New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6009165 =38 (0.410)11 (0.160) 10/184 NT 42.3% intergenic (+6/+76) norM/PP_5263 multidrug resistance protein NorM/GGDEF domain‑containing protein
?NC_002947 6009242 = 2 (0.030)coding (1667/1668 nt) PP_5263 GGDEF domain‑containing protein

GGCGGTGGTGCAGTCGGGATCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAAT  >  NC_002947/6009016‑6009284
                                                                                                                                                     |                                                                                                                       
ggtgtggagagtgaagagcagctgacgttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttag                                                                                                                         >  1:1472545‑M1/150‑150 (MQ=255)
ggtgtggagagtgaagagcagctgacgttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcggatttgctgcaggcgcctggccgccagttggagggtgtcctttag                                                                                                                         >  2:646968‑M1/150‑150 (MQ=255)
ggCGGTGGTGCAGTCGGGATCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCg                                                                                                                         <  2:1643660/150‑1 (MQ=255)
 gtgtggagagtgaagagcagctgacgttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttagg                                                                                                                        >  2:1870579‑M1/149‑150 (MQ=255)
 gtgtggagagtgaagagcagctgacgttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctctagg                                                                                                                        >  2:1908735‑M1/149‑150 (MQ=255)
 gtgtggagagtgaagagcagctgacgttgttgcgcgggtttggctgcgaccaggtgcaaggctgcctggtcagcagaccgctaccgaaagcggacttgatggccatcatgctgcgggcgtctggccgccagttggagggtgtgctttagg                                                                                                                        >  2:25990‑M1/149‑150 (MQ=255)
 gCGGTGGTGCAGTCGGGATCTGGTGGGGGCTGGCGCTGGGGCTGGCCTGTCCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCgg                                                                                                                        <  1:1744176/150‑1 (MQ=255)
  tgtggagagtgaagagcagctgacgttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaggg                                                                                                                       >  1:863711‑M1/148‑150 (MQ=255)
     ggagagtgcagagcagctgacgttgttgcgcgggtttggctgcgaccaggtgccaggcttcctggtccgcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCct                                                                                                                    >  2:1306793‑M1/145‑150 (MQ=255)
     ggagagtgaagagcagctgacgttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttagg                                                                                                                        >  1:535654‑M1/145‑146 (MQ=255)
     ggagagtgaagagcagctgacgttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttagg                                                                                                                        <  2:535654‑M1/2‑1 (MQ=255)
         gCAGTCGGGATCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTc                                                                                                                <  1:1987895/150‑1 (MQ=255)
         gCAGTCGGGATCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTc                                                                                                                >  2:1485612/1‑150 (MQ=255)
         agtgaagagcagctgacgttgttgcgcgggtctgcctgcgacaaggtagtatgcgtcctgttcagcagaccgctaccgataggggaattgacggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTc                                                                                                                >  2:1242981‑M1/141‑150 (MQ=255)
           tgaagagcagctgacgttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTcgc                                                                                                              <  2:1788608‑M1/12‑1 (MQ=255)
           tgaagagcagctgacgttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTcgc                                                                                                              <  2:1896981‑M1/12‑1 (MQ=255)
           aGTCGGTATCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGCGGAGGTTCATACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTcgc                                                                                                              <  2:81436/150‑1 (MQ=255)
            gaagagcagctgacgttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgcttcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTcgcg                                                                                                             >  2:333196‑M1/138‑150 (MQ=255)
             tCGGGATCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCgg                                                                                                                        >  1:2185152/1‑138 (MQ=255)
             tCGGGATCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCgg                                                                                                                        <  2:2185152/138‑1 (MQ=255)
             tCGGGATCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCgg                                                                                                            <  2:657774/150‑1 (MQ=255)
             aagagcagctgacgttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTCGCgg                                                                                                            >  1:2348617‑M1/137‑150 (MQ=255)
             aagagcagctgacgttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTCGCgg                                                                                                            >  2:995779‑M1/137‑150 (MQ=255)
             aagagcagctgacgttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTCGCgg                                                                                                            >  2:74920‑M1/137‑150 (MQ=255)
              cGGGATCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCggg                                                                                                           <  2:38385/150‑1 (MQ=255)
               gagcagctgacgttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTCGCGGGc                                                                                                          >  2:1867165‑M1/135‑150 (MQ=255)
                 gcagctgacgttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTCGCGggcgt                                                                                                        >  2:302469‑M1/133‑148 (MQ=255)
                     ctgacgttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTCGCGGGCACGccc                                                                                                    <  2:2207725‑M1/22‑1 (MQ=255)
                       gtggGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCGGACCTTTGGGTTTGGGAGGCGGATGAACCGGTGGTTGGGTAAGGCGGGGGATCGTACGGAAGCTGCTGTTTCTGCCTGGCCTCCGGGCCTCTGCGCGGGCACgcgcgc                                                                                                  >  2:1524460/1‑150 (MQ=255)
                          gttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtgtttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTCGCGGGCACGCCCGCTcc                                                                                               <  1:2432867‑M1/27‑1 (MQ=255)
                          gttgttgcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTCGCGGGCACGCCCGCTcc                                                                                               <  1:823158‑M1/27‑1 (MQ=255)
                            ggCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCca                                                                                             <  1:1808962/150‑1 (MQ=255)
                              cTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCcaca                                                                                           <  1:306584/150‑1 (MQ=255)
                                ggCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAgg                                                                                         <  1:862307/150‑1 (MQ=255)
                                gcgcgggtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTCGCGGGCACGCCCGCTCCCACAgg                                                                                         >  1:2207725‑M1/118‑150 (MQ=255)
                                   gcTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGAtt                                                                                      <  2:462915/150‑1 (MQ=255)
                                    cTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTg                                                                                     >  1:18206/1‑150 (MQ=255)
                                    cTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTg                                                                                     >  1:18238/1‑150 (MQ=255)
                                     tGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAgggaccg                                                                                    >  2:561342/1‑145 (MQ=255)
                                      gtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCctct                                                                                                                  >  1:178250‑M1/112‑119 (MQ=255)
                                      gtttggctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCctct                                                                                                                  <  2:178250‑M1/8‑1 (MQ=255)
                                      ggggCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTgcg                                                                                   <  1:301350/150‑1 (MQ=255)
                                          cTGGCAGGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGCCTTCCGGGCCTATTCGCGACCCCGCCCGCTCCCACAGGATTGCGCGGt                                                                               <  1:655326/150‑1 (MQ=255)
                                           tGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGcgcg                                                                                 <  1:836885/147‑1 (MQ=255)
                                           tGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGcgcg                                                                                 >  2:836885/1‑147 (MQ=255)
                                           gctgcgaccaggtacaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTc                                                                              >  1:1463469‑M1/107‑150 (MQ=255)
                                            ctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTc                                                                                                                >  2:1767629‑M1/106‑115 (MQ=255)
                                            ctgcgaccaggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTc                                                                                                                <  1:1767629‑M1/10‑1 (MQ=255)
                                                 gtgCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCtgtg                                                                        <  2:2237151/150‑1 (MQ=255)
                                                  tgCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTgg                                                                       <  2:18206/150‑1 (MQ=255)
                                                  tgCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTgg                                                                       <  2:18238/150‑1 (MQ=255)
                                                  ggcggcgGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTgg                                                                       <  1:1524460/149‑1 (MQ=255)
                                                    cggcggTGGCGCTGACCTTTGGCTTTGGCCGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGa                                                                     <  1:1819143/150‑1 (MQ=255)
                                                    cggcggTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGa                                                                     <  2:2377403/150‑1 (MQ=255)
                                                    cggcggTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGa                                                                     <  1:329454/150‑1 (MQ=255)
                                                    aggtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtgtttgctgcaggcgcctggccgccagttggagggtgtcctttaTTTCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGa                                                                     >  2:2432867‑M1/98‑150 (MQ=255)
                                                      gtgcaaggcttcctggtcagcagaccgctaccgataggggaattgatggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGc                                                                   >  1:1896981‑M1/96‑150 (MQ=255)
                                                         gTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGATTCGGCCTGACTTCTTCGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCggg                                                                <  1:1485612/150‑1 (MQ=255)
                                                          tGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGc                                                               <  1:1896032/150‑1 (MQ=255)
                                                          tGGCGCTGACCTTTGGCTTGGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGACCTCTTCGCGGGCACGCCCGGACGCACCGGATTGCGCGGTCCCTGTGGGAGCGGGc                                                               <  1:1146087/150‑1 (MQ=255)
                                                                  aCCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCtgt                                                                         >  1:2445745/1‑132 (MQ=255)
                                                                  aCCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCtgt                                                                         <  2:2445745/132‑1 (MQ=255)
                                                                     tttGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCgg                                                                                                                        >  2:1840127/1‑82 (MQ=255)
                                                                     tttGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCgg                                                                                                                        <  1:1840127/82‑1 (MQ=255)
                                                                     tttGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCGTGCCCGcgaag                                                                                              <  1:1883608/108‑5 (MQ=39)
                                                                     tttGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCGTGCCCGcgaag                                                                                              >  2:1883608/1‑104 (MQ=255)
                                                                         gCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTgg                                                                       <  2:419676/127‑1 (MQ=255)
                                                                         gCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTgg                                                                       >  1:419676/1‑127 (MQ=255)
                                                                                           aaCGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTgg                                                                       >  2:1044271/1‑109 (MQ=255)
                                                                                           aaCGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTgg                                                                       <  1:1044271/109‑1 (MQ=255)
                                                                                                  gttgGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCtgt                                                                         >  1:2262465/1‑100 (MQ=255)
                                                                                                  gttgGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCtgt                                                                         <  2:2262465/100‑1 (MQ=255)
                                                                                                    tggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGc                                                                   <  2:1793854‑M1/55‑1 (MQ=255)
                                                                                                    tggcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGc                                                                   >  1:1793854‑M1/50‑104 (MQ=255)
                                                                                                      gcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAg                                                                    >  1:772304‑M1/48‑101 (MQ=255)
                                                                                                      gcgtatttgctgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAg                                                                    <  2:772304‑M1/54‑1 (MQ=255)
                                                                                                                tgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTgg                                                                       >  2:1147258‑M1/38‑88 (MQ=255)
                                                                                                                tgcaggcgcctggccgccagttggagggtgtcctttaGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTgg                                                                       <  1:1147258‑M1/51‑1 (MQ=255)
                                                                                                                       tACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAAt  >  1:1788608/1‑150 (MQ=255)
                                                                                                                          tggccgccagttggagggtgtcctttaGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCt                                                                           >  2:1776141‑M1/28‑74 (MQ=255)
                                                                                                                          tggccgccagttggagggtgtcctttaGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCt                                                                           <  1:1776141‑M1/47‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                       
GGCGGTGGTGCAGTCGGGATCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAAT  >  NC_002947/6009016‑6009284

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.