New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 519039466 (0.710)6 (0.070) 6/230 NT 8.2% intergenic (‑81/+93) PP_4570/cysK hypothetical protein/cysteine synthase A
?NC_002947 = 5190411 74 (0.860)intergenic (‑98/+76) PP_4570/cysK hypothetical protein/cysteine synthase A

ACGAACAGCACGCTGCCGAAAAACACCAGCAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCTGCTCGCTGAACATGTCGCTGAACAGCATGCTCGACAAGTA  >  NC_002947/5190249‑5190543
                                                                                                                                                 |                                                                                                                                                     
aCGAACAGCACGCTGCCGAAAAACACCAGCAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCgg                                                                                                                                                   <  1:1366476/150‑1 (MQ=255)
           gCTGCCGAAAAACACCAGCAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAAcc                                                                                                                                        >  1:1377859/1‑150 (MQ=255)
            cTGCCGAAAAACACCAGCAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAAccc                                                                                                                                       <  2:926243/150‑1 (MQ=255)
                  aaaaaCACCAGCAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTTCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGggcgg                                                                                                                                 <  1:2200257‑M2/150‑6 (MQ=255)
                  aaaaaCACCAGCAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGggcgg                                                                                                                                 >  2:715376‑M2/1‑145 (MQ=255)
                    aaaCACCAGCAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGggcggga                                                                                                                               <  1:2390048‑M2/150‑8 (MQ=255)
                      acacCAGCAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGggcgggatc                                                                                                                             >  2:2390048‑M2/1‑141 (MQ=255)
                       cacCAGCAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGggcgggatcg                                                                                                                            <  1:874731‑M2/150‑11 (MQ=255)
                             cAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCcgggttgtttttaccgcggcggg                                                                                                                                >  2:462965‑M1/1‑117 (MQ=255)
                             cAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCcgggttgtttttaccgcggcggg                                                                                                                                <  1:462965‑M1/140‑24 (MQ=255)
                               aGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCACCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATg                                                                                                                    <  2:210361/150‑1 (MQ=255)
                                 acacCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGaa                                                                                                                  >  1:1143496/1‑150 (MQ=255)
                                    cccGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGggcggga                                                                                                                               <  2:2315526‑M2/134‑8 (MQ=255)
                                    cccGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGggcggga                                                                                                                               >  1:2315526‑M2/1‑127 (MQ=255)
                                     ccGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGAtt                                                                                                              >  2:871380/1‑150 (MQ=255)
                                        ccTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTg                                                                                                           >  1:1704165/1‑150 (MQ=255)
                                         cTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGc                                                                                                          >  2:1218216/1‑150 (MQ=255)
                                          ttGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCa                                                                                                         >  1:1345269/1‑150 (MQ=255)
                                            ggCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAAt                                                                                                       >  1:1623146/1‑150 (MQ=255)
                                             gCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCaa                                                                                                        >  1:1410261/1‑148 (MQ=255)
                                             gCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCAGGCGGGATCGCATTCATGAAGATTTTGCaa                                                                                                        <  2:1410261/148‑1 (MQ=255)
                                               tGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATaaa                                                                                                    <  1:965031/150‑1 (MQ=255)
                                                gCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAAc                                                                                                   <  2:1345269/150‑1 (MQ=255)
                                                  aaaGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCa                                                                                                 <  2:1140587/150‑1 (MQ=255)
                                                      gAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTcc                                                                                             >  1:2144844/1‑150 (MQ=255)
                                                        aaaGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCa                                                                                                                      <  2:1661499/123‑1 (MQ=255)
                                                        aaaGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCa                                                                                                                      >  1:1661499/1‑123 (MQ=255)
                                                             tCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATc                                                                                      <  2:2381313/150‑1 (MQ=255)
                                                             tCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATc                                                                                      <  2:2384499/150‑1 (MQ=255)
                                                              cATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGAtttt                                                                                                            <  1:2405050/127‑1 (MQ=255)
                                                              cATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGAtttt                                                                                                            >  2:2405050/1‑127 (MQ=255)
                                                                  cTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTgc                                                                                 <  1:7742/150‑1 (MQ=255)
                                                                        cTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATa                                                                                                      <  2:640503/123‑1 (MQ=255)
                                                                        cTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATa                                                                                                      >  1:640503/1‑123 (MQ=255)
                                                                           cTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCa                                                                        >  2:612380/1‑150 (MQ=255)
                                                                            ttGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAATGTCCGTCGTGCGAGGTCGCAGTCATGAAGATTTTGGACTAAACTTTGCCTCCGATCGTTGCGCCGGATCAg                                                                       >  1:1224760/1‑150 (MQ=255)
                                                                              gAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCg                                                                     <  2:1623146/150‑1 (MQ=255)
                                                                                 gAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCcgggttgtttttaccgcggcgggatc                                                                                                                             >  1:1544991‑M1/1‑65 (MQ=255)
                                                                                 gAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCcgggttgtttttaccgcggcgggatc                                                                                                                             <  2:1544991‑M1/91‑27 (MQ=255)
                                                                                 gAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCa                                                                  >  2:87816/1‑150 (MQ=255)
                                                                                 gAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCa                                                                  >  1:11615/1‑150 (MQ=255)
                                                                                   agagTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAg                                                                >  2:246019/1‑150 (MQ=255)
                                                                                     agTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCcgggttgtttttaccgcggcgg                                                                                                                                 >  2:913468‑M1/1‑61 (MQ=255)
                                                                                     agTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCcgggttgtttttaccgcggcgg                                                                                                                                 <  1:913468‑M1/83‑23 (MQ=255)
                                                                                       tCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCCAGGCCg                                                            >  2:965193/1‑150 (MQ=255)
                                                                                         aCGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGAt                                                          >  2:1860741/1‑150 (MQ=255)
                                                                                          cGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATAGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGAtt                                                         <  2:1377859/150‑1 (MQ=255)
                                                                                           ggCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTa                                                        >  1:421591/1‑150 (MQ=255)
                                                                                            gctgcgctgcCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGCTCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGACCGATTAc                                                       <  1:817975/150‑1 (MQ=255)
                                                                                             ctgcgctgcCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTAct                                                      <  2:1143496/150‑1 (MQ=255)
                                                                                                cgctgcCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGCTCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTActgct                                                   >  2:1600099/1‑150 (MQ=255)
                                                                                                cgctgcCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTActgct                                                   <  2:1177727/150‑1 (MQ=255)
                                                                                                cgctgcCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTActgct                                                   >  1:1652131/1‑150 (MQ=255)
                                                                                                 gctgcCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTActgctg                                                  <  1:1860741/150‑1 (MQ=255)
                                                                                                 gctgcCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTACGCCGGATCAGCGGCAAGGCCGATTActgctg                                                  <  2:1347375/150‑1 (MQ=255)
                                                                                                     cctgcTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATGCCTGCTGGGtt                                              >  1:366412/1‑150 (MQ=255)
                                                                                                       tgcTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTc                                            >  2:1461419/1‑150 (MQ=255)
                                                                                                        gcTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAg                                                                <  1:1393902/129‑1 (MQ=255)
                                                                                                        gcTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAg                                                                >  2:1393902/1‑129 (MQ=255)
                                                                                                         ctctCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCt                                          <  1:1461419/150‑1 (MQ=255)
                                                                                                         ctctCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCt                                          <  2:1704165/150‑1 (MQ=255)
                                                                                                            tcCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCTGCt                                       >  1:1111153/1‑150 (MQ=255)
                                                                                                            tcCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCTGCt                                       >  2:2350708/1‑150 (MQ=255)
                                                                                                            tcCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCTGCt                                       >  1:1446449/1‑150 (MQ=255)
                                                                                                              cAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCTGCTCg                                     >  2:1927317/1‑150 (MQ=255)
                                                                                                               aGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCTGCTCGc                                    >  1:582266/1‑150 (MQ=255)
                                                                                                                   aaTCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCCTTCATTAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCTTTCCCGAGGCCGATTACTGCTGGGTTTCCTGCTCGCTgcc                                >  1:623862/1‑148 (MQ=255)
                                                                                                                       atcCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGa                                                           <  1:525929/119‑1 (MQ=255)
                                                                                                                       atcCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGa                                                           >  2:525929/1‑119 (MQ=255)
                                                                                                                         ccTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCTGCTCGCTGAACATGTc                          >  2:1269250/1‑150 (MQ=255)
                                                                                                                               atcatAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCTGCTCGCTGAACATGTCGCTGaa                    >  2:1073393/1‑150 (MQ=255)
                                                                                                                                  atAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCTGCTc                                      <  1:1094513/129‑1 (MQ=255)
                                                                                                                                  atAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTACTGCTc                                      >  2:1094513/1‑129 (MQ=255)
                                                                                                                                    aaaCCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCTGCTCGCTGAACATGTCGCTGAACAGCa               <  2:2200257/150‑1 (MQ=255)
                                                                                                                                      aCCGATACCGCCGCGGTTCCCACTACTCCGGTTGGATCGCACTCATGAATATTGTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCTGCTCGCTGAACATGTCGCTGAACAGCATg             <  2:623862/150‑1 (MQ=255)
                                                                                                                                       ccGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCTGCTCGCTGAACATGTCGCTGAACAGCATGc            <  2:11615/150‑1 (MQ=255)
                                                                                                                                        cGATCCCGCCcgggttgtttttaccgcggcgggatcggtttatgatggcaggatgattttctggagagcaggcagcgcagccgtgactcttcctcaaggagtgaaagcatgaccttttcctttgcagccaaggcgggtgtcttgctggtg           <  1:874731‑M1/150‑141 (MQ=255)
                                                                                                                                         gATCCCGCCcgggttgtttttaccgcggcgggatcggtttatgatggcaggatgattttctggagagcaggcagcgcagccgtgactcttcctcaaggagtgaaagcatgaccttttcctttgcagccaaggcgggtgtcttgctggtgt          >  2:2390048‑M1/1‑9 (MQ=255)
                                                                                                                                         gATCCCGCCGCGGTAAAAACAACCCGggcgggatcggtttatgatggcaggatgattttctggagagcaggcagcgcagccgtgactcttc                                                                     >  1:1544991‑M2/1‑26 (MQ=255)
                                                                                                                                         gATCCCGCCGCGGTAAAAACAACCCGggcgggatcggtttatgatggcaggatgattttctggagagcaggcagcgcagccgtgactcttc                                                                     <  2:1544991‑M2/91‑66 (MQ=255)
                                                                                                                                         gATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCTGCTCGCTGAACATGTCGCTGAACAGCATGCTc          <  1:871380/150‑1 (MQ=255)
                                                                                                                                           tCCCGCCcgggttgtttttaccgcggcgggatcggtttatgatggcaggatgattttctggagagcaggcagcgcagccgtgactcttcctcaaggagtgaaagcatgaccttttcctttgcagccaaggcgggtgtcttgctggtgttt        <  1:2390048‑M1/150‑144 (MQ=255)
                                                                                                                                           tCCCGCCcgggttgtttttaccgcggcgggatcggtttatgatggcaggatgattttctggagagcaggcagcgcagccgtgactcttcctcaaggagtgaaagcatgaccttttcctttgcagccaaggcggg                        <  2:2315526‑M1/134‑128 (MQ=255)
                                                                                                                                           tCCCGCCcgggttgtttttaccgcggcgggatcggtttatgatggcaggatgattttctggagagcaggcagcgcagccgtgactcttcctcaaggagtgaaagcatgaccttttcctttgcagccaaggcggg                        >  1:2315526‑M1/1‑7 (MQ=255)
                                                                                                                                           tCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTActgct                                                   <  1:1981132/107‑1 (MQ=255)
                                                                                                                                           tCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTActgct                                                   >  2:1981132/1‑107 (MQ=255)
                                                                                                                                            cccGCCGCGGTAAAAACAACCCGggcgggatcggtttatgatggcaggatgattttctggagagcaggcagcgcagccgtgactcttcctcaaggagtgaaagcatgaccttttcctttgcagccaaggcgggtgtcttg                 >  2:462965‑M2/1‑23 (MQ=255)
                                                                                                                                            cccGCCGCGGTAAAAACAACCCGggcgggatcggtttatgatggcaggatgattttctggagagcaggcagcgcagccgtgactcttcctcaaggagtgaaagcatgaccttttcctttgcagccaaggcgggtgtcttg                 <  1:462965‑M2/140‑118 (MQ=255)
                                                                                                                                            cccGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCTGCTCGCTGAACATGTCGCTGAACAGCATGCTCGAc       <  2:1446449/150‑1 (MQ=255)
                                                                                                                                             ccgccgCGGTAAAAACAACCCGggcgggatcggtttatgatggcaggatgattttctggagagcaggcagcgcagccgtgact                                                                         >  2:913468‑M2/1‑22 (MQ=255)
                                                                                                                                             ccgccgCGGTAAAAACAACCCGggcgggatcggtttatgatggcaggatgattttctggagagcaggcagcgcagccgtgact                                                                         <  1:913468‑M2/83‑62 (MQ=255)
                                                                                                                                             ccgccgCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAAGCCGATTACTGCTGGGTTTCCTGCTCGCTGAACATGTCGCTGAACAGCATGCTCGACa      >  1:1668554/1‑150 (MQ=255)
                                                                                                                                             ccgcccgggttgtttttaccgcggcgggatcggtttatgatggcaggatgattttctggagagcaggcagcgcagccgtgactcttcctcaaggagtgaaagcatgaccttttcctttgcagccaaggcgggtgtcttgctggtgttttt      >  2:715376‑M1/1‑5 (MQ=255)
                                                                                                                                             ccgcccgggttgtttttaccgcggcgggatcggtttatgatggcaggatgattttctggagagcaggcagcgaagccgtgactcttcctcaaggagtgaaagcatgaccttttcctttgcagccaaggcgggtgtcttgctggtgttttt      <  1:2200257‑M1/150‑146 (MQ=255)
                                                                                                                                               gccgcGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCTGCTCGCTGAACATGTCGCTGAACAGCATGCTCGACAAg    >  1:222565/1‑150 (MQ=255)
                                                                                                                                                 cgcgGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGGCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCTGCTCGCTGAACATGTCGCTGAACAGCATGCTCGACAAGTa  <  2:582266/150‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                     
ACGAACAGCACGCTGCCGAAAAACACCAGCAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCGCGGTAAAAACAACCCGGGCGGGATCGCATTCATGAAGATTTTGCAATAAACCAGTCCGCCGATCGTTGCGCCGGATCAGCGGCAAGGCCGATTACTGCTGGGTTTCCTGCTCGCTGAACATGTCGCTGAACAGCATGCTCGACAAGTA  >  NC_002947/5190249‑5190543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.