New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 3292346100 (1.070)5 (0.060) 5/236 NT 5.4% coding (1587/3675 nt) PP_2893 hypothetical protein
?NC_002947 = 3292388 81 (0.920)coding (1629/3675 nt) PP_2893 hypothetical protein

Only 100 of 105 total aligned reads displayed.

GCAGGGCAAAACTGGACCCTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACAACGCCCAACGCGGTGTAGTCGA  >  NC_002947/3292239‑3292537
                                                                                                                                                     |                                                                                                                                                      
gcagggcaAAACTGGACCCTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCgg                                                                                                                                                        <  2:587086/150‑1 (MQ=255)
gcagggcaAAACTGGACCCTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCgg                                                                                                                                                        <  1:1898113/150‑1 (MQ=255)
    ggCAAAACTGGACCCTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGgtca                                                                                                                                                    <  2:1977005‑M2/150‑5 (MQ=255)
     gCAAAACTGGACCCTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAGGCCCGGgtcaa                                                                                                                                                   >  2:1333095‑M2/1‑145 (MQ=255)
      cAAAACTGGACCCTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACCGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGgtcaag                                                                                                                                                  >  1:1484701‑M2/1‑144 (MQ=255)
      aaaaacTGGACCCTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGgtcaag                                                                                                                                                  >  2:1649002‑M2/2‑144 (MQ=255)
       aaaaCTGGACCCTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGgtcaagg                                                                                                                                                 >  1:2425353‑M2/1‑143 (MQ=255)
       aaaaCTGGACCCTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGgtcaagg                                                                                                                                                 >  1:2408983‑M2/1‑143 (MQ=255)
       aaaaCTGGACCCTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGgtcaagg                                                                                                                                                 >  2:1650469‑M2/1‑143 (MQ=255)
       aaaaCTGGACCCTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTGGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGgtcaagg                                                                                                                                                 >  1:842560‑M2/1‑143 (MQ=255)
              gACCCTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCt                                                                                                                                          >  1:1080354/1‑150 (MQ=255)
                 ccTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGa                                                                                                                                       <  1:994716/150‑1 (MQ=255)
                 ccTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGa                                                                                                                                       <  2:2153606/150‑1 (MQ=255)
                  cTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGAt                                                                                                                                      <  1:758158/150‑1 (MQ=255)
                  cTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGAt                                                                                                                                      <  2:171858/150‑1 (MQ=255)
                  cTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGCGCCGGCTGGAt                                                                                                                                      <  2:1806880/150‑1 (MQ=255)
                   tGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGAAGATTGGAGCCGCGCCTGGCTGCGCCAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATg                                                                                                                                     >  1:2123963/1‑150 (MQ=255)
                       cacaCTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGAACTTGACTTGCCGCGGCTCTTGCTCCATGCACTGATGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGc                                                                                                                                 <  1:1226424/150‑1 (MQ=255)
                         cacTGGCCCTCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCTCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCg                                                                                                                               <  2:1307684/150‑1 (MQ=255)
                            tGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTg                                                                                                                                         <  2:1538599/137‑1 (MQ=255)
                            tGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTg                                                                                                                                         >  1:1538599/1‑137 (MQ=255)
                            tGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCa                                                                                                                            >  1:1323544/1‑150 (MQ=255)
                                cATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCtt                                                                                                                        >  2:2172949/1‑150 (MQ=255)
                                 aTCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTg                                                                                                                       >  1:998309/1‑150 (MQ=255)
                                     aGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAgg                                                                                                                   <  1:1465140/150‑1 (MQ=255)
                                      gCTGGGTGACAAACGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCCGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGc                                                                                                                  <  2:1323544/150‑1 (MQ=255)
                                        tGGGTGACACCCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGccc                                                                                                                <  1:488252/150‑1 (MQ=255)
                                           gTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGc                                                                                                             >  2:263147/1‑150 (MQ=255)
                                              aCAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAg                                                                                                          <  2:1423939/150‑1 (MQ=255)
                                                aaCCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGc                                                                                                                                           >  1:1468050/1‑115 (MQ=255)
                                                aaCCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGc                                                                                                                                           <  2:1468050/115‑1 (MQ=255)
                                                aaCCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCGGGGCCTGCAAGGt                                                                                                        <  2:1644245/150‑1 (MQ=255)
                                                 aCCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTa                                                                                                       >  2:292771/1‑150 (MQ=255)
                                                       tCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCa                                                                                                 >  2:7262/1‑150 (MQ=255)
                                                       tCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCCGCAAAAGGTCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCa                                                                                                 <  1:169826/150‑1 (MQ=255)
                                                         aaCGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCAcc                                                                                               <  2:572220/150‑1 (MQ=255)
                                                                 tGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAggg                                                                                       >  2:2299020/1‑150 (MQ=255)
                                                                     aGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑Ag                                                                                  <  2:2215134/150‑1 (MQ=255)
                                                                      gCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑Agc                                                                                 >  1:400280/1‑150 (MQ=255)
                                                                           cAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTg                                                                            <  2:572935/150‑1 (MQ=255)
                                                                            aaCAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGc                                                                                           >  1:29307/1‑135 (MQ=255)
                                                                            aaCAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGc                                                                                           <  2:29307/135‑1 (MQ=255)
                                                                            aaCAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTgg                                                                           >  2:1443352/1‑150 (MQ=255)
                                                                            aaCAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTgg                                                                           >  1:1544114/1‑150 (MQ=255)
                                                                             aCAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAg                                                                                                          >  2:727995/1‑119 (MQ=255)
                                                                             aCAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAg                                                                                                          <  1:727995/119‑1 (MQ=255)
                                                                              cAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGcc                                                                         >  1:2352445/1‑150 (MQ=255)
                                                                               aGCTCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGccc                                                                        >  2:1522980/1‑150 (MQ=255)
                                                                                 cgcCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAg                                                                      <  1:1522980/150‑1 (MQ=255)
                                                                                  gcCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAgg                                                                     >  2:1609708/1‑150 (MQ=255)
                                                                                  gcCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGCCCGAGGCTACAAGGCCGGGTCAAGGGCCGGGTGGATGTCGCCGGCACCTTGCCGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAgg                                                                     <  2:1230429/150‑1 (MQ=255)
                                                                                   ccTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGc                                                                    <  1:1609708/150‑1 (MQ=255)
                                                                                    ctggctggGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGcc                                                                   >  2:1895972/1‑150 (MQ=255)
                                                                                    ctggctggGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGcc                                                                   >  1:253435/1‑150 (MQ=255)
                                                                                    ctggctggGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGcc                                                                   >  1:1143232/1‑150 (MQ=255)
                                                                                     tggctggGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCCAAGCGC‑TGGccctgcagg                                                                  <  1:2315251/150‑7 (MQ=255)
                                                                                           ggCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAAcc                                                            <  1:2172949/150‑1 (MQ=255)
                                                                                              gAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGcc                                                         >  1:1998631/1‑150 (MQ=255)
                                                                                                 tCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGgtcaaggtcgattcgcccggccaggcgctgttgcaagctgccactgccgttgatgcggttgtcacccagctggatggccagtgtgcccagggtccag                                                       <  1:2227050‑M2/150‑98 (MQ=255)
                                                                                                     ccTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTgcagca                                                  <  2:365113/150‑1 (MQ=255)
                                                                                                      cTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGgtcaaggtcgattcgcccagccaggcgctgttgcaagctgccactgccgttgatgcggttgtcacccagctggatggccagtgtgcccagggtccagttttg                                                  <  2:2321766‑M2/150‑103 (MQ=255)
                                                                                                       ttGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGt                                                >  1:201297/1‑150 (MQ=255)
                                                                                                           cTTGCCGCGCCTAGGCCAGCGGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGa                                            <  2:345332/150‑1 (MQ=255)
                                                                                                                cgcgCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTgg                                       <  2:1620292/150‑1 (MQ=255)
                                                                                                                 gcgcCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGa                                      <  1:263147/150‑1 (MQ=255)
                                                                                                                 gcgcCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGa                                      <  1:2005479/150‑1 (MQ=255)
                                                                                                                     cTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTgg                                       >  1:1652073/1‑145 (MQ=255)
                                                                                                                     cTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTgg                                       <  2:1652073/145‑1 (MQ=255)
                                                                                                                     cTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGAt                                     <  2:1519229/147‑1 (MQ=255)
                                                                                                                     cTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGAt                                     >  1:1519229/1‑147 (MQ=255)
                                                                                                                      tCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGgtcaaggtcgattcgcccagccaggcgctgttgcaagctgccactgccgttgatgcggttgtcacccagctg                                                                                <  1:1873919‑M2/104‑73 (MQ=255)
                                                                                                                      tCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGgtcaaggtcgattcgcccagccaggcgctgttgcaagctgccactgccgttgatgcggttgtcacccagctg                                                                                >  2:1873919‑M2/1‑32 (MQ=255)
                                                                                                                         gCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGcc                              <  2:1544114/150‑1 (MQ=255)
                                                                                                                          ccAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCt                             >  1:805920/1‑150 (MQ=255)
                                                                                                                          ccAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCt                             >  1:2152375/1‑150 (MQ=255)
                                                                                                                             gCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGa                          <  1:1895972/150‑1 (MQ=255)
                                                                                                                                gtgGCCGAGGCTACAAGGCCGGGTCAAGGGCAGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACaa                       <  2:1143232/150‑1 (MQ=255)
                                                                                                                                 tgGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTTGATGCCCGCCTGGACAAc                      <  2:1080354/150‑1 (MQ=255)
                                                                                                                                    ccGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACAACGcc                   >  2:152062/1‑150 (MQ=255)
                                                                                                                                    ccGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACAACGcc                   <  2:457566/150‑1 (MQ=255)
                                                                                                                                        ggCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACAACGCCCCAc               <  1:2005437/150‑1 (MQ=255)
                                                                                                                                           tACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGtt                                               >  1:120611/1‑115 (MQ=255)
                                                                                                                                           tACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGtt                                               <  2:120611/115‑1 (MQ=255)
                                                                                                                                           tACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACAACGCCCAAcgcg            >  2:1041859/1‑150 (MQ=255)
                                                                                                                                           tACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGACCCAGGCCGAAAACCGCCTGCAGCCGTTGGACCTGGATGCCCTCCTGGACAACGCCCAAcacg            >  2:55619/1‑150 (MQ=255)
                                                                                                                                            aCAAGGCCGGgtcaaggtcgattcgcccggccaggcgctgttgcaagctgccactgccgttgatgcggttgtcacccagctggatggccagtgtgcccagggtccagttttgccctgccccctgggtctcggccttgagcatggctggct            >  2:2227050‑M2/1‑10 (MQ=255)
                                                                                                                                            aCAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACAACGCCCAACGCgg           >  1:2001131/1‑150 (MQ=255)
                                                                                                                                             cAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCtt                                                                             >  2:1160424/1‑83 (MQ=255)
                                                                                                                                             cAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCtt                                                                             <  1:1160424/83‑1 (MQ=255)
                                                                                                                                             cAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACAACGCCCAACGCGgt          <  2:2152375/150‑1 (MQ=255)
                                                                                                                                             cAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACAACGCCCAACGCGgt          <  1:833181/150‑1 (MQ=255)
                                                                                                                                              aaGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACAACGCCCAACGCgg           >  2:2243991/1‑148 (MQ=255)
                                                                                                                                              aaGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACAACGCCCAACGCgg           <  1:2243991/148‑1 (MQ=255)
                                                                                                                                                ggCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCACTTGGCCCAGGCCGAAGCCCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACAACGCCCAACGCGGTGTa       <  1:292771/150‑1 (MQ=255)
                                                                                                                                                 gCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGTATGCCCGCCTGGACAACGCCCAACGCGGTGTAg      <  1:2299020/150‑1 (MQ=255)
                                                                                                                                                 gCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACAACGCCCAACGCGGTGTAg      >  1:80272/1‑150 (MQ=255)
                                                                                                                                                  ccGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACAACGCCCAACGCGGTGTAGt     >  1:48950/1‑150 (MQ=255)
                                                                                                                                                   cGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACAACGCCCAACGCGGTGTAGTc    >  1:1976971/1‑150 (MQ=255)
                                                                                                                                                   cGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACAACGCCCAACGCGGTGTAGTc    <  2:1998631/150‑1 (MQ=255)
                                                                                                                                                     ggTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACAACGCCCAACGCGGTGTAGTCGa  <  1:17018/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
GCAGGGCAAAACTGGACCCTGGGCACACTGGCCATCCAGCTGGGTGACAACCGCATCAACGGCAGTGGCAGCTTGCAACAGCGCCTGGCTGGGCGAATCGACCTTGACTTGCCGCGCCTCGGCCAGCTGTGGCCGAGGCTACAAGGCCGGGTCAAGGGCCGGCTGGATGTCGCCGGCACCTTGCAGGCCCCGCAAGGTACGCTCACCCTGCAGGGCC‑AGCGCTTGGCCCAGGCCGAAAACCGCCTGCAGCAGTTGGACCTGGATGCCCGCCTGGACAACGCCCAACGCGGTGTAGTCGA  >  NC_002947/3292239‑3292537

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.