New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 551331571 (0.760)11 (0.150) 11/198 NT 15.8% intergenic (+45/‑109) urtD/urtE ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
?NC_002947 = 5513371 61 (0.830)intergenic (+101/‑53) urtD/urtE ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein

GGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGC  >  NC_002947/5513225‑5513520
                                                                                                                                                  |                                                                                                                                                       
ggTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTtta                                                                                                                                                      >  2:2152496‑M2/1‑147 (MQ=255)
 gTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttac                                                                                                                                                     >  1:307221‑M2/1‑146 (MQ=255)
  tGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacc                                                                                                                                                    >  1:1247476‑M2/1‑145 (MQ=255)
  tGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacc                                                                                                                                                    >  2:1619072‑M2/1‑145 (MQ=255)
        cagATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaa                                                                                                                                              >  2:2312412‑M2/1‑139 (MQ=255)
           aTGAGCGGGTGGTCGAGGTGTCTCGGGGGCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGGGCGGGTttacccgcgaagag                                                                                                                                           >  2:1207819‑M2/1‑136 (MQ=255)
               gCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccg                                                                                                                                       <  1:2163372‑M2/150‑19 (MQ=255)
                  ggtggtCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTCCCAGTCGTAGGAGCGGGTttacccgcgaagaggccggca                                                                                                                                    >  2:976729‑M2/1‑129 (MQ=255)
                       tCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgcagaggccggcacaggc                                                                                                                               <  2:1564728‑M2/150‑27 (MQ=255)
                          aGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTCATGCCATGGGGCGGTTCACGTCGTAGGAGCGGGGTTACGCGCGAAGAGGCCggcacaggcaca                                                                                                                           >  1:15831/1‑150 (MQ=255)
                          aGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggca                                                                                                                                    >  2:1914772‑M2/1‑121 (MQ=255)
                          aGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggca                                                                                                                                    <  1:1914772‑M2/142‑22 (MQ=255)
                           ggTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGgcacaggcacag                                                                                                                          <  2:1827177/150‑1 (MQ=255)
                                 tCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTAAAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATccc                                                                                                                    >  2:206273/1‑150 (MQ=255)
                                 tCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGGAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATccc                                                                                                                    >  1:1078344/1‑150 (MQ=255)
                                   tGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacc                                                                                                                                                    <  2:866318‑M2/117‑6 (MQ=255)
                                   tGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacc                                                                                                                                                    >  1:866318‑M2/1‑112 (MQ=255)
                                        cGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAgg                                                                                                             <  2:1870506/150‑1 (MQ=255)
                                          cTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGaa                                                                                                           <  1:1386214/150‑1 (MQ=255)
                                               cGGATTTGAATTCTGGAGGTCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTAGTGTGGGTTTCATACTAATTTTTTGTTCCCGTCGGATGAGCGGGTTTCACCGAGTACCAACCTGCTCATTCACAGCATCCCTTTCAGGAACtctc                                                                                                      <  1:2388843/150‑1 (MQ=255)
                                                 gATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCACCGGTGTTTTCCCGTCGTAGGCGCGGGTACCGGGCGACGTGGCGTTACACAGGCACAGCATCCCTTTCAGGAACTCTcac                                                                                                    >  1:1741160/1‑150 (MQ=255)
                                                 gATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCCTAAGTACAGTGAGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTGTcac                                                                                                    >  1:1240033/1‑150 (MQ=38)
                                                    ttGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATg                                                                                                <  1:1492093/150‑1 (MQ=255)
                                                    ttGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATg                                                                                                <  1:1491542/150‑1 (MQ=255)
                                                           tttGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGa                                                                                         <  1:1323468/150‑1 (MQ=255)
                                                                 gcCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATTCCATGGGGCGGTTCCCGTTGTAGGAGCGGGATAAACCGCGAAGAGGCCGGCACAGGCTCAGCATCCCTTTCAGAAACTCTCACATGCTCAAGATctagc                                                                                   >  2:378871/1‑146 (MQ=38)
                                                                 gcCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccg                                                                                                                                       >  2:883069‑M2/1‑82 (MQ=255)
                                                                 gcCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccg                                                                                                                                       <  1:883069‑M2/100‑19 (MQ=255)
                                                                 gcCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGaca                                                                                   >  2:1419676/1‑150 (MQ=255)
                                                                   cTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACAcc                                                                                 >  1:579812/1‑150 (MQ=255)
                                                                   cTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACAcc                                                                                 >  2:777196/1‑150 (MQ=255)
                                                                   cTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACAcc                                                                                 >  1:286371/1‑150 (MQ=255)
                                                                        ccGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCa                                                                            <  2:1952243/150‑1 (MQ=255)
                                                                         cGGCCTCTTCGCGGGTAACCCCGTTCCTGCAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCAc                                                                           >  1:2106908/1‑150 (MQ=255)
                                                                         cGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCAc                                                                           >  1:506939/1‑150 (MQ=255)
                                                                         cGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCAc                                                                           <  2:579812/150‑1 (MQ=255)
                                                                         cGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAACGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCAAATCGACTAGCATACACATGCTCAAGATCGACACCCTGCAc                                                                           >  2:1378933/1‑150 (MQ=37)
                                                                          ggCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGCTCTCCCTCGAAGAGGCCGGCACCAACACCGCTTTCCTCGCATGAACTCTCACATGCTCAAGATCGACACCCTGCAcc                                                                          >  1:1116390/1‑150 (MQ=255)
                                                                           gCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATc                                                                                       <  2:1012062/136‑1 (MQ=255)
                                                                           gCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATc                                                                                       >  1:1012062/1‑136 (MQ=255)
                                                                            ccTCTTCGCGGGTAACCCCGTTCCTGCAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAg                                                                        <  2:2106908/150‑1 (MQ=255)
                                                                            ccTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAg                                                                        <  1:777196/150‑1 (MQ=255)
                                                                             ctctTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacacctcgaccacccgctcat                                                                         <  2:2047731‑M2/150‑81 (MQ=255)
                                                                             ctctTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGt                                                                       >  2:92623/1‑150 (MQ=255)
                                                                              tctTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGta                                                                      >  1:717113/1‑150 (MQ=255)
                                                                                ttCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCggcacaggcaca                                                                                                                           <  2:512720/96‑1 (MQ=255)
                                                                                ttCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCggcacaggcaca                                                                                                                           >  1:512720/1‑96 (MQ=255)
                                                                                ttCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGtact                                                                    >  1:16237/1‑150 (MQ=255)
                                                                                ttCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCATTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGtact                                                                    >  2:2187273/1‑150 (MQ=255)
                                                                                  cgcgGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacacctcgaccacccgctcatctgcc                                                                    >  1:2047731‑M2/1‑65 (MQ=255)
                                                                                       gTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggcacaggcgccaaaaattcaaatccg                                                                                                             >  1:2443564‑M2/1‑60 (MQ=255)
                                                                                       gTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggcacaggcgccaaaaattcaaatccg                                                                                                             <  2:2443564‑M2/104‑45 (MQ=255)
                                                                                         aaCCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCa                                                           <  2:286371/150‑1 (MQ=255)
                                                                                           ccccGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCATTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGc                                                         <  1:2187273/150‑1 (MQ=255)
                                                                                            cccGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTAcggc                                                               <  2:2004698/143‑1 (MQ=255)
                                                                                            cccGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTAcggc                                                               >  1:2004698/1‑143 (MQ=255)
                                                                                            cccGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGcc                                                        >  1:1285198/1‑150 (MQ=255)
                                                                                              cGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacacctcgaccacccgctcatctgcctgcacctgctcc                                                        <  1:263169‑M2/150‑98 (MQ=255)
                                                                                               gTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTtacccgcgaagaggccggcacaggcgccaaaaatt                                                                                                                      <  2:1765150‑M2/87‑36 (MQ=255)
                                                                                               gTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTtacccgcgaagaggccggcacaggcgccaaaaatt                                                                                                                      >  1:1765150‑M2/1‑52 (MQ=255)
                                                                                                ttCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggcacaggcaccaaaaattcaaatccggtcagcggcccagatacacctcgaccacccgctcatctgcctgcacctgctccag                                                      <  1:2305026‑M2/150‑100 (MQ=255)
                                                                                                    tACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTAcggc                                                               >  1:1931358/1‑135 (MQ=255)
                                                                                                    tACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTAcggc                                                               <  2:1931358/135‑1 (MQ=255)
                                                                                                    tACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTg                                                >  1:2095303/1‑150 (MQ=255)
                                                                                                       aGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTg                                                                              <  2:34906/117‑1 (MQ=255)
                                                                                                       aGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTg                                                                              >  1:34906/1‑117 (MQ=255)
                                                                                                         tGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCgg                                           >  1:2306768/1‑150 (MQ=255)
                                                                                                                   gCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTc                                 <  2:2306768/150‑1 (MQ=255)
                                                                                                                   gCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTGCAGTTGGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTc                                 >  1:1332333/1‑150 (MQ=38)
                                                                                                                    ccATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggcacaggcgccaaaaattcaaatcaggccggcggcccagatacacctcgcccgtccgctcatctccccgcacctgctccagcgagccttccgccagcacac                                  <  1:1740331‑M2/150‑120 (MQ=255)
                                                                                                                    ccATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCATGAACTCTCACATGCt                                                                                              >  1:167427/1‑88 (MQ=255)
                                                                                                                    ccATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCt                                                                                              <  2:167427/88‑1 (MQ=255)
                                                                                                                      aTGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGaa                              >  2:700098/1‑150 (MQ=255)
                                                                                                                       tGGGGCGGTTGCCGGAGTAGGGGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAg                             <  2:15831/150‑1 (MQ=255)
                                                                                                                         gggCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggcacaggcaccaaaaattcaaatccggtcagcggcccagatacacctcgaccacccgctcatctgcctgcacctgctccagcgagccttccgccagcacactcccc                             >  2:2305026‑M2/1‑26 (MQ=255)
                                                                                                                                 cccGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCgg                   <  2:1285198/150‑1 (MQ=255)
                                                                                                                                  ccGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGc                  >  2:1769605/1‑150 (MQ=255)
                                                                                                                                   cgtcgtAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCg                 >  1:2051616/1‑150 (MQ=255)
                                                                                                                                     tcgtAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGaa               >  2:176125/1‑150 (MQ=255)
                                                                                                                                     tcgtAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGaa               >  2:176404/1‑150 (MQ=255)
                                                                                                                                     tcgtAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGaa               <  2:506939/150‑1 (MQ=255)
                                                                                                                                     tcgtAGGAGCCGGGTCACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGaa               <  1:1564728/150‑1 (MQ=255)
                                                                                                                                      cgtAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAg              <  1:1419676/150‑1 (MQ=255)
                                                                                                                                      cgtAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAg              <  2:717113/150‑1 (MQ=255)
                                                                                                                                         aGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGa           <  1:92623/150‑1 (MQ=255)
                                                                                                                                          ttcgCGGGTAAACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTgcgc                                             <  2:2440659/112‑1 (MQ=255)
                                                                                                                                          ttcgCGGGTAAACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTgcgc                                             >  1:2440659/4‑115 (MQ=255)
                                                                                                                                          ggggCGGGTGTACCCGGGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCTCATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGAc          <  1:378871/147‑1 (MQ=255)
                                                                                                                                            aGCGGGTttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacacctcgaccacaaagccagctgcctgcacctgctccagcgagccttccgccagcacactcccctggtgcagcacggtcacat          <  1:148416‑M2/150‑144 (MQ=255)
                                                                                                                                             gCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGta                                                                      <  2:1708409/87‑1 (MQ=255)
                                                                                                                                             gCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGta                                                                      >  1:1708409/1‑87 (MQ=255)
                                                                                                                                               gggTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGAcctgcc     >  2:2044996/1‑150 (MQ=255)
                                                                                                                                                  tttACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACctgcctgc  >  2:2382875/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                       
GGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGCAGCCACATCCTGCGCGGCCTGTCCTTCGAAGCCAAGATCGGCGAAGTGACCTGCCTGC  >  NC_002947/5513225‑5513520

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.