New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	209102 =	NA (NA)	4 (0.040)	3/250	NT	100%	coding (14608/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	209737 =	0 (0.000)					coding (15243/26049 nt)	PP_0168	putative surface adhesion protein

GCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACTGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAG  >  NC_002947/209612‑209884                                                                                                                              |                                                                                                                                                    gttttgtcgagtgtcagttgctcgaacgtaccgacgtccgcacctccaacggttgcgatcgacatcacgacagggtcgttggtgccgacgtagacgttgtccggggcagtgacggtagcagtgccCACGGTGCCGGCCAACGGCACCGTg                                                                                                                             <  1:2334223‑M2/25‑1 (MQ=255)                                                                 tcacgacagggtcgttagcgccgacgtagacgttgtccggagcagtcacggtggcagtgccCACTGTGCCGGCCAACGGCACCg                                                                                                                               >  1:1790288‑M2/62‑84 (MQ=255)                                                                 tcacgacagggtcgttagcgccgacgtagacgttgtccggagcagtcacggtggcagtgccCACTGTGCCGGCCAACGGCACCg                                                                                                                               <  2:1790288‑M2/23‑1 (MQ=255)                                                                                                                acggtggcagtgccCACGGTGCCGTTGGCCGGCACAGTGGGCACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCtt              >  2:264761‑M2/15‑150 (MQ=255)                                                                                                                            ccCACTGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAg  >  2:645598‑M2/3‑150 (MQ=255)                                                                                                                              |                                                                                                                                                    GCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACTGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAG  >  NC_002947/209612‑209884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.