                                                                                              <  2:2212399‑M1/39‑1 (MQ=255)                                      gCAGATAAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAA‑CAGGCCGCCACTGCCGGGATCGAAATGGCCACTGCAGTggagga                                                                                                             >  2:1098599/1‑150 (MQ=255)                                       cAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCACCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGaa                                                                                                            <  2:1632134/150‑1 (MQ=255)                                        aGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTg                                                                                                                  <  1:346333/143‑1 (MQ=255)                                        aGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTg                                                                                                                  >  2:346333/1‑143 (MQ=255)                                           tCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTg                                                                                                        >  1:827980/1‑150 (MQ=255)                                             ttcggtgccgtcgatgttttcgctgacttgccggcggctttgcgcggccagctggttggattcactggtggtttgcgaggtggtgatcgcgttgcgcgcaacttCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTgc                                                                                                       >  1:2212399‑M1/105‑150 (MQ=255)                                             aacaacTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAGATGACCACGGCAGTGGAGGAAGTTgcg                                                                                                      <  2:1408691/150‑1 (MQ=255)                                              acaacTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTC‑GCCGGGGCCGGGCGGGGAGCCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTgcgc                                                                                                     >  1:876837/1‑150 (MQ=255)                                                  cTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCaa                                                                                                 <  2:666440/150‑1 (MQ=255)                                                         cGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATc                                                                                          >  1:2280217/1‑150 (MQ=255)                                                         cGGCAGCGGGACTCCGCCGCCACGGCGTTGAACGCCGTGACCGAGGAAAGCGCCAACAACCTGCGTCATCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATc                                                                                          <  1:118891/150‑1 (MQ=255)                                                             aGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATcacca                                                                                      >  2:2453567/1‑150 (MQ=255)                                                              gCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGATCAAGTTGCGCGCAACGCGATcaccac                                                                                     <  1:1640484/150‑1 (MQ=255)                                                              gCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATcaccac                                                                                     <  2:931137/150‑1 (MQ=255)                                                                tGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCt                                                                                   >  2:973956/1‑150 (MQ=255)                                                                tGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCt                                                                                   >  1:425771/1‑150 (MQ=255)                                                                tGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCt                                                                                   >  1:365745/1‑150 (MQ=255)                                                                 ggACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTc                                                                                  <  1:806075/150‑1 (MQ=255)                                                                  gACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCg                                                                                 >  2:1618128/1‑150 (MQ=255)                                                                  ccagctgccgccACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCg                                                                                 <  1:323775/144‑1 (MQ=255)                                                                          cgccACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAaccac                                                                         <  2:2280217/150‑1 (MQ=255)                                                                          cgccACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAaccac                                                                         <  1:408060/150‑1 (MQ=255)                                                                               cGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTg                                                                    >  2:423104/1‑150 (MQ=255)                                                                                ggCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGa                                                                   >  1:1252916/1‑150 (MQ=255)                                                                                 gCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGaa                                                                  <  2:2408155/150‑1 (MQ=255)                                                                                  cGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAAt                                                                 <  1:741386/150‑1 (MQ=255)                                                                                   tttgcgcggccagctggttggattcactggtggtttgcgaggtggtgatcgcgttgcgcgcaacttCCTCCACTGCCGTGACCGAAATGACCACGGCAGTgga                                                                                                                <  1:993730‑M1/37‑1 (MQ=255)                                                                                   tttgcgcggccagctggttggattcactggtggtttgcgaggtggtgatcgcgttgcgcgcaacttCCTCCACTGCCGTGACCGAAATGACCACGGCAGTgga                                                                                                                >  2:993730‑M1/67‑103 (MQ=255)                                                                                   tttgcgcggccagctggttggattcactggtggtttgcgaggtggtgatcgcgttgcgcgcaacttCCGCCACTGCCGTGACCGAAATGACCACGGCAGt                                                                                                                   >  2:1057708‑M1/67‑100 (MQ=255)                                                                                   tttgcgcggccagctggttggattcactggtggtttgcgaggtggtgatcgcgttgcgcgcaacttCCGCCACTGCCGTGACCGAAATGACCACGGCAGt                                                                                                                   <  1:1057708‑M1/34‑1 (MQ=255)                                                                                   gTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATc                                                                <  2:1023803/150‑1 (MQ=255)                                                                                      gAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCaa                                                             <  1:30645/150‑1 (MQ=255)                                                                                       aaCGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAAc                                                            <  2:365745/150‑1 (MQ=255)                                                                                           ccGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGc                                                        <  2:1576594/150‑1 (MQ=255)                                                                                            cGTCACCGAGGAAAGCGCAAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGACGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTAGCAAACAACCAGTGAATCTAACCAGCt                                                       >  1:1169666/1‑150 (MQ=255)                                                                                             gTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAaccac                                                                         >  1:1872772/1‑131 (MQ=255)                                                                                             gTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAaccac                                                                         <  2:1872772/131‑1 (MQ=255)                                                                                              tCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑TAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTgg                                                     <  2:1252916/150‑1 (MQ=255)                                                                                                   gAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGAc                                                                                                                            >  2:409029/1‑74 (MQ=255)                                                                                                   gAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGAc                                                                                                                            <  1:409029/74‑1 (MQ=255)                                                                                                    aGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCgcgc                                               <  1:973956/150‑1 (MQ=255)                                                                                                       aaaGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCaaa                                            <  2:1547118/150‑1 (MQ=255)                                                                                                       aaaGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAA‑CAGGCCGCCACTGCCGTGACCGAAATGACCCCGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCaaa                                            <  1:158132/150‑1 (MQ=255)                                                                                                        aaGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAg                                           >  1:771225/1‑150 (MQ=255)                                                                                                             ccAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAgccgcc                                      >  1:1119035/1‑150 (MQ=255)                                                                                                             ccAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAgccgcc                                      >  2:2109993/1‑150 (MQ=255)                                                                                                              caacaaCCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGccgccg                                     >  1:890409/1‑150 (MQ=255)                                                                                                               aacaacCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCgg                                    >  2:517568/1‑150 (MQ=255)                                                                                                               aacaacCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCgg                                    >  2:1858290/1‑150 (MQ=255)                                                                                                               aacaacCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCgg                                    <  2:1119035/150‑1 (MQ=255)                                                                                                                  aacCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTg                                                      >  1:2288871/1‑129 (MQ=255)                                                                                                                  aacCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTg                                                      <  2:2288871/129‑1 (MQ=255)                                                                                                                  aacCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCaa                                 <  2:1121243/150‑1 (MQ=255)                                                                                                                  aacCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGACGCGCAAAGCCGCCGGCaa                                 <  1:2060689/150‑1 (MQ=255)                                                                                                                     cTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCaaa                                            <  2:2232953/136‑1 (MQ=255)                                                                                                                     cTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCaaa                                            >  1:978197/1‑136 (MQ=255)                                                                                                                     cTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCaaa                                            <  2:978197/136‑1 (MQ=255)                                                                                                                     cTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCaaa                                            >  1:2232953/1‑136 (MQ=255)                                                                                                                     cTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTc                              >  2:2285668/1‑150 (MQ=255)                                                                                                                     cTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTc                              >  1:2440628/1‑150 (MQ=255)                                                                                                                         gTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACTACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCaccacc                                                                                    >  2:1716150/1‑92 (MQ=255)                                                                                                                         gTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACTACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCaccacc                                                                                    <  1:1716150/92‑1 (MQ=255)                                                                                                                         gTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCg                          <  2:876837/150‑1 (MQ=255)                                                                                                                               agGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGACCCCAACCAGCTGCCCGCGCAAAGCCGCCGGCAAGTCACCGAAAACa                    >  1:798165/1‑150 (MQ=255)                                                                                                                                   gCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGa                <  1:2554/150‑1 (MQ=255)                                                                                                                                   gCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGa                >  2:355944/1‑150 (MQ=255)                                                                                                                                   gCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGa                <  1:987406/150‑1 (MQ=255)                                                                                                                                     aGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACg              <  2:2260042/150‑1 (MQ=255)                                                                                                                                     aGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACg              <  1:517568/150‑1 (MQ=255)                                                                                                                                        aGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCa           <  1:1098599/150‑1 (MQ=255)                                                                                                                                         gCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCAc          <  2:1669834/150‑1 (MQ=255)                                                                                                                                             gAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACNGaa      <  2:1512042/150‑1 (MQ=255)                                                                                                                                             gAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGaa      >  1:344365/1‑150 (MQ=255)                                                                                                                                                  aGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCa  <  1:423104/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   TCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAG‑CAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCCAACCAGCTGGCCGCGCAAAGCCGCCGGCAAGTCAGCGAAAACATCGACGGCACCGAAGCCA  >  NC_002947/3029172‑3029465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.