| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3319164 = | 75 (0.800) | 9 (0.110) | 8/228 | NT | 10.8% | intergenic (‑85/+107) | treSA/PP_2919 | trehalose synthase A/LysR family transcriptional regulator |
| ? | NC_002947 | 3319249 = | 80 (0.940) | intergenic (‑170/+22) | treSA/PP_2919 | trehalose synthase A/LysR family transcriptional regulator | |||||
Only 100 of 103 total aligned reads displayed.
TGGGAGGCCTTGAGCATGGCGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCA > NC_002947/3319015‑3319313 | tGGGAGGCCTTGAGCATGGCGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGttt > 1:2424727/1‑150 (MQ=255)tGGGAGGCCTTGAGCATGGCGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGAGACCGGAACGTTCGGCTCAAGATGGGTGTTGGttt < 1:2410941/150‑1 (MQ=255)tGGGAGGCCTTGAGCATGGCGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGACTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGttt < 1:2105424/150‑1 (MQ=255) gAGGCCTTGAGCATGGCGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTttct > 1:1871484/1‑149 (MQ=255) gAGGCCTTGAGCATGGCGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTttct < 2:1871484/149‑1 (MQ=255) acgccgatgagcgtggggttggcctggcaccgggaacgggcattcagcccggcgatgcaggcggtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTc > 1:1018962‑M1/146‑150 (MQ=255) acgccgatgagcgtggggttggcctggcaccgggaacgggcattcagcccggcgatgcaggcggtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTc < 2:1442227‑M1/5‑1 (MQ=255) cgttGAGCATGGCGCGGTCTTCGACCCATTTGACGTATGTCGGGTCGGGCTGGGTCACTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTCCGGCTCAAGATGGGTGTTGGTTTCTTcgcg < 1:231601/148‑1 (MQ=255) ttGAGCATGGCGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCggg < 1:1248481/150‑1 (MQ=255) ttGAGCATGGCGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCggg > 2:1967545/1‑150 (MQ=255) ttGAGCATGGCGCGGTCTTCGAGCCATTTGACGTATGAAGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCggg > 1:1435603/1‑150 (MQ=255) gAGCATGGCGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCt < 1:318272/150‑1 (MQ=255) cgGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCAAGCCCGcgaa < 1:1746516/150‑4 (MQ=255) cTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCcaca < 2:1576652/150‑1 (MQ=255) ttCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTCTGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAg < 2:2345231/150‑1 (MQ=255) ttCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTc < 2:1172835/144‑1 (MQ=255) ttCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTc > 1:1172835/1‑144 (MQ=255) ttCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCcaaaa > 1:1602810/1‑147 (MQ=255) cGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCCCCCACAGGc > 2:1611775/1‑150 (MQ=255) gAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGAGCTTGCCCGCTCCCACAGGCg > 2:1212284/1‑150 (MQ=255) gcaccgggaacgggcattcagcccggcgatgcaggcggtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCTTGCCCGCTCCCACAGGCgg < 2:1986864‑M1/31‑1 (MQ=255) tttGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑a > 2:292425/1‑150 (MQ=255) tGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAg > 1:909075/1‑150 (MQ=255) gACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGa < 1:448248/150‑1 (MQ=255) gcccggcgatgcaggcggtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCggg > 2:1976285‑M1/100‑109 (MQ=255) gcccggcgatgcaggcggtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCggg < 1:1976285‑M1/10‑1 (MQ=255) cggcgatgcaggcggtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCt < 2:428480‑M1/54‑1 (MQ=255) tCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCGCCCACAGGCGGGCCT‑ACCGCCGAAGGTTTGCGCTGCagccgt > 2:644864/1‑145 (MQ=255) caggcggtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑Ctgt > 1:1986864‑M1/89‑150 (MQ=255) caggcggtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCGCGCCCGCTCCCACAGGCGGACAT‑TCCGCTGAAGATTTGCGCTGCAC‑Ctgt > 1:918378‑M1/89‑150 (MQ=255) cATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCATGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑Ctgtg < 2:1054720/150‑1 (MQ=255) ggcggtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCGCGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTgg > 1:1973498‑M1/87‑150 (MQ=255) tttCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCt < 1:1764584/126‑1 (MQ=255) tttCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCt > 2:1764584/1‑126 (MQ=255) ggtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAg > 1:1277780‑M1/84‑150 (MQ=255) gcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCgg > 1:428480‑M1/81‑150 (MQ=255) cgTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTcgcg < 1:1456240/88‑1 (MQ=255) gTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTTGCCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTTCGCTGCAC‑CTGTGGGAGCggg > 2:683821/1‑150 (MQ=255) ctctTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGgcgc > 2:935120/1‑150 (MQ=255) ctctTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGAGTTGCGCTGCACACTG‑GTGAGCGGgcgc > 1:2331222/1‑150 (MQ=255) tctTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGgcgcg > 1:210979/1‑150 (MQ=255) tctTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGgcgc > 2:435118/1‑149 (MQ=255) tctTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGgcgc < 1:435118/149‑1 (MQ=255) gCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTcgc > 1:2321259/1‑77 (MQ=255) gCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTcgc < 2:2321259/77‑1 (MQ=255) gtgtCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACCGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGa > 2:2327362/1‑150 (MQ=255) tgtCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGaa < 1:2327362/150‑1 (MQ=255) tgtCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCCCCAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGaa < 1:1730344/150‑1 (MQ=255) atgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAag < 1:188433‑M1/84‑1 (MQ=255) tgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAaga > 2:188433‑M1/66‑150 (MQ=255) tCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAaga < 1:1212284/150‑1 (MQ=255) cGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAagag < 2:210979/150‑1 (MQ=255) gCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTc < 1:104718/83‑1 (MQ=255) gCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTc > 2:104718/1‑83 (MQ=255) gCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAg > 2:106000/1‑129 (MQ=255) gCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAg < 1:106000/129‑1 (MQ=255) gCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGc > 1:1018889/1‑150 (MQ=255) aCCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGc < 1:1391375/148‑1 (MQ=255) aCCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGc > 2:1391375/1‑148 (MQ=255) aCCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCg > 1:516937/1‑150 (MQ=255) cTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCt < 1:935120/150‑1 (MQ=255) tCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGGCGT‑GCGGCCTGGGCTCTCCGCGGCGC‑TTGTGGGAGCGGGCGCGCCCGCGACGAGGCCGGGCCTg < 2:1263986/150‑1 (MQ=255) aGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCa > 1:2241375/1‑150 (MQ=255) aGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCGCCCACAGGCGGCCAT‑ACCGCCTAAGATTTGCGCTGCAG‑CTGCGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCa > 1:627561/1‑150 (MQ=255) gTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCaaa < 1:987413/150‑1 (MQ=255) gTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCACACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCaaa > 1:1686030/1‑150 (MQ=255) ttATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAATATGTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAg < 1:292425/150‑1 (MQ=255) ggCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGAt < 1:1611775/150‑1 (MQ=255) gcgcTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATc > 2:1673893/1‑150 (MQ=255) tGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑Ctgtg > 1:1040986/1‑100 (MQ=255) tGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑Ctgtg < 2:1040986/100‑1 (MQ=255) tGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑Ct > 1:1037634/1‑97 (MQ=255) tGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑Ct < 2:1037634/97‑1 (MQ=255) gCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCgg < 1:2345091/124‑1 (MQ=255) gCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCgg > 2:2345091/1‑124 (MQ=255) cTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCAAAGGCGGACAT‑ACCGCTGAAGATTTGCGCTCCAC‑CTGTGGGAGCGGGCGAGCCCAAGAAAAAGCCGGGCCTGCCAAGGCAGGATCAGCGCCGGGc > 1:257177/1‑150 (MQ=255) cTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCGCCCACAGGCGGACATCACCGC‑GAGGATTTGCGTTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAACGGCCGGAGCTGCGCCgggg > 1:1994158/1‑149 (MQ=255) aaCGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAaga < 2:1564473/113‑1 (MQ=255) aaCGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAaga > 1:1564473/1‑113 (MQ=255) ccGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGAc < 2:1435603/149‑1 (MQ=255) ttCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCCC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAg > 2:791576/1‑129 (MQ=255) ttCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAg < 1:791576/129‑1 (MQ=255) cTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAActgctg > 2:2324833/1‑150 (MQ=255) cAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCg > 2:649400/1‑150 (MQ=255) gATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGt > 2:1820691/1‑149 (MQ=255) gATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGt < 1:1820691/149‑1 (MQ=255) aTGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGc > 2:1756526/1‑150 (MQ=255) ggTGTTGGTTTCTTCGCGGGCTTGCCCACGCCCACAGGCGGACAT‑ACAGCTGAAGATTTGCGCTTCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGACGCCGGGCCTGCAAAGGCAAGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAg > 2:6814/1‑150 (MQ=255) gtTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGaaa < 2:2424727/150‑1 (MQ=255) gtTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGaaa > 1:761503/1‑150 (MQ=255) ttGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCAAAGAGGCCGGGCCTGCAAAGGCAGGATCCGCGCCGGGCCGACAACTCCTGCGGTGCCGGAAAc > 2:424169/1‑150 (MQ=255) ggTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGa < 1:1655806/111‑1 (MQ=255) ggTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGa > 2:1655806/1‑111 (MQ=255) ggTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGGTCAGCGCCGGGCCGACAACTGCTGCGGTGCCGGAAACGc > 2:1485690/1‑150 (MQ=255) ggTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGc < 2:1686030/150‑1 (MQ=255) gTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCg < 2:1956092/93‑1 (MQ=255) gTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCg > 1:1956092/1‑93 (MQ=255) tttCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGAATTAGGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGcaa > 1:1995842/1‑149 (MQ=255) TCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGcatca > 1:1673893‑M1/1‑150 (MQ=255) TCTTCGCGGGCTTGCCCGCGCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGcatca < 1:707623‑M1/150‑1 (MQ=255) | TGGGAGGCCTTGAGCATGGCGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAT‑ACCGCTGAAGATTTGCGCTGCAC‑CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCA > NC_002947/3319015‑3319313 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |