New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 486119765 (0.700)20 (0.270) 16/200 NT 28.2% intergenic (‑103/+134) ligA/PP_4275 DNA ligase/cell division protein ZipA
?NC_002947 = 4861238 50 (0.670)intergenic (‑144/+93) ligA/PP_4275 DNA ligase/cell division protein ZipA

Only 100 of 144 total aligned reads displayed.

TCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGGCGGTAG  >  NC_002947/4861091‑4861385
                                                                                                                                                   |                                                                                                                                                   
   tGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagc                                                                                                                                                <  1:1296039‑M2/150‑6 (MQ=255)
     ggATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgg                                                                                                                                              <  2:1346154‑M2/150‑8 (MQ=255)
     ggATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgg                                                                                                                                              >  2:358772‑M2/1‑143 (MQ=255)
     ggATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgg                                                                                                                                              >  1:545470‑M2/1‑143 (MQ=255)
     ggATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgg                                                                                                                                              >  1:1042189‑M2/1‑143 (MQ=255)
      gATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcggg                                                                                                                                             >  1:514456‑M2/1‑142 (MQ=255)
      gATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcggg                                                                                                                                             >  1:1346154‑M2/1‑142 (MQ=255)
      gATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCAACAAGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcggg                                                                                                                                             >  2:461834‑M2/1‑142 (MQ=255)
      aagcgctgacagatccagacgaaagagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccaGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCggg                                                                                                                                             >  1:2366176‑M1/77‑150 (MQ=255)
       aTTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGCTGATGTACCTGCAggagcgggt                                                                                                                                            <  2:1099867‑M2/150‑10 (MQ=255)
           gTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttac                                                                                                                                        >  2:239379‑M2/1‑137 (MQ=255)
                  ctTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaa                                                                                                                                 <  2:1168496‑M2/150‑21 (MQ=255)
                  ctTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTCCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaa                                                                                                                                 >  2:2277608‑M2/1‑130 (MQ=255)
                   ttGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcggg                                                                                                                                             >  1:2200267‑M2/1‑129 (MQ=255)
                   ttGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcggg                                                                                                                                             <  2:2200267‑M2/137‑9 (MQ=255)
                        aagcaaaAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAACCCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGcc                                                                                                                           <  2:939138/150‑1 (MQ=255)
                            aaaaGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTAACTGAACCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATACACTACTTCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGca                                                                                                                       >  1:1023248/1‑150 (MQ=38)
                             agagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGcggga                                                                                                                                            <  2:1201577‑M1/75‑2 (MQ=255)
                             agagcagcctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGt                                                                                                                                            >  1:1201577‑M1/54‑128 (MQ=255)
                             aaaGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGcac                                                                                                                      >  2:773319/1‑150 (MQ=255)
                              aaGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGcaca                                                                                                                     <  1:1168496/150‑1 (MQ=255)
                               agagCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAg                                                                                                                    <  2:746306/150‑1 (MQ=255)
                                    cctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCgg                                                                                                                                              >  2:2413287‑M1/47‑119 (MQ=255)
                                    cctgagggcgtgctggccggttcgggtatcgtcgttgcctgtgccgGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCgg                                                                                                                                              <  1:2413288‑M1/73‑1 (MQ=255)
                                      cTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGAAGTGGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAacga                                                                                                             <  1:500403/150‑1 (MQ=255)
                                                tgCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGa                                                                                                   >  1:1550631/1‑150 (MQ=255)
                                                      gggTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGc                                                                                             <  1:773319/150‑1 (MQ=255)
                                                                tgtCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGccc                                                                                   <  1:412349/150‑1 (MQ=255)
                                                                   cTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTCCCCGCGAAGAGCCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCa                                                                                <  1:1226875/150‑1 (MQ=255)
                                                                   cTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGTGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCa                                                                                <  2:160066/150‑1 (MQ=255)
                                                                     gTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAgg                                                                              >  2:2144156/1‑150 (MQ=255)
                                                                      ttGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcggg                                                                                                                                             >  2:250232‑M2/1‑78 (MQ=255)
                                                                               ccAGCCCCTTCGCGGGAACACCCGCTCCCACAAGGGCGTCACACGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCtttt                                                                    <  2:1308603/150‑2 (MQ=255)
                                                                                cAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGGTACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCg                                                                   >  1:391966/1‑150 (MQ=255)
                                                                                cAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCg                                                                   >  2:1931695/1‑150 (MQ=255)
                                                                                  GCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTc                                                                 <  1:471997‑M1/150‑1 (MQ=255)
                                                                                     TCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTgg                                                              <  2:1918023‑M1/150‑1 (MQ=255)
                                                                                             GGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCa                                                      <  1:89137‑M1/150‑1 (MQ=255)
                                                                                             GGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCa                                                      <  1:88352‑M1/150‑1 (MQ=255)
                                                                                                 AACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGt                                                        >  2:497017‑M1/1‑144 (MQ=255)
                                                                                                 AACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGt                                                        <  1:497128‑M1/144‑1 (MQ=255)
                                                                                                 AACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGt                                                        >  2:497128‑M1/1‑144 (MQ=255)
                                                                                                  aCCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacaccttgaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaat                                                 <  2:936192‑M2/150‑101 (MQ=255)
                                                                                                  aCCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaaga                                                                                                                               >  1:492146‑M2/1‑50 (MQ=255)
                                                                                                  ACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGCCTGGATCTGTCAGCGCt                                                 <  2:1802213‑M1/150‑1 (MQ=255)
                                                                                                   cccGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaatc                                                <  2:208472‑M2/150‑102 (MQ=255)
                                                                                                   cccGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgca                                                                                          <  2:1665319‑M2/108‑60 (MQ=255)
                                                                                                   cccGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgca                                                                                          >  1:1665319‑M2/1‑49 (MQ=255)
                                                                                                   CCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGc                                                                                                                  >  2:2325478‑M1/1‑84 (MQ=255)
                                                                                                   CCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGccc                                                                                   <  1:667917‑M1/115‑1 (MQ=255)
                                                                                                   CCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGccc                                                                                   >  2:667917‑M1/1‑115 (MQ=255)
                                                                                                   CCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGgct                                                                            >  2:246360‑M1/1‑122 (MQ=255)
                                                                                                   CCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGgct                                                                            <  1:246360‑M1/122‑1 (MQ=255)
                                                                                                    ccGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaatcc                                               <  2:1431089‑M2/150‑103 (MQ=255)
                                                                                                    ccGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaac                                                                                                               >  1:2256856‑M2/1‑48 (MQ=255)
                                                                                                    ccGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggccggcacaggcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaatcc                                               <  2:2108429‑M2/150‑103 (MQ=255)
                                                                                                    CCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTGAGACTGCTCTTTCGTCTGGATCTGTCAGCGCTTc                                               <  2:1247725‑M1/150‑1 (MQ=255)
                                                                                                    CCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTg                                                               <  1:985331‑M1/134‑1 (MQ=255)
                                                                                                    CCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTc                                               <  2:1650605‑M1/150‑1 (MQ=255)
                                                                                                    CCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGACACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTc                                               <  2:527936‑M1/150‑1 (MQ=255)
                                                                                                      GCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTg                                             <  2:27595‑M1/150‑1 (MQ=255)
                                                                                                       CTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTgg                                            >  1:1931695‑M1/1‑150 (MQ=255)
                                                                                                        TCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTggg                                           >  1:1293315‑M1/1‑150 (MQ=255)
                                                                                                          ccACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaaca                                                                                                              >  1:1416152‑M2/1‑42 (MQ=255)
                                                                                                          CCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTc                                                       <  1:2245582‑M1/136‑1 (MQ=255)
                                                                                                          CCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTc                                                       >  2:2245582‑M1/1‑136 (MQ=255)
                                                                                                          CCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAgc                                                    >  2:1444340‑M1/1‑139 (MQ=255)
                                                                                                          CCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAgc                                                    <  1:1444340‑M1/139‑1 (MQ=255)
                                                                                                          CCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGtt                                         <  2:29164‑M1/150‑1 (MQ=255)
                                                                                                           cacgAGGGCGTCACATGCCCTAGGGCGGTGATGCACATGAAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTa                                        <  1:972972/150‑1 (MQ=255)
                                                                                                           cacaAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTa                                        <  1:1918023/150‑1 (MQ=255)
                                                                                                           cacaAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGCGGCTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCAAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTa                                        >  1:1637429/1‑150 (MQ=255)
                                                                                                            acaAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGt                                                                  <  2:1022665/123‑1 (MQ=255)
                                                                                                            acaAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGt                                                                  >  1:1022665/1‑123 (MQ=255)
                                                                                                              aaGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTgg                                                              >  2:969376/1‑125 (MQ=255)
                                                                                                              aaGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTgg                                                              <  1:969376/125‑1 (MQ=255)
                                                                                                                 ggCGTCACATGCCCTAGGGCGGTGATGTACCTGTGggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaatcccatgaccgccgaa                                  <  2:2171155‑M2/150‑116 (MQ=255)
                                                                                                                   cGCCACATGCCCTCGGGCGGTGATGTACCAGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaatcccatgaccgccgaaac                                >  2:1761862‑M2/1‑33 (MQ=255)
                                                                                                                    gTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctctttt                                                                      >  1:2390385‑M2/1‑32 (MQ=255)
                                                                                                                    gTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcggg                                                                                                                                             <  2:982115‑M2/40‑9 (MQ=255)
                                                                                                                     tCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGgcg                              >  2:1065648/1‑150 (MQ=255)
                                                                                                                     tCACATGACCTAGGGCGGGGATGGACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGgcg                              >  2:1798807/1‑150 (MQ=255)
                                                                                                                          tGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCa                                                      >  2:1695558/1‑121 (MQ=255)
                                                                                                                          tGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCa                                                      <  1:1695558/121‑1 (MQ=255)
                                                                                                                              ctggggCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGAATCATGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTc                     >  1:1240835/4‑150 (MQ=39)
                                                                                                                              cTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCa                                                      >  2:222304/1‑117 (MQ=255)
                                                                                                                              cTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCa                                                      <  1:222304/117‑1 (MQ=255)
                                                                                                                                aGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATAccc                                                                                                     <  2:1294811/68‑1 (MQ=255)
                                                                                                                                aGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATAccc                                                                                                     >  1:1294811/1‑68 (MQ=255)
                                                                                                                                 gggCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTcgac                  <  2:581008/150‑1 (MQ=255)
                                                                                                                                        gATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGc           >  2:463735/1‑150 (MQ=255)
                                                                                                                                           gTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACTCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTgg        >  1:167872/1‑150 (MQ=255)
                                                                                                                                             aCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGGAAATGTTGTGCTTTATTCTGTCAGCGCTTATGGGTTCGCCCACGGCGCGCGAACTCGACGATACGCTGGCg      >  1:1862079/1‑150 (MQ=25)
                                                                                                                                             aCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGGCg      >  1:756914/1‑150 (MQ=255)
                                                                                                                                              ccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTcga                   >  1:2180683/1‑136 (MQ=255)
                                                                                                                                              ccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGGCgg     >  2:1015160/1‑150 (MQ=255)
                                                                                                                                              ccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGGCgg     <  1:1798807/150‑1 (MQ=255)
                                                                                                                                                tGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGGCGGTa   <  1:1536932/150‑1 (MQ=255)
                                                                                                                                                 gTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCGGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGGCGGTAg  <  1:286326/150‑1 (MQ=255)
                                                                                                                                                 gTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCAGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCCGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGGCGGTAg  <  2:1261848/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGGCGGTAG  >  NC_002947/4861091‑4861385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.