BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1754893 =	136 (1.460)	7 (0.080)	6/248	NT	5.3%	coding (260/342 nt)	PP_1557	hypothetical protein
*	?	NC_002947	1754919 =	114 (1.230)	7 (0.080)	6/248	NT	5.3%	coding (286/342 nt)	PP_1557	hypothetical protein

Only 100 of 143 total aligned reads displayed.

ACCACTGCAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCGTTGGGTTGTGCTGGGCTCCGGCGTTTCGTGCTG  >  NC_002947/1754770‑1755068

aCCACTGCAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTa                                                                                                                                                       <  2:969607/150‑1 (MQ=255)

aCCACTGCAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTa                                                                                                                                                       <  1:2304274/150‑1 (MQ=255)

aCCACTGCAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTa                                                                                                                                                       >  2:1590091/1‑150 (MQ=255)

  cACTGCAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACa                                                                                                                                                     >  2:987683/1‑150 (MQ=255)

       cAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCa                                                                                                                                                >  1:593971/1‑150 (MQ=255)

       cAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCa                                                                                                                                                <  2:2251088/150‑1 (MQ=255)

        aaTGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGATCTGGTGACCCAGCGCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAg                                                                                                                                               <  2:1303806/150‑1 (MQ=255)

         aTGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAgg                                                                                                                                              <  1:2051198/150‑1 (MQ=255)

         aTGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAgg                                                                                                                                              <  1:606205/150‑1 (MQ=255)

          tGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAggg                                                                                                                                             <  2:1201456/150‑1 (MQ=255)

          tGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAggg                                                                                                                                             <  2:883113/150‑1 (MQ=255)

            ccTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGGACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGaa                                                                                                                                           >  1:1417862/1‑150 (MQ=255)

            ccTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGaa                                                                                                                                           <  2:593971/150‑1 (MQ=255)

            ccTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGaa                                                                                                                                           <  1:1590091/150‑1 (MQ=255)

              tCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTa                                                                                                                                                       <  2:1167223/136‑1 (MQ=255)

              tCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTa                                                                                                                                                       >  1:1167223/1‑136 (MQ=255)

                 ggCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAAc                                                                                                                                      <  1:80973/150‑1 (MQ=255)

                   cTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACcg                                                                                                                                    >  1:764828/1‑150 (MQ=255)

                                  aaCCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCcggcgg                                                                                                                     <  1:2258857/150‑1 (MQ=255)

                                     cGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCac                                                                                                                  >  2:213444/1‑150 (MQ=255)

                                      ggCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGCAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAggg                                                                                                                                             <  1:1345368/122‑1 (MQ=255)

                                      ggCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAggg                                                                                                                                             >  2:1345368/1‑122 (MQ=255)

                                         gAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGGCTGCTGCTGCCGTGCGCTTTGCTGCAGATCGAGCAGATGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCaccaac                                                                                                              <  1:1117048/150‑1 (MQ=37)

                                             ccctggccctggATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCCGCTACGCATCCGGCGCGGCGCCGGCGGCACCAACcaca                                                                                                          >  2:789384/1‑150 (MQ=39)

                                              cctggccctggATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCacac                                                                                                         >  1:2203119/1‑150 (MQ=255)

                                                 ggccctggATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCgg                                                                                                      <  1:2054098/150‑1 (MQ=255)

                                                 ggccctggATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCgg                                                                                                      >  2:2196628/1‑150 (MQ=255)

                                                    cctggATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAg                                                                                                                                          <  1:903543/111‑1 (MQ=255)

                                                    cctggATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGa                                                                                                   >  2:1895444/1‑150 (MQ=255)

                                                     ctggATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGAc                                                                                                  <  1:987683/150‑1 (MQ=255)

                                                     ctggAGGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCgg                                                                                                      >  2:594731/1‑146 (MQ=255)

                                                        gATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACcg                                                                                                                                    <  2:1989231/113‑1 (MQ=255)

                                                        gATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCaccaac                                                                                                              >  2:1068232/1‑135 (MQ=255)

                                                        gATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCaccaac                                                                                                              <  1:1068232/135‑1 (MQ=255)

                                                        gATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGAc                                                                                                  <  1:1728535/147‑1 (MQ=255)

                                                        gATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGAc                                                                                                  >  2:1728535/1‑147 (MQ=255)

                                                        gATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTCGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGaa                                                                                                                                           >  2:114714/1‑106 (MQ=255)

                                                         aTGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAgg                                                                                              <  1:830832/150‑1 (MQ=255)

                                                          tGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAgg                                                                                              <  1:1286329/149‑1 (MQ=255)

                                                          tGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAgg                                                                                              >  2:1286329/1‑149 (MQ=255)

                                                             aCTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGa                                                                                          <  1:1895444/150‑1 (MQ=255)

                                                              cTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGaa                                                                                         <  1:213444/150‑1 (MQ=255)

                                                               tGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAg                                                                                        <  2:2252783/150‑1 (MQ=255)

                                                                 gTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCCAGCAGTTGCAGAACCCTCACGCCTCCGG‑‑CCCTGAGGCTACATATCAGGGAACCAACCGGCCCGGCCCCGCCGGCACCACCCACACCGGCGCCTAGGGGGCAggc                                                                                      >  2:2160525/1‑149 (MQ=255)

                                                                   cctagtccccggtgtggttggtgccgccggcgccgcgccggttgcttccctgatatgtaccctcaggcatccgggcctgaggctACATATCAGGGaa                                                                                                                                           >  2:360104‑M2/85‑97 (MQ=255)

                                                                   cctagtccccggtgtggttggtgccgccggcgccgcgccggttgcttccctgatatgtaccctcaggcatccgggcctgaggctACATATCAGGGaa                                                                                                                                           <  1:360104‑M2/13‑1 (MQ=255)

                                                                    aCCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GAATGCGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACAt                                                                                   <  2:81421/150‑1 (MQ=255)

                                                                      ccAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGa                                                                                 >  2:2029456/1‑150 (MQ=255)

                                                                      ccAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGa                                                                                 >  2:166977/1‑150 (MQ=255)

                                                                        aGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGc                                                                               >  2:2325570/1‑150 (MQ=255)

                                                                         gCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAAGCCCTCCGGGGACTAGGGGGAAGGACATGAGCa                                                                              >  1:1819474/1‑150 (MQ=255)

                                                                           tCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAAc                                                                            >  1:703461/1‑150 (MQ=255)

                                                                           tCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAAc                                                                            <  2:1438864/150‑1 (MQ=255)

                                                                             aGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGAc                                                                                     <  1:824554/139‑1 (MQ=255)

                                                                              gCCTGAAGCTGCAGGCCGCGACGCGGCGGATCGAGCAGTTGAAGAACGCTCAGGCATCCGG‑‑GCCGGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTa                                                                         <  2:745074/150‑1 (MQ=255)

                                                                               ccTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCac                                                                                                                  <  1:199422/108‑1 (MQ=255)

                                                                               ccTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCac                                                                                                                  >  2:199422/1‑108 (MQ=255)

                                                                               ccTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTag                                                                        >  1:2201305/1‑150 (MQ=255)

                                                                                  gAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGa                                                                                 <  1:134110/138‑1 (MQ=255)

                                                                                   aaGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGaa                                                                    <  2:764828/150‑1 (MQ=255)

                                                                                   aaGCCGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGACCCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGaa                                                                    <  1:2422934/150‑1 (MQ=255)

                                                                                    aGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTa                                                                                                                                                       >  2:373644/1‑66 (MQ=255)

                                                                                    aGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTa                                                                                                                                                       <  1:373644/66‑1 (MQ=255)

                                                                                     gCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACcgg                                                                                                                                   >  2:734434/1‑85 (MQ=255)

                                                                                     gCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGa                                                                                                   <  1:1633704/117‑1 (MQ=255)

                                                                                      cTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCggg                                                                                                     <  2:1566258/114‑1 (MQ=255)

                                                                                      cTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCggg                                                                                                     >  1:1566258/1‑114 (MQ=255)

                                                                                         tctgCCGCGTCGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGaa                                                                    >  1:808709/4‑144 (MQ=255)

                                                                                          aGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGCGGAAGGACATGAGCAACGTAGAGAAGTCGGCt                                                             <  1:1918777/150‑1 (MQ=255)

                                                                                             ccGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAg                                                                                                                                               <  1:1430012/65‑1 (MQ=255)

                                                                                               gcgACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATa                                                        >  2:1535011/1‑150 (MQ=255)

                                                                                                    gcgGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACctgc                                                   >  2:1088128/1‑150 (MQ=255)

                                                                                                      ggCAGATCGAGCAGTTGAAGAACCCACCCGCATCCGG‑‑GCCTGCGGCTGTACACGATGCAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACctgctg                                                 <  2:1880407/150‑1 (MQ=255)

                                                                                                       gCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACTGGCGCGGCGCCGGCGGCACCAACCACACCGGGGAGTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTgg                                                <  1:1134038/150‑1 (MQ=255)

                                                                                                              ttccctgatatgtAGCCTCAGGC‑‑CCGGATGCCTGAGGGTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAgg                                                                                              >  2:360104‑M1/14‑97 (MQ=255)

                                                                                                              gAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTg                                         >  1:1609384/1‑150 (MQ=255)

                                                                                                               aGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTgg                                        >  2:1037964/1‑150 (MQ=255)

                                                                                                               aGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTgg                                        <  1:226985/150‑1 (MQ=255)

                                                                                                                  aGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAACACCTGCTGGAGCACTggggg                                     >  1:2651/1‑149 (MQ=255)

                                                                                                                    ttGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCg                                   >  1:1157090/1‑150 (MQ=255)

                                                                                                                      gaagaaCCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTggg                                       <  2:2213714/144‑1 (MQ=255)

                                                                                                                      gaagaaCCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCGtt                                 <  1:1037964/150‑1 (MQ=255)

                                                                                                                      gaagaaCCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCGtt                                 <  2:1461363/150‑1 (MQ=255)

                                                                                                                             ccTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGAAGACGAGTCGGCTGAATACATGCTGGAGCACTGGGGTCGTTGGGTtgt                          >  1:2090021/1‑150 (MQ=255)

                                                                                                                               cctcaggcccggatgcctgagggtACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTCGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGCGCACTGGGGTCGTTGGGTtgt                          >  2:774357‑M2/25‑150 (MQ=255)

                                                                                                                               cctcaggcccggatgcctgaggctACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCacac                                                                                                         <  1:5749‑M2/47‑1 (MQ=255)

                                                                                                                               cctcaggcccggatgcctgaggctACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCacac                                                                                                         >  2:5749‑M2/25‑71 (MQ=255)

                                                                                                                                cAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCGTTGGGTTGTGCt                       <  2:1417862/150‑1 (MQ=255)

                                                                                                                                 aGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGa                                                                                      <  1:1463458/86‑1 (MQ=255)

                                                                                                                                  ggCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCGTTGGGTTGTGCTgg                     <  2:2201305/150‑1 (MQ=255)

                                                                                                                                  ggCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCGTTGGGTTGTGCTgg                     <  2:814920/150‑1 (MQ=255)

                                                                                                                                     aTCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCTTTGGGTTGTGCTGGGCt                  >  1:447050/1‑150 (MQ=255)

                                                                                                                                         gg‑‑gCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGaa                                                                    >  2:1055038/1‑96 (MQ=255)

                                                                                                                                         gg‑‑gCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGaa                                                                    <  1:1055038/96‑1 (MQ=255)

                                                                                                                                          g‑‑gCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCGTTGGGTTGTGCTGGGCTCCGGc             <  2:882411/150‑1 (MQ=255)

                                                                                                                                                 gAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCGTTGGGTTGTGCTGGGCTCCGGCGTTTc        >  2:2287722/1‑150 (MQ=255)

                                                                                                                                                   ggCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAACGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTTCGGTCGTTGGGTTGTGCTGGGCTCCGGCGTTTCGt      <  1:789384/150‑1 (MQ=255)

                                                                                                                                                    gCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGCTATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCGTTGGGTTGTGCTGGGCTCCGGCGTTTc        <  1:756422/147‑1 (MQ=255)

                                                                                                                                                    gCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCGTTGGGTTGTGCTGGGCTCCGGCGTTTCGtg     >  2:1061395/1‑150 (MQ=255)

                                                                                                                                                       aCATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCGTTGGGTTGTGCTGGGCTCCGGCGTTTCGtgctg  <  2:411841/150‑1 (MQ=255)

ACCACTGCAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCGTTGGGTTGTGCTGGGCTCCGGCGTTTCGTGCTG  >  NC_002947/1754770‑1755068

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.