New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 389585885 (0.910)10 (0.110) 6/242 NT 10.4% coding (465/582 nt) PP_3438 membrane protein
?NC_002947 = 3895871 90 (1.000)coding (478/582 nt) PP_3438 membrane protein

Only 100 of 119 total aligned reads displayed.

CCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTAAGGCTTGCACGGCTCCTGCAGGAG  >  NC_002947/3895710‑3895998
                                                                                                                                                     |                                                                                                                                            
ccTGGCACGGCGCAGAGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCctgct                                                                                                                                             >  2:1403168/1‑150 (MQ=255)
   ggCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGctggg                                                                                                                                          <  1:182002/150‑1 (MQ=255)
      aCGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCctgct                                                                                                                                             >  2:661771/1‑144 (MQ=255)
      aCGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGctgggcct                                                                                                                                       >  1:1463361/1‑150 (MQ=255)
        ggCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGctgggcctgg                                                                                                                                     <  2:403100/150‑1 (MQ=255)
           gcAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCtgggcctgggcc                                                                                                                                  <  1:1034503/150‑1 (MQ=255)
            cAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCg                                                                                                                                 <  2:1965735/150‑1 (MQ=255)
                gATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGACGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCcggcccaggcccagcag                                                                                                                             <  1:1706998‑M1/150‑18 (MQ=255)
                   gCAGTGGCTGAACCCCAAAGCCTGGTTGGCCGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTAAATGGATC‑AAGTCTCTCTGTGATGTCAACTCTGTAGCCTGCTGGGCCTGGGCCGGCAGCGt                                                                                                                          <  1:46658/150‑1 (MQ=255)
                   gCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGt                                                                                                                          <  1:1130969/150‑1 (MQ=255)
                     aGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGa                                                                                                                        >  1:2236570/1‑150 (MQ=255)
                      gTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTATGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGAt                                                                                                                       >  1:274263/1‑150 (MQ=255)
                      gTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATATCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGAt                                                                                                                       >  1:617270/1‑150 (MQ=255)
                           tGAACCCCAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGcc                                                                                                                  >  2:1066025/1‑150 (MQ=255)
                            gAACCCCAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCa                                                                                                                 <  2:215780/150‑1 (MQ=255)
                             aaCCCCAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGctgggc                                                                                                                                         >  2:587120/1‑125 (MQ=255)
                             aaCCCCAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGctgggc                                                                                                                                         <  1:587120/125‑1 (MQ=255)
                                cccAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTAc                                                                                                             <  2:587153/150‑1 (MQ=255)
                                cccAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTAc                                                                                                             >  2:1830328/1‑150 (MQ=255)
                                cccAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTAc                                                                                                             >  1:1728499/1‑150 (MQ=255)
                                cccAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGAGCCTGGGCCGGCAGCGTGATTCGCCAGTAc                                                                                                             >  2:621887/1‑150 (MQ=255)
                                cccAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCCGGCCCAGGCCCAgcaggctaccgagatgaaac                                                                                                             >  1:1960933‑M2/1‑130 (MQ=255)
                                 ccAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACGGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTAcc                                                                                                            <  1:2191225/150‑1 (MQ=255)
                                  cAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCt                                                                                                           >  1:155534/1‑150 (MQ=255)
                                  cAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCt                                                                                                           <  1:1788313/150‑1 (MQ=255)
                                     aGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGa                                                                                                        <  1:1806129/150‑1 (MQ=255)
                                       ccTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCGTCTGGGGATCCGTCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACa                                                                                                      >  2:1881806/1‑150 (MQ=255)
                                        cTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACaa                                                                                                     >  1:2211344/1‑150 (MQ=255)
                                            ttGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCa                                                                                                 <  2:484210/150‑1 (MQ=255)
                                             tGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCAc                                                                                                <  1:453651/150‑1 (MQ=255)
                                                 aGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGg                                                                                                                                >  1:989417‑M2/1‑113 (MQ=255)
                                                 aGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGg                                                                                                                                <  2:989417‑M2/114‑2 (MQ=255)
                                                 aGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCa                                                                                            >  1:1007492/1‑150 (MQ=255)
                                                  gCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCAc                                                                                           <  2:155534/150‑1 (MQ=255)
                                                   ccGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCcggcccaggcccagcagg                                                                                                                            >  1:3385‑M1/1‑98 (MQ=255)
                                                   ccGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCcggcccaggcccagcagg                                                                                                                            <  2:3385‑M1/116‑19 (MQ=255)
                                                    cGTTGCCGAGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGc                                                                                              <  2:1329196/145‑1 (MQ=255)
                                                    cGTTGCCGAGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGc                                                                                              >  1:1329196/1‑145 (MQ=255)
                                                        gCCGTGGTGGGTGCCTACACCGGCGGTGAACAGAACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTgcgc                                                                                     >  1:2410734/1‑150 (MQ=255)
                                                                 ggtgCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTATGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAAt                                                                            <  2:274263/150‑1 (MQ=255)
                                                                 ggtgCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAAt                                                                            >  1:1958624/1‑150 (MQ=255)
                                                                   tgCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCg                                                                          >  2:404486/1‑150 (MQ=255)
                                                                       tACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTTCTCTCGGTAGCCTGCCGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGc                                                                      <  2:835168/150‑1 (MQ=255)
                                                                           ccGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCg                                                                          >  2:1552316/1‑142 (MQ=255)
                                                                           ccGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCg                                                                          <  1:1552316/142‑1 (MQ=255)
                                                                                 gTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCgtgt                                                            >  1:1370778/1‑150 (MQ=255)
                                                                                   gAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCAc                                                                                                <  1:27322/112‑1 (MQ=255)
                                                                                   gAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCAc                                                                                                >  2:27322/1‑112 (MQ=255)
                                                                                     aCAGCACTTGCTGTGGCTGTTTACCTGGNTCTACGGGCCGATCTN‑TNTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCCTGCTCAATCGGAGCCTGGCCGTGTNACt                                                        >  1:1558209/1‑150 (MQ=255)
                                                                                     aCAGCACTTGCTGTGGCTGTTTACCTGGATCTAAGAGCCGAGCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACt                                                        <  2:2410734/150‑1 (MQ=255)
                                                                                       aGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTgg                                                      >  1:1913921/1‑150 (MQ=255)
                                                                                         cACTTGGTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTc                                                    <  2:1016236/150‑1 (MQ=255)
                                                                                         cACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGGTTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTc                                                    <  2:1651123/150‑1 (MQ=255)
                                                                                          aCTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCCGGCCCAGGCCCAgcaggctaccgagatgaaacagatc                                                                                                        >  1:1000720‑M2/1‑72 (MQ=255)
                                                                                          aCTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCCGGCCCAGGCCCAgcaggctaccgagatgaaacagatc                                                                                                        <  2:1446687‑M2/97‑26 (MQ=255)
                                                                                          aCTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCCGGCCCAGGCCCAgcaggctaccgagatgaaacagatc                                                                                                        <  2:1446588‑M2/97‑26 (MQ=255)
                                                                                          aCTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCCGGCCCAGGCCCAgcaggctaccgagatgaaacagatc                                                                                                        <  2:1000720‑M2/97‑26 (MQ=255)
                                                                                          aCTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCCGGCCCAGGCCCAgcaggctaccgagatgaaacagatc                                                                                                        >  1:1446687‑M2/1‑72 (MQ=255)
                                                                                              gCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAg                                               >  1:102473/1‑150 (MQ=255)
                                                                                               cTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAg                                                                                                                >  1:569287/1‑84 (MQ=255)
                                                                                               cTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAg                                                                                                                <  2:569287/84‑1 (MQ=255)
                                                                                                   ggCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCgg                                          <  2:2015087/150‑1 (MQ=255)
                                                                                                      tGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTg                                                                                                          <  1:1583173/83‑1 (MQ=255)
                                                                                                      tGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTg                                                                                                          >  2:1583173/1‑83 (MQ=255)
                                                                                                         ttACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTAcc                                    <  1:1403168/150‑1 (MQ=255)
                                                                                                             cTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCCCCTCCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGAt                                >  2:2157639/1‑150 (MQ=255)
                                                                                                             cTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCg                                                   <  1:149028/131‑1 (MQ=255)
                                                                                                             cTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGAt                                >  1:2205095/1‑150 (MQ=255)
                                                                                                                   caaCGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCCCGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTa                          <  2:2380483/148‑1 (MQ=255)
                                                                                                                     aCGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTAAg                        <  2:1007492/150‑1 (MQ=255)
                                                                                                                         gCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTAAGGCtt                    <  2:1544049/150‑1 (MQ=255)
                                                                                                                            gATCTG‑TTTCATCTCGGTAGCCTGCtgggcctgggccggcaggctaccgagatgaaacagatcggcccgtagatccaggtaaacagccacagcaagt                                                                      >  1:1446687‑M1/1‑25 (MQ=255)
                                                                                                                            gATCTG‑TTTCATCTCGGTAGCCTGCtgggcctgggccggcaggctaccgagatgaaacagatcggcccgtagatccaggtaaacagccacagcaagt                                                                      >  1:1446588‑M1/1‑25 (MQ=255)
                                                                                                                            gATCTG‑TTTCATCTCGGTAGCCTGCtgggcctgggccggcaggctaccgagatgaaacagatcggcccgtagatccaggtaaacagccacagcaagt                                                                      <  2:1446687‑M1/97‑73 (MQ=255)
                                                                                                                            gATCTG‑TTTCATCTCGGTAGCCTGCtgggcctgggccggcaggctaccgagatgaaacagatcggcccgtagatccaggtaaacagccacagcaagt                                                                      >  1:1000720‑M1/1‑25 (MQ=255)
                                                                                                                            gATCTG‑TTTCATCTCGGTAGCCTGCtgggcctgggccggcaggctaccgagatgaaacagatcggcccgtagatccaggtaaacagccacagcaagt                                                                      <  2:1446588‑M1/97‑73 (MQ=255)
                                                                                                                            gATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTAAg                        >  1:994003/1‑143 (MQ=255)
                                                                                                                              tCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTc                                                    >  2:112366/1‑113 (MQ=255)
                                                                                                                              tCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTAAGGCTTGCACg               >  1:1810936/1‑150 (MQ=255)
                                                                                                                                tG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTAAGGCTTGCACGGc             >  1:1501928/1‑150 (MQ=255)
                                                                                                                                 g‑TTTCATCTCGGTAGCCTGCtgggcctgggccggcaggctaccgagatgaaacagatcggcccgtagatccaggtaaacagccacagcaagtgctgttcaccgccggtgtaggcacccaccccggcaacggctgccaaccaggctttggg            >  1:1960933‑M1/1‑20 (MQ=255)
                                                                                                                                   tttCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTaa                         >  2:960026/1‑136 (MQ=255)
                                                                                                                                   tttCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTaa                         <  1:960026/136‑1 (MQ=255)
                                                                                                                                   tttCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTAAGGCTTGCACGGCTc           <  2:1868400/150‑1 (MQ=255)
                                                                                                                                   tttCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTAAGGCTTGCACGGCTc           >  2:836059/1‑150 (MQ=255)
                                                                                                                                     tCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTAAGGCTTGCACGGCTCCt         <  2:1810936/150‑1 (MQ=255)
                                                                                                                                        tctcGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTAAGGCTTg                   <  1:72224/137‑1 (MQ=255)
                                                                                                                                        tctcGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTAAGGCTTGCACGGCTCCTGCa      >  2:697005/1‑150 (MQ=255)
                                                                                                                                        tctcGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTAAGGCTTGCACGGCTCCTGCa      >  1:1648849/1‑150 (MQ=255)
                                                                                                                                        tctcGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCGTTAAGGCTTGCACGGCTCCTGCa      <  1:1066025/150‑1 (MQ=255)
                                                                                                                                            ggTAGCCTGCCGGGCCTGGGCCGGCAGGGTGATTCGGCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTAAGGCTTGCACGGCTCCTGCAGGAg  <  2:2211344/150‑1 (MQ=255)
                                                                                                                                             gTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGAt                                <  1:2021300/119‑1 (MQ=255)
                                                                                                                                             gTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGAt                                >  2:2021300/1‑119 (MQ=255)
                                                                                                                                                 ccTGCTGGGCCTGGGCCGgcaggctaccgagatgaaacagatcggcccgtagatccaggtaaacagccacagcaagtgctgttcaccgccggtgtaggcacccaccccggcaacgg                               <  2:3385‑M2/116‑99 (MQ=255)
                                                                                                                                                 ccTGCTGGGCCTGGGCCGgcaggctaccgagatgaaacagatcggcccgtagatccaggtaaacagccacagcaagtgctgttcaccgccggtgtaggcacccaccccggcaacgg                               >  1:3385‑M2/1‑18 (MQ=255)
                                                                                                                                                 ccTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTa                          >  2:368166/1‑121 (MQ=255)
                                                                                                                                                 ccTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTa                          <  1:368166/121‑1 (MQ=255)
                                                                                                                                                   tgctgGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCgt                                                              <  1:1978776/83‑1 (MQ=255)
                                                                                                                                                     ccggcccaggcccagcaggctaccgagatgaaacagatcggcccgtagatccaggtaaacagccacagcaagtgctgttcaccgccggtgtaggcacccaccccggcaacggct                             <  2:989417‑M1/114‑114 (MQ=255)
                                                                                                                                                     ccggcccaggcccagcaggctaccgagatgaaacagatcggcccgtagatccaggtaaacagccacagcaagtgctgttcaccgccggtgtaggcacccaccccggcaacggct                             >  1:989417‑M1/1‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                            
CCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGTTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTG‑TTTCATCTCGGTAGCCTGCTGGGCCTGGGCCGGCAGCGTGATTCGCCAGTACCTGGACAACCCACGCCACCTGCGCATGCTCAATCGGAGCCTGGCCGTGTTACTGGTCGCCAGCGCGGTTTACCTGATCCTTTAAGGCTTGCACGGCTCCTGCAGGAG  >  NC_002947/3895710‑3895998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.