New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 95978395 (1.020)7 (0.080) 6/236 NT 6.8% coding (49/411 nt) PP_0821 hypothetical protein
?NC_002947 = 959790 102 (1.160)coding (56/411 nt) PP_0821 hypothetical protein

Only 100 of 115 total aligned reads displayed.

CCCTGGGGGTAACGTTGTATGCAGCGACGCAAATGCCCTCGCTGCGCTTCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCAGGACCAGCGCTTGAACCGGGTGTACAAG  >  NC_002947/959641‑959938
                                                                                                                                                      |                                                                                                                                                    
     ggggTAACGTTGTATGCAGCGACGCAAATGCCCTCGCTGCGCTTCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTggcct                                                                                                                                                 >  1:860404‑M2/1‑145 (MQ=255)
            taaagTATGCAGCGACGCAAATGCCCTCGCTGCGCTTCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCt                                                                                                                                          >  1:461830/5‑150 (MQ=255)
               tGTATGCAGCGACGCAAATGCCCTCGCTGCGCTTCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTAcc                                                                                                                                       <  2:289905/150‑1 (MQ=255)
                 tATGCAGCGACGCAAATGCCCTCGCTGCGCTTCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCgg                                                                                                                                     >  1:1811632/1‑150 (MQ=255)
                   tGCAGCGACGCAAATGCCCTCGCTGCGCTTCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTa                                                                                                                                   >  2:2081609/1‑150 (MQ=255)
                    gCAGCGACGCAAATGCCCTCGCTGCGCTTCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAg                                                                                                                                  <  2:229388/150‑1 (MQ=255)
                      aGCGACGCAAATGCCCTCGCTGCGCTTCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCa                                                                                                                                >  2:1035977/1‑150 (MQ=255)
                          aCGCCAATGCCCGCGCTGCGCTTCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGGGGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATgg                                                                                                                            <  1:636709/150‑1 (MQ=255)
                           cGCAAATGCCCTCGCTGCGCTTCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGc                                                                                                                           <  2:2274052/150‑1 (MQ=255)
                           cGCAAATGCCCTCGCTGCGCTTCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGc                                                                                                                           <  1:1120811/150‑1 (MQ=255)
                               aaTGCCCTCGCTGCGCTTCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGAc                                                                                                                       <  1:2081609/150‑1 (MQ=255)
                                 tGCCCTCGCTGCGCTTCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGa                                                                                                                     <  2:1811632/150‑1 (MQ=255)
                                    ccTCGCTGCGCTTCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTa                                                                                                                  >  1:441443/1‑150 (MQ=255)
                                    ccTCGCTGCGCTTCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTa                                                                                                                  >  1:792030/1‑150 (MQ=255)
                                      tCGCTGCGCTTCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTaca                                                                                                                >  2:442928/1‑150 (MQ=255)
                                               ttCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCt                                                                                                       >  1:1227991/1‑150 (MQ=255)
                                               ttCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCt                                                                                                       >  1:242303/1‑150 (MQ=255)
                                                 cGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTCCCAT‑ATCGTAGTATTACCTGTCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTAc                                                                                                     <  1:289672/150‑1 (MQ=255)
                                                   aGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACgg                                                                                                   <  1:2041414/150‑1 (MQ=255)
                                                    gtcAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACggg                                                                                                  >  1:1490019/3‑150 (MQ=255)
                                                    gCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACggg                                                                                                  <  2:86657/150‑1 (MQ=255)
                                                     ccAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGc                                                                                                 >  1:782136/1‑150 (MQ=255)
                                                            aGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCAt                                                                                          <  2:792030/150‑1 (MQ=255)
                                                             ggTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATg                                                                                         <  1:976915/150‑1 (MQ=255)
                                                              gTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAg                                                                                               <  2:671969/143‑1 (MQ=255)
                                                              gTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAg                                                                                               >  1:671969/1‑143 (MQ=255)
                                                               ggCTGAGGCCCCCGGAGAAGCCGCCGACGCTTAGACACCCACAAGGCGGGTTCGCCTGATC‑ACGCATTCCCTGGCAGGCCTGGCACTCGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGa                                                                                       <  2:1086490/149‑1 (MQ=255)
                                                                   gATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCCATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAg                                                                                   <  2:461830/150‑1 (MQ=255)
                                                                   gATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAg                                                                                   >  2:1416420/1‑150 (MQ=255)
                                                                   gATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGAAGGTGG‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAg                                                                                   >  1:169473/1‑150 (MQ=255)
                                                                      gCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCa                                                                                                >  1:2191813/1‑134 (MQ=255)
                                                                      gCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCa                                                                                                <  2:2191813/134‑1 (MQ=255)
                                                                       ccTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCt                                                                               <  1:1035977/150‑1 (MQ=255)
                                                                        cTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATCGCGGACGATTACACGGCGGCCTACGGGCAGCGCATGGACAAGGCCTc                                                                              <  2:1227991/150‑1 (MQ=255)
                                                                         tCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTcc                                                                             >  1:1923793/1‑150 (MQ=255)
                                                                                   ccGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTgg                                                                   <  1:1416420/150‑1 (MQ=255)
                                                                                       aGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCAt                                                               <  2:2033591/150‑1 (MQ=255)
                                                                                         aCGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCa                                                                            >  2:1087114/1‑135 (MQ=255)
                                                                                         aCGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCa                                                                            <  1:1087114/135‑1 (MQ=255)
                                                                                         aCGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGa                                                             <  2:441443/150‑1 (MQ=255)
                                                                                           gCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAgc                                                           >  1:2294024/1‑150 (MQ=255)
                                                                                           gCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAgc                                                           >  1:1781949/1‑150 (MQ=255)
                                                                                             tttGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTgg                                                                   <  1:1288710/140‑1 (MQ=255)
                                                                                             tttGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTAACGGTAGCAATGGCGGACGATTACACGGCGGCCTACg                                                                                                    >  1:1286183/1‑107 (MQ=255)
                                                                                             tttGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTAACGGTAGCAATGGCGGACGATTACACGGCGGCCTACg                                                                                                    <  2:1286183/107‑1 (MQ=255)
                                                                                                 aTACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGc                                                     >  2:1386253/1‑150 (MQ=255)
                                                                                                  tACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGa                                                                                       <  2:1611467/115‑1 (MQ=255)
                                                                                                  tACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGa                                                                                       >  1:1611467/1‑115 (MQ=255)
                                                                                                     ccaccaGTAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCg                                                 <  2:169473/150‑1 (MQ=255)
                                                                                                     ccACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTAc                                                                                                     >  2:1052678/1‑98 (MQ=255)
                                                                                                     ccACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTAc                                                                                                     <  1:1052678/98‑1 (MQ=255)
                                                                                                      cacaAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACAcggc                                                                                                            <  2:858185/90‑1 (MQ=255)
                                                                                                      cacaAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCgg                                                >  1:1640264/1‑150 (MQ=255)
                                                                                                      cacaAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCgg                                                >  1:98392/1‑150 (MQ=255)
                                                                                                      cacaAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCgg                                                >  2:340778/1‑150 (MQ=255)
                                                                                                       acaAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGGGTGCATCggg                                               >  1:499094/1‑150 (MQ=255)
                                                                                                        caAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCgggg                                              <  2:1923793/150‑1 (MQ=255)
                                                                                                          aggaggGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGcc                                            <  2:1490019/150‑1 (MQ=255)
                                                                                                               ggTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAac                                       >  1:792790/1‑150 (MQ=255)
                                                                                                                 ttAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGAc                                                                                                                       <  1:492848/68‑1 (MQ=255)
                                                                                                                 ttAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGAc                                                                                                                       >  2:492848/1‑68 (MQ=255)
                                                                                                                 ttAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGCAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAacac                                     >  1:1326609/1‑150 (MQ=255)
                                                                                                                 ttAGCATGATC‑AAGCATTACCTCGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAacac                                     >  1:1253866/1‑150 (MQ=255)
                                                                                                                     cATGATC‑GAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAg                                                                                   >  2:2207180/1‑100 (MQ=255)
                                                                                                                     cATGATC‑GAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAg                                                                                   <  1:2207180/100‑1 (MQ=255)
                                                                                                                       tGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAACACAAGTGc                               >  1:1766350/1‑150 (MQ=255)
                                                                                                                        gATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCa                              >  2:2002568/1‑150 (MQ=255)
                                                                                                                         aTC‑AAGCATTACCTGGCAGGTCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCg                                                                                                                          <  1:929995/57‑1 (MQ=255)
                                                                                                                         aTC‑AAGCATTACCTGGCAGGTCTGGCACTGGCCTGCGTGCTACCGGTAGCAAGGGCg                                                                                                                          >  2:929995/1‑57 (MQ=255)
                                                                                                                           c‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCAGGa                           >  1:1976509/1‑150 (MQ=255)
                                                                                                                           c‑AAGCATTACCCGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCa                                                                                                >  1:1573006/1‑81 (MQ=255)
                                                                                                                           c‑AAGCATTACCCGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCa                                                                                                <  2:1573006/81‑1 (MQ=255)
                                                                                                                               gCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCg                                                                                                                          >  1:206027/1‑52 (MQ=255)
                                                                                                                                cATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAg                                                                                                                                  >  2:932718/1‑43 (MQ=255)
                                                                                                                                cATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAg                                                                                                                                  <  1:932718/43‑1 (MQ=255)
                                                                                                                                 aTTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTc                                                                              <  2:598046/94‑1 (MQ=255)
                                                                                                                                 aTTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCAGGACCAgc                      >  2:644886/1‑150 (MQ=255)
                                                                                                                                  ttACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGa                                                             <  1:2346965/110‑1 (MQ=255)
                                                                                                                                  ttACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGa                                                             >  2:2346965/1‑110 (MQ=255)
                                                                                                                                     ccTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCAGGACCAGCGCtt                  >  1:875176/1‑150 (MQ=255)
                                                                                                                                      cTGGCAGGCCTGGCACTGGCGTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCAGGACCAGCGCTTg                 >  1:1211723/1‑150 (MQ=255)
                                                                                                                                       tGGCAGGCCTGGCACTggcctgccaggtaatgcttgatcatgctaaccctccttgtgggtatcaaagcgtctgcggctgctccggaggcatcagcaccttgcctggctcgaagcgcagcgagggcatttgcgtcgctgcatacaacgtta                <  2:617568‑M2/150‑135 (MQ=255)
                                                                                                                                       tGGCAGGCCTGGCACTggcctgccaggtaatgcttgatcatgctaaccctccttgtgggtatcaaagcgtctgcgg                                                                                          >  2:644036‑M2/1‑16 (MQ=255)
                                                                                                                                       tGGCAGGCCTGGCACTggcctgccaggtaatgcttgatcatgctaaccctccttgtgggtatcaaagcgtctgcgg                                                                                          <  1:644036‑M2/76‑61 (MQ=255)
                                                                                                                                       tGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCAGGACCAGCGCTTGa                <  2:1976509/150‑1 (MQ=255)
                                                                                                                                        ggCAGGCCTGGCACTggcctgccaggtaatgcttgatcatgctaaccctccttgtgggtatcaaagcgtctgcggctgctccggaggcatcagcaccttgcctggctcgaagcgcagcgagggcatttgcgtcgctgcatacaacgtt                 <  1:1017595‑M2/148‑134 (MQ=255)
                                                                                                                                        ggCAGGCCTGGCACTggcctgccaggtaatgcttgatcatgctaaccctccttgtgggtatcaaagcgtctgcggctgctccggaggcatcagcaccttgcctggctcgaagcgcagcgagggcatttgcgtcgctgcatacaacgtt                 >  2:1017595‑M2/1‑15 (MQ=255)
                                                                                                                                         gCAGGCCTGGCACTggcctgccaggtaatgcttgatcatgctaaccctccttgtgg                                                                                                            >  2:2153262‑M2/1‑14 (MQ=255)
                                                                                                                                           aGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCAGGACCAGCGCTTGAACCg            <  1:442928/150‑1 (MQ=255)
                                                                                                                                           aGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCAGGACCAGCGCTTGAACCg            >  2:1456140/1‑150 (MQ=255)
                                                                                                                                            ggCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCAGGACCAGCGCTTGAACCgg           <  2:361805/150‑1 (MQ=255)
                                                                                                                                            ggCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCAGGACCAGCGCTTGAACCgg           <  1:261447/150‑1 (MQ=255)
                                                                                                                                            ggCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCAGGACCAGCGCTTGAACCgg           <  1:1456140/150‑1 (MQ=255)
                                                                                                                                               cTGGCACTGGCCTGCGTGCTACCGGTAGCCATGGCGGCCGCTTACACGGCGGCCTACGGGCAGTGCGTGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGCGGCCGAAACGCAAGTGCAGGACCAGCGCTTGAACCGGgtg        >  2:629757/1‑150 (MQ=255)
                                                                                                                                               cTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCTATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCAGGACCAGCGCTTGAACCGGgtg        >  1:1692027/1‑150 (MQ=255)
                                                                                                                                                 ggCNCTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCAGGACCAGCGCTTGAACCGGGTGTa      >  2:1500042/1‑150 (MQ=255)
                                                                                                                                                 ggCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGCCGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCTATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCAGGACCAGCGCTTGAACCGGGTGTa      <  2:1692027/150‑1 (MQ=255)
                                                                                                                                                   cACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCAGGACCAGCGCTTGAACCGGGTGTACa    >  1:732605/1‑150 (MQ=255)
                                                                                                                                                   cACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCAGGACCAGCGCTTGAACCGGGTGTACa    <  2:792790/150‑1 (MQ=255)
                                                                                                                                                     cTGGCCCGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCTTGGCCGAAACACAAGTGCAGGACCAGCGCTTGAACCGGGTGTACAag  >  1:522026/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
CCCTGGGGGTAACGTTGTATGCAGCGACGCAAATGCCCTCGCTGCGCTTCGAGCCAGGCAAGGTGCTGATGCCTCCGGAGCAGCCGCAGACGCTTTGATACCCACAAGGAGGGTTAGCATGATC‑AAGCATTACCTGGCAGGCCTGGCACTGGCCTGCGTGCTACCGGTAGCAATGGCGGACGATTACACGGCGGCCTACGGGCAGTGCATGGACAAGGCCTCCAGCACCGTGGCCATGAGCGCGTGCATCGGGGCCGAAACACAAGTGCAGGACCAGCGCTTGAACCGGGTGTACAAG  >  NC_002947/959641‑959938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.