New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 342930 =87 (0.930)5 (0.060) 5/234 NT 5.7% intergenic (+58/+74) gabP‑I/PP_5439 gamma‑aminobutyrate permease/hypothetical protein
?NC_002947 342979 = 85 (0.970)intergenic (+107/+25) gabP‑I/PP_5439 gamma‑aminobutyrate permease/hypothetical protein

Only 100 of 118 total aligned reads displayed.

CCGCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTCCAGCCAGGCCATGGTGGTCTCTTCGTCAGCGCCATCCA  >  NC_002947/342830‑343125
                                                                                                                                                     |                                                                                                                                                   
ccGCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGccc                                                                                                                                                     <  1:752056/150‑1 (MQ=255)
ccGCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGccc                                                                                                                                                     >  1:754420/1‑150 (MQ=255)
 cGCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCCCAGGCCCg                                                                                                                                                    >  2:1316280/1‑150 (MQ=255)
 cGCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCg                                                                                                                                                    >  2:202309/1‑150 (MQ=255)
 cGCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCg                                                                                                                                                    >  2:2291252/1‑150 (MQ=255)
   cAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGAGAATCCCGCAGGTTCACCACAGGCCCGTa                                                                                                                                                  <  1:1243393/150‑1 (MQ=255)
    aaGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAg                                                                                                                                                 <  2:841598/150‑1 (MQ=255)
          gAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCgg                                                                                                                                           <  2:195942/150‑1 (MQ=255)
          gAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCgg                                                                                                                                           <  2:1733751/150‑1 (MQ=255)
                 ccGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTatat                                                                                                                                    <  1:1923911/150‑1 (MQ=255)
                  cgggcgggCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGCTGGCCCTTTCGCAGGCAAGCCCGCACGTTCACCACAGGCCCGTAGGAGCGGGTTATCTg                                                                                                                                   >  2:164765/1‑150 (MQ=255)
                   gggcgggcGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATgg                                                                                                                                  <  2:1816463/150‑1 (MQ=255)
                       gggcggCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCt                                                                                                                              <  1:1762942/150‑1 (MQ=255)
                                tGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATg                                                                                                                                   <  1:1290674/136‑1 (MQ=255)
                                       cTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCtt                                                                                                              <  1:2291252/150‑1 (MQ=255)
                                       cTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCtt                                                                                                              <  2:37824/150‑1 (MQ=255)
                                          aTCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTctg                                                                                                           <  2:121893/150‑1 (MQ=255)
                                          aTCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGACTATTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTctg                                                                                                           <  1:1331369/150‑1 (MQ=255)
                                           tCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTctgc                                                                                                          >  2:1038600/1‑150 (MQ=255)
                                                    gctgAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑Ttgctgc                                                                                                >  1:2302953/1‑150 (MQ=255)
                                                    gctgAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGACTTTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑Ttgctgc                                                                                                <  1:1357502/150‑1 (MQ=255)
                                                      tgAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAAc                                                                                                                   >  2:1830001/1‑130 (MQ=255)
                                                      tgAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAAc                                                                                                                   <  1:1830001/130‑1 (MQ=255)
                                                      tgAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑Ttgctgc                                                                                                >  2:593222/1‑148 (MQ=255)
                                                      tgAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑Ttgctgc                                                                                                <  1:593222/148‑1 (MQ=255)
                                                      tgAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCAGAACCGCTGCTGATG‑Ttgactctg                                                                                              >  2:2353334/1‑144 (MQ=255)
                                                       gAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑Ttgctgctgc                                                                                             <  1:1360378/150‑1 (MQ=255)
                                                         aaTGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCtt                                                                                           >  2:2247886/1‑150 (MQ=255)
                                                         aaTGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCtt                                                                                           <  1:1038600/150‑1 (MQ=255)
                                                          aTGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTg                                                                                          <  1:2247886/150‑1 (MQ=255)
                                                             agaAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGaa                                                                                                                    >  1:2445512/1‑122 (MQ=255)
                                                              gaAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGtt                                                                                                                                        >  2:1383601/1‑101 (MQ=255)
                                                              gaAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGtt                                                                                                                                        <  1:1383601/101‑1 (MQ=255)
                                                              gaAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGcca                                                                                      >  2:265309/1‑150 (MQ=255)
                                                                 ggCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGccacca                                                                                   >  1:729483/1‑150 (MQ=255)
                                                                   ccGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCGTCTGCTG‑TTGCTGCTGCTTGGCCGCCAGt                                                                                 >  1:1121101/1‑150 (MQ=255)
                                                                     gcgcCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTc                                                                               <  1:370998/150‑1 (MQ=255)
                                                                        cccTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGa                                                                            <  1:265309/150‑1 (MQ=255)
                                                                          cTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTCGGAGCGGGTTTTATGGTCATGGCAGCGGTAGAGCGTCGTCTG‑GGTCCGGGGCTTGGCCATCAGTTCGGAAg                                                                          >  2:1104374/1‑150 (MQ=255)
                                                                           tgtgAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCt                                                                                                                              >  2:1228864/1‑98 (MQ=255)
                                                                           tgtgAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCt                                                                                                                              <  1:1228864/98‑1 (MQ=255)
                                                                             tgACGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAgcgg                                                                       <  1:1299320/150‑1 (MQ=255)
                                                                             tgAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCtt                                                                                           <  2:2213133/130‑1 (MQ=255)
                                                                                   gTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGatat                                                                 <  2:1132953/150‑1 (MQ=255)
                                                                                   gTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGatat                                                                 <  2:2341499/150‑1 (MQ=255)
                                                                                       ggCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGc                                                             <  2:1905248/150‑1 (MQ=255)
                                                                                       ggCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGATTATACACCTGTTCGGAAGCGGCGATATAGGc                                                             >  1:1817617/1‑150 (MQ=255)
                                                                                        gcattattttGTGGCCTGTGATTGCCCGTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCg                                                            >  2:1971572/7‑150 (MQ=255)
                                                                                         ccTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGt                                                           <  1:2353334/150‑1 (MQ=255)
                                                                                                ttGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGaa                                                    <  1:1316280/150‑1 (MQ=255)
                                                                                                ttGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGaa                                                    <  2:848520/150‑1 (MQ=255)
                                                                                                ttGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGaa                                                    <  1:2233967/150‑1 (MQ=255)
                                                                                                 tgtgGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAAc                                                   <  1:1917265/150‑1 (MQ=255)
                                                                                                  gtgGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACt                                                  <  2:1338846/150‑1 (MQ=255)
                                                                                                   tgGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCtt                                                                                                              >  2:84882/1‑90 (MQ=255)
                                                                                                   tgGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCtt                                                                                                              <  1:84882/90‑1 (MQ=255)
                                                                                                   tgGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACtc                                                 <  2:754420/150‑1 (MQ=255)
                                                                                                   tgGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACtc                                                 >  2:398205/1‑150 (MQ=255)
                                                                                                    GGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACtca                                                >  1:1104374‑M1/1‑150 (MQ=255)
                                                                                                     gcctgtggtgaacctgcgggcttgccctcgaaagggccatcacaggccCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAg                                                               <  1:532648‑M2/86‑1 (MQ=255)
                                                                                                     gcctgtggtgaacctgcgggcttgcccgcgaaagggccatcacaggccCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAg                                                               >  2:532648‑M2/49‑134 (MQ=255)
                                                                                                     GCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACtcat                                               <  1:891710‑M1/150‑1 (MQ=255)
                                                                                                         gtggtgaacctgcgggcttgcccgcgaaagggccatcacaggccCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTg                                                                                          <  1:2045174‑M2/59‑1 (MQ=255)
                                                                                                         gtggtgaacctgcgggcttgcccgcgaaagggccatcacaggccCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTg                                                                                          >  2:2045174‑M2/45‑103 (MQ=255)
                                                                                                            gtgaacctgcgggcttgcccgcgaaagggccatcacaggccCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCGCtctc                                        >  1:172286‑M2/42‑150 (MQ=255)
                                                                                                                cccTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAgcggc                                                                      <  2:852689/116‑1 (MQ=255)
                                                                                                                cccTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAgcggc                                                                      >  1:852689/1‑116 (MQ=255)
                                                                                                                 ccTTTCGCGGGCAAGAACGAAGGTTCGCCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTccagcc                                   >  1:54278/1‑150 (MQ=255)
                                                                                                                  cTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTccagcca                                  >  1:1012967/1‑150 (MQ=255)
                                                                                                                   tttCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTccagccag                                 >  2:1052554/1‑150 (MQ=255)
                                                                                                                   tttCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTccagccag                                 >  1:751832/1‑150 (MQ=255)
                                                                                                                    cctgcgGGCTTGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTCCAGCCAgg                                >  1:772438/4‑150 (MQ=255)
                                                                                                                     tCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGGTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGAGTCCTGGAACTCATCACTCTCCAGCCAGGc                               >  1:827778/1‑150 (MQ=255)
                                                                                                                          ggCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTCCAGCCAGGCCAtgg                          <  2:149296/150‑1 (MQ=255)
                                                                                                                           gCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTCCAGCCAGGCCAtggt                         >  2:2146543/1‑150 (MQ=255)
                                                                                                                            cAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGATTTAAGGG‑GTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTCCAGCCAGGCCAtggtg                        <  1:1971572/150‑1 (MQ=255)
                                                                                                                              aGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTCCAGCCAGGCCATggtggt                      <  1:2182172/150‑1 (MQ=255)
                                                                                                                              aGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTCCAGCCAGGCCATggtggt                      <  2:237147/150‑1 (MQ=255)
                                                                                                                               gCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCa                                                                                                                          >  1:2420289/1‑50 (MQ=255)
                                                                                                                               gCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCa                                                                                                                          <  2:2420289/50‑1 (MQ=255)
                                                                                                                               gCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTCCAGCCAGGCCATGGTGGtc                     >  2:528956/1‑150 (MQ=255)
                                                                                                                                 ccGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGCACAGGAGACTGATGTGTCCTGGAACTCATCACTCTCCAGCCAGGCCATGGTGGtctc                   >  2:2276445/1‑150 (MQ=255)
                                                                                                                                  cGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTCTCAGCCGACCTG‑TTGTCCAGCTGGCGGTTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTCCAGCCAGGCCATGGTGGActct                  <  1:1223212/150‑1 (MQ=255)
                                                                                                                                    cAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTCCAGCCAGGCCATGGTGGTCTCTTc                <  1:2067687/150‑1 (MQ=255)
                                                                                                                                    cAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTCCAGCCAGGCCATGGTGGTCTCTTc                <  2:365042/150‑1 (MQ=255)
                                                                                                                                     aGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTccagccag                                 <  1:588564/132‑1 (MQ=255)
                                                                                                                                     aGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTccagccag                                 >  2:588564/1‑132 (MQ=255)
                                                                                                                                        ttCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACt                                                                                                                  >  1:1977420/1‑49 (MQ=255)
                                                                                                                                         tCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTCCAGCCAGGCCATGGTGGTCTCTTCGTCAg           >  1:577876/1‑150 (MQ=255)
                                                                                                                                          cgccacAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTCCAGCCAGGCCATGGTGGTCTCTTCGTCAgc          <  2:54278/148‑1 (MQ=255)
                                                                                                                                             cacaggccCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGc                                                                                        >  1:1212260‑M2/9‑69 (MQ=255)
                                                                                                                                             cacaggccCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGc                                                                                        <  2:1212260‑M2/61‑1 (MQ=255)
                                                                                                                                             cacaggccCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGa                                                                            <  1:2266557‑M2/73‑1 (MQ=255)
                                                                                                                                             cacaggccCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAgcggc                                                                      >  1:1098726‑M2/9‑87 (MQ=255)
                                                                                                                                             cacaggccCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAgcggc                                                                      <  2:1098726‑M2/79‑1 (MQ=255)
                                                                                                                                             cacaggccCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTCCAGCCAGGCCATGGTGGTCTCTTCGTCAGCGcc       >  2:1035151‑M2/9‑150 (MQ=255)
                                                                                                                                              acaggccCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTCCAGCCAGGCCATGGTGGTCTCTTCGTCAGCGCCa      >  2:670134‑M2/8‑150 (MQ=255)
                                                                                                                                                aggccCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACtcatca                                             <  2:379004‑M2/104‑1 (MQ=255)
                                                                                                                                                aggccCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACtcatca                                             >  1:379004‑M2/6‑109 (MQ=255)
                                                                                                                                                  gccCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTCCAGCCAGGCCATGGTGGTCTCTTCGTCAGCGCCATCCa  >  1:1040052‑M2/4‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CCGCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCGTAGGAGCGGGTTATATGGCCCTGTCAGCCGAACTGCTTCTGCTG‑TTGCTGCTGCTTGGCCACCAGTTCGGAAGCGGCGATATAGGCGTCCTGGAACTCATCACTCTCCAGCCAGGCCATGGTGGTCTCTTCGTCAGCGCCATCCA  >  NC_002947/342830‑343125

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.