New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 436532989 (0.950)5 (0.060) 5/236 NT 6.0% coding (74/1098 nt) PP_3842 hypothetical protein
?NC_002947 = 4365352 73 (0.830)coding (97/1098 nt) PP_3842 hypothetical protein

Only 100 of 123 total aligned reads displayed.

GTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGAGTATATCCATGCCGTTGAAGGCGATATCAGCCAGGAGGGGCTTGGCCTCAGCGAAGCAGACA  >  NC_002947/4365184‑4365478
                                                                                                                                                 |                                                                                                                                                     
     aaaTCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACaa                                                                                                                                              <  2:2064310/150‑1 (MQ=255)
      aaNCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAg                                                                                                                                             >  1:1556106/1‑150 (MQ=255)
       aTCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGa                                                                                                                                            <  1:2347660/150‑1 (MQ=255)
        tCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGAc                                                                                                                                           <  2:890389/150‑1 (MQ=255)
         ccTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGAcc                                                                                                                                          <  2:1043164/150‑1 (MQ=255)
          cTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCt                                                                                                                                         >  2:1746940/1‑150 (MQ=255)
           ttGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCTAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAgg                                                                                                                                                    <  2:1324249/138‑1 (MQ=255)
           ttGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTg                                                                                                                                        >  2:2033823/1‑150 (MQ=255)
           ttGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTg                                                                                                                                        >  1:2051089/1‑150 (MQ=255)
           ttGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGAGCGAGTGCAGAAGACCTg                                                                                                                                        >  2:1320793/1‑150 (MQ=255)
           tcgACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGGGCTTTGTCACCGGCGGCAGCGGCTTGGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTg                                                                                                                                        >  2:1032911/3‑150 (MQ=255)
            tGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTgg                                                                                                                                       <  2:1556106/150‑1 (MQ=255)
            tGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTgg                                                                                                                                       <  1:1453649/150‑1 (MQ=255)
            tGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTgg                                                                                                                                       <  2:772814/150‑1 (MQ=255)
             gACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTggg                                                                                                                                      <  2:2051089/150‑1 (MQ=255)
              aCTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGt                                                                                                                                     <  1:1816508/150‑1 (MQ=255)
                    gagCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCCTTGGTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGAt                                                                                                                               >  1:2275067‑M2/1‑149 (MQ=255)
                    gagCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGAt                                                                                                                               >  1:253364‑M2/1‑149 (MQ=255)
                             ctACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGccc                                                                                                                      <  2:1478655/150‑1 (MQ=255)
                               acacCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGTGCACAAGACCTGGGTGCTGATGCGCAGCCCCg                                                                                                                    <  1:564056/150‑1 (MQ=255)
                               acacCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCg                                                                                                                    <  1:1412653/150‑1 (MQ=255)
                                  ccTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCGATATTGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTa                                                                                                                 >  1:1484336/1‑150 (MQ=255)
                                     tAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACa                                                                                                              >  1:1556805/1‑150 (MQ=255)
                                       gCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATc                                                                                                            >  1:911853/1‑150 (MQ=255)
                                          tGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGaa                                                                                                         <  2:1805904/150‑1 (MQ=255)
                                             gcCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGc                                                                                                      >  1:1936642/1‑150 (MQ=255)
                                             gcCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGc                                                                                                      <  2:617672/150‑1 (MQ=255)
                                              cccATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGAtgcgca                                                                                                                          <  1:961664‑M2/129‑7 (MQ=255)
                                              cccATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGAtgcgca                                                                                                                          >  2:961664‑M2/1‑123 (MQ=255)
                                              cccATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCg                                                                                                           >  1:982643/1‑144 (MQ=255)
                                                 atcatTCAAACAAGGGTTCAGACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAGGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCa                                                                                                  >  1:811969/1‑150 (MQ=255)
                                                 atcatTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACAt                                                                                                             <  2:583116/139‑1 (MQ=255)
                                                 atcatTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACAt                                                                                                             >  1:583116/1‑139 (MQ=255)
                                                  tcatTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCaa                                                                                                 <  2:788076/150‑1 (MQ=255)
                                                   catTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAtcagcacccaggtcttgtgcccttgcgc                                                                                                                           <  2:2118497‑M1/123‑29 (MQ=255)
                                                   catTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAtcagcacccaggtcttgtgcccttgcgc                                                                                                                           >  1:2118497‑M1/1‑95 (MQ=255)
                                                   catTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAg                                                                                                <  1:171630/150‑1 (MQ=255)
                                                    atTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCAGGAACTTTGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAATACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAgg                                                                                               >  1:1241552/1‑150 (MQ=255)
                                                     ttCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACaa                                                                                                                                              <  2:1169671/102‑1 (MQ=255)
                                                     ttCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGa                                                                                              >  1:1931019/1‑150 (MQ=255)
                                                       cAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGc                                                                                            <  2:1931019/150‑1 (MQ=255)
                                                        aaaCAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGNGCa                                                                                           <  2:1510258/150‑1 (MQ=255)
                                                        aaaCAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCa                                                                                           <  2:883228/150‑1 (MQ=255)
                                                         aaCAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAg                                                                                          <  1:504876/150‑1 (MQ=255)
                                                           cAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGt                                                                                        <  2:2195298/150‑1 (MQ=255)
                                                            aaGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTa                                                                                       >  1:1718359/1‑150 (MQ=255)
                                                            aaGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTa                                                                                       >  1:778674/1‑150 (MQ=255)
                                                            aaGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTa                                                                                       >  2:590748/1‑150 (MQ=255)
                                                             aGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAg                                                                                      <  2:2010789/150‑1 (MQ=255)
                                                                gTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGcc                                                                                   >  2:2268234/1‑150 (MQ=255)
                                                                 ttCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCCACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCa                                                                                  >  2:2432122/1‑150 (MQ=255)
                                                                     aaCATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCa                                                                                           <  2:1872248/137‑1 (MQ=255)
                                                                     aaCATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCa                                                                                           >  1:1872248/1‑137 (MQ=255)
                                                                      aCATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTgg                                                                             >  2:156982/1‑150 (MQ=255)
                                                                      aCATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCGTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTgg                                                                             <  2:750611/150‑1 (MQ=255)
                                                                       cATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTggg                                                                            <  2:778674/150‑1 (MQ=255)
                                                                       cATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTggg                                                                            <  1:590748/150‑1 (MQ=255)
                                                                       cATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTCTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTggg                                                                            <  2:1484336/150‑1 (MQ=255)
                                                                         tGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTggggg                                                                          <  2:362935/150‑1 (MQ=255)
                                                                         tGAGTCTGGAGTGCTTTGCCGCCCCCTCCATCCTTTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTggggg                                                                          <  1:1108233/150‑1 (MQ=255)
                                                                             tgtgGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTaa                                                                      >  2:241707/1‑150 (MQ=255)
                                                                               tgGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCt                                                                                                                                         >  2:102301/1‑81 (MQ=255)
                                                                               tgGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCt                                                                                                                                         <  1:102301/81‑1 (MQ=255)
                                                                               tgGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCt                                                                                                                                  <  2:1120579/88‑1 (MQ=255)
                                                                               tgGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCt                                                                                                                                  >  1:1120579/1‑88 (MQ=255)
                                                                                   gTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAGGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGa                                                                <  2:811969/150‑1 (MQ=255)
                                                                                   gTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGa                                                                <  1:241707/150‑1 (MQ=255)
                                                                                      cTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGc                                                                                            >  2:1231292/1‑119 (MQ=255)
                                                                                      cTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGc                                                                                            <  1:1231292/119‑1 (MQ=255)
                                                                                       tttGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCt                                                                                                    <  1:1055826/110‑1 (MQ=255)
                                                                                       tttGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCt                                                                                                    >  2:1055826/1‑110 (MQ=255)
                                                                                              ccGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGAGTATATCCATg                                                     >  1:1906864/1‑150 (MQ=255)
                                                                                                     cAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGAGTATATCCATGCCGTTGa                                              >  1:1319728/1‑150 (MQ=255)
                                                                                                      aGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGAg                                                               <  1:1628589/132‑1 (MQ=255)
                                                                                                         ggtgttGTGGTGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGAGTATATCCATGCCGTTGAAGGc                                          <  1:2334391/146‑1 (MQ=255)
                                                                                                           cTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGAGTATATCCATGCCGTTGAAGGCGa                                        >  1:1704334/1‑150 (MQ=255)
                                                                                                             ttGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGAGTATATCCATGCCGTTGAAGGCGata                                      <  1:115923/150‑1 (MQ=255)
                                                                                                                  gggCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGAtgc                                                                                                                             <  1:75427‑M2/58‑4 (MQ=255)
                                                                                                                        cATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGAGTATATCCATGCCGtt                                                >  1:2154995/1‑129 (MQ=255)
                                                                                                                        cATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGAGTATATCCATGCCGtt                                                <  2:2154995/129‑1 (MQ=255)
                                                                                                                                      tCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGAGTATATCCATGCCGTTGAAGGCGATATCAGCCAGGAGGGGCTTGGCCTCAg             <  1:1320793/150‑1 (MQ=255)
                                                                                                                                       cTTNCTGCGCAAGGGCACAAGACCTGGGTGCTGAtgcgcagtaagaccggccagcaaatgttgccccacaaagccgctgccgccggtgacaaagcactccacactcatgtttgaacccttgtttgaatgatgggcgcaggctaaggtgta            <  2:1505359‑M2/150‑117 (MQ=255)
                                                                                                                                          aCTGCGCAAGGGCACAAGACCTGGGTGCTGAtgcgcagtaagaccggccagcaaatgttgccccacaaagccgctgccgccggtgacaaa                                                                     >  1:240280‑M2/1‑31 (MQ=255)
                                                                                                                                          aCTGCGCAAGGGCACAAGACCTGGGTGCTGAtgcgcagtaagaccggccagcaaatgttgccccacaaagccgctgccgccggtgacaaa                                                                     <  2:240280‑M2/90‑60 (MQ=255)
                                                                                                                                          aCTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGAGTATATCCATGCCGTTGAAGGCGATATCAGCCAGGAGGGGCTTGGCCTCAGCGaa         <  1:1746940/150‑1 (MQ=255)
                                                                                                                                           cTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGAGTATATCCATGCCGTTGAAGGCGATATCAGCCa                               >  2:1383543/1‑127 (MQ=255)
                                                                                                                                           cTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGAGTATATCCATGCCGTTGAAGGCGATATCAGCCa                               <  1:1383543/127‑1 (MQ=255)
                                                                                                                                            tGCGCAtcagcacccaggtcttgtgcccttgcgcagtaagaccggccagcaaatgttgccccacaaagccgctgccgccggtgacaaagcactccacactcatgtttgaacccttgtttgaatgatggg                            <  1:961664‑M1/129‑124 (MQ=255)
                                                                                                                                            tGCGCAtcagcacccaggtcttgtgcccttgcgcagtaagaccggccagcaaatgttgccccacaaagccgctgccgccggtgacaaagcactccacactcatgtttgaacccttgtttgaatgatggg                            >  2:961664‑M1/1‑6 (MQ=255)
                                                                                                                                            tGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGAGTATATCCATGCCGTTGAAGGCGATATCAGCCAGGAGGGGCTTGGCCTCAGCGAAGc       >  2:2397668/1‑150 (MQ=255)
                                                                                                                                             gcgcAtcagcacccaggtcttgtgcccttgcgcagtaagaccggccagcaaatgttgccccacaaagccgctgccgccggtgacaaagcactccacactcatgtttgaacccttgtttgaatgatgggcgcaggctaaggtgtagagcct      <  1:1478655‑M1/150‑146 (MQ=255)
                                                                                                                                             gcgcAAGGGCACAAGACCTGGGTGCTGAtgcgcagtaagaccggccagcaaatgttgccccacaaagccgctgccgccggtgacaaagcactccacactcatgtttgaacccttgtttgaatg                                 >  1:2118497‑M2/1‑28 (MQ=255)
                                                                                                                                              cgcAtcagcacccaggtcttgtgcccttgcgcagtaagaccggccagcaaatgttgccccacaaagccgctgccgccggtgacaaagcactccacactcatgtttgaacccttgtttgaatgatgggcgcaggctaaggtgtagagcctg     <  1:362935‑M1/150‑147 (MQ=255)
                                                                                                                                              cgcAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAgg                                                                                         <  2:1388746/66‑1 (MQ=255)
                                                                                                                                              cgcAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAgg                                                                                         >  1:1388746/1‑66 (MQ=255)
                                                                                                                                               gcAtcagcacccaggtcttgtgcccttgcgcagtaagaccggccagcaaatgttgccc                                                                                                >  2:75427‑M1/1‑3 (MQ=255)
                                                                                                                                                 atcagcacccaggtcttgtgcccttgcgcagtaagaccggccagcaaccaaggccccacaaagccgctgccgccggtgacaaagcactccacactcatgtttgaacccttgtttgaatgatgggcgcaggctaaggtgtagagcctgctc  >  1:2275067‑M1/1‑1 (MQ=255)
                                                                                                                                                 atcagcacccaggtcttgtgcccttgcgcagtaagaccggccagcaaatgttgccccacaaagccgctgccgccggtgacaaagcactccacactcatgtttgaacccttgtttgaatgatgggcgcaggctaaggtgtagagcctgctc  >  1:253364‑M1/1‑1 (MQ=255)
                                                                                                                                                 aaGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGAGTATATCCATGCCGTTGAAGGCGATATCAg                                  <  1:868021/118‑1 (MQ=255)
                                                                                                                                                 aaGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGAGTATATCCATGCCGTTGAAGGCGATATCAGCCAGGAGGGGCTTGGCCTCAGCGAAGCAGACa  >  2:1427170/1‑150 (MQ=255)
                                                                                                                                                 |                                                                                                                                                     
GTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCAAGGGCACAAGACCTGGGTGCTGATGCGCAGCCCCGGTAACATCGAACGCCTCAAGGAGCAGGTAGGCCAACTGGGGGGTAACCCTGAGTATATCCATGCCGTTGAAGGCGATATCAGCCAGGAGGGGCTTGGCCTCAGCGAAGCAGACA  >  NC_002947/4365184‑4365478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.