New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 394798413 (0.140)4 (0.060) 4/194 NT 19.0% coding (109/1797 nt) PP_3483 type II secretion system protein
?NC_002947 = 3948013 24 (0.330)coding (80/1797 nt) PP_3483 type II secretion system protein

AGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGC  >  NC_002947/3947840‑3948130
                                                                                                                                                |                                                                                                                                                  
aGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACAt                                                                                                                                               <  1:2097654/150‑1 (MQ=255)
  gtgtCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTAGTCAGTGGCTTGCAGACGGGCCTGCGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATca                                                                                                                                             >  1:290417/1‑150 (MQ=255)
     tCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCCGTTGAGCGGTCGCGCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAg                                                                                                                                          <  2:1774404/150‑1 (MQ=255)
           gtgtCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCtgt                                                                                                                                    <  1:725393/150‑1 (MQ=255)
           gtgtCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCtgt                                                                                                                                    <  2:2036313/150‑1 (MQ=255)
            tgtCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCtgtg                                                                                                                                   <  1:247537/150‑1 (MQ=255)
                gCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCt                                                                                                                               >  2:2362905/1‑150 (MQ=255)
                gCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGG                                                                                                                                                    <  2:921977‑M1/129‑1 (MQ=255)
                gCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGG                                                                                                                                                    >  1:921977‑M1/1‑129 (MQ=255)
                  aggccaggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACAt                                                                                                                                               <  2:635225/132‑1 (MQ=255)
                  aggccaggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACAt                                                                                                                                               >  1:635225/1‑132 (MQ=255)
                   ggccaggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCa                                                                                                                            <  2:1119604/150‑1 (MQ=255)
                   ggccaggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCa                                                                                                                            <  2:1006923/150‑1 (MQ=255)
                      caggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCa                                                                                                                            >  1:2284225/1‑147 (MQ=255)
                      caggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCa                                                                                                                            <  2:2284225/147‑1 (MQ=255)
                            ttCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctg                                                                                                                   >  2:682022‑M1/1‑117 (MQ=255)
                             ccagcctgcgacgcgcccctgagcggcgtcgaaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCtgt                                                                                                                  >  2:2016155‑M1/89‑150 (MQ=255)
                               agcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTgg                                                                                                                >  2:1478937‑M1/87‑150 (MQ=255)
                                 ggCAGTCGAGGGGGGGCTCGTCAGGGGCTTGCAGACGGGCCTGGGCCAGGAGGGCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCGCAGGatgtatgcagcccacagacctgtgatgtacctgtggga                                                                                                              <  2:208116‑M1/150‑39 (MQ=255)
                                 ggCAGTCCAGCGGGCGCTCGTCAGTGGCTTGCAGACCGGCCTGGGCCAGGAGGTCGCGGGTGTAGGCGGAAATTTTTGCTGGGTTCTGCGCGGCCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGTCTGCATACATcctgtggga                                                                                                              >  1:320247‑M2/1‑141 (MQ=255)
                                 cctgcgacgcgcccctgagcggagtcgtaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGa                                                                                                              >  2:1267944‑M1/85‑150 (MQ=255)
                                    gcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCg                                                                                                           >  2:1779382‑M1/82‑150 (MQ=255)
                                    aGTCGAGGAGGCGCTCGTCAGGGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcg                                                                                                           >  2:1346185‑M2/1‑138 (MQ=255)
                                    aGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcg                                                                                                           <  2:1803810‑M1/150‑42 (MQ=255)
                                     gTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATTTATcctgggggagcgg                                                                                                          >  2:2434320‑M2/1‑137 (MQ=255)
                                     gTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgg                                                                                                          <  1:2383877‑M2/150‑14 (MQ=255)
                                     gTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgg                                                                                                          >  2:2383877‑M2/1‑137 (MQ=255)
                                       acgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGc                                                                                                        >  1:2399816‑M1/79‑150 (MQ=255)
                                         aGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcat                                                                                                      <  1:682022‑M1/150‑47 (MQ=255)
                                         aGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcat                                                                                                      >  1:1829589‑M2/1‑133 (MQ=255)
                                             ggCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgccc                                                                                                  >  1:2362905‑M2/1‑129 (MQ=255)
                                                        gTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATcaca                                                                                                                                           <  2:2027773/98‑1 (MQ=255)
                                                        gTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATcaca                                                                                                                                           >  1:2027773/1‑98 (MQ=255)
                                                             ttGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgctcc                                                                                             <  2:2147273‑M2/139‑27 (MQ=255)
                                                             ttGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgctcc                                                                                             >  1:2147273‑M2/1‑113 (MQ=255)
                                                                   aCGGGCCTGGGCCAGGAGGTCGCTGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgc                                                                                                >  1:345023‑M2/1‑107 (MQ=255)
                                                                   aCGGGCCTGGGCCAGGAGGTCGCTGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgc                                                                                                <  2:345023‑M2/130‑24 (MQ=255)
                                                                       agaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTgg                                                                                                                <  1:1746445‑M1/64‑1 (MQ=255)
                                                                       agaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTgg                                                                                                                >  2:1746445‑M1/47‑110 (MQ=255)
                                                                                aggaggTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGGATGCCCGCTCCCACAGGTACAGCACAGGTCTGTGGGCTGCATACATCCTGTGCGAGCGGGCATGCCCGCGAGGACGTCGTTGCAGGCTGTGCGGTGTCCggg                                                               >  2:1229074/1‑150 (MQ=38)
                                                                                                                 gggTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgt                                                                                                                  <  2:1512650‑M2/66‑6 (MQ=255)
                                                                                                                 gggTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgt                                                                                                                  >  1:1512650‑M2/1‑61 (MQ=255)
                                                                                                                       ggagcgggcATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaa                                   >  1:2147273‑M1/4‑26 (MQ=255)
                                                                                                                       ggagcgggcATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaa                                   <  2:2147273‑M1/136‑114 (MQ=255)
                                                                                                                        gaGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAACGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTc                       <  2:1327122‑M1/148‑1 (MQ=255)
                                                                                                                          gcgGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctaccccagcgacctcctggcccaggcccgt                                         <  2:345023‑M1/130‑108 (MQ=255)
                                                                                                                          gcgGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctaccccagcgacctcctggcccaggcccgt                                         >  1:345023‑M1/1‑23 (MQ=255)
                                                                                                                            gggCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcc                   >  1:2362905‑M1/1‑21 (MQ=255)
                                                                                                                            GGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGAGCATACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAggg                   <  1:757565‑M1/150‑1 (MQ=255)
                                                                                                                                aTGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgct               >  1:1829589‑M1/1‑17 (MQ=255)
                                                                                                                                aTGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgct               <  1:682022‑M2/150‑105 (MQ=255)
                                                                                                                                ATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGACTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGgcgc               <  2:1275468‑M1/150‑1 (MQ=255)
                                                                                                                                   CCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGACATGGCCTGCGACTCCGCTCAGGGGCGCGTc            <  2:697272‑M1/150‑1 (MQ=255)
                                                                                                                                    ccGCTCCCCCAGGataaatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgac           >  2:2434320‑M1/1‑13 (MQ=255)
                                                                                                                                    ccGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgac           <  1:2383877‑M1/150‑138 (MQ=255)
                                                                                                                                    ccGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgac           >  2:2383877‑M1/1‑13 (MQ=255)
                                                                                                                                    CCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCTAATGCTTCTGGCATGGCCTGCGACTCCGCTCaggggcgcccgc           <  2:2394354‑M1/150‑5 (MQ=255)
                                                                                                                                     cGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagcccctgacgagcgcctcctcgact          >  2:1346185‑M1/1‑12 (MQ=255)
                                                                                                                                     cGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgact          <  2:1803810‑M2/150‑110 (MQ=255)
                                                                                                                                        tCCCACAGGatgtatgcagaccacagacctgtgatgtacctgtgggagcgggcatggccgcgcagaacccagcaaaaatttccgcctacacccgcgacctcctggcccaggccggtctgcaagccactgacgagcgcccgctggactgcc       >  1:320247‑M1/1‑9 (MQ=255)
                                                                                                                                        tCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgcgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgccctcctggcccaggcccgtctgcaagcccctgacgagccccccctcgactgcc       <  2:208116‑M2/150‑113 (MQ=255)
                                                                                                                                        TCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCcgc                                                                                                <  1:866168‑M1/61‑1 (MQ=255)
                                                                                                                                        TCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCcgc                                                                                                >  2:866168‑M1/1‑61 (MQ=255)
                                                                                                                                        TCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAgg       <  1:1805768‑M1/150‑1 (MQ=255)
                                                                                                                                            acaGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaaccc                                                                                       >  1:1512650‑M1/1‑5 (MQ=255)
                                                                                                                                            acaGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaaccc                                                                                       <  2:1512650‑M1/66‑62 (MQ=255)
                                                                                                                                            ACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGTAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggctgg   <  1:1099836‑M1/150‑1 (MQ=255)
                                                                                                                                            ACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATACTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGcgtcgcacccctg   <  1:521850‑M1/150‑7 (MQ=255)
                                                                                                                                             caGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctggaa  >  2:682022‑M2/1‑33 (MQ=255)
                                                                                                                                             CAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggctggc  >  1:1327122‑M1/1‑150 (MQ=255)
                                                                                                                                                GTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAAt                                                   <  2:1166504‑M1/98‑1 (MQ=255)
                                                                                                                                                GTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAAt                                                   >  1:1166504‑M1/1‑98 (MQ=255)
                                                                                                                                                |                                                                                                                                                  
AGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGC  >  NC_002947/3947840‑3948130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.