New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6000959 =72 (0.770)5 (0.070) 5/190 NT 10.8% intergenic (+10/+99) PP_5256/amaA cyclic nucleotide‑binding protein/L‑pipecolate oxidase
?NC_002947 6001053 = 28 (0.390)intergenic (+104/+5) PP_5256/amaA cyclic nucleotide‑binding protein/L‑pipecolate oxidase

GCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCAGGAA  >  NC_002947/6000905‑6001201
                                                                                                                                                    |                                                                                                                                                    
gCTTCGATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAg                                                                                                                                                     >  1:1407335/1‑150 (MQ=255)
  ttCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTCTGGCAACGGGTTTACCCGCGAAGAGGCCAGTa                                                                                                                                                   <  1:663806/150‑1 (MQ=255)
      atcaaGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTGTTCGCGGGTAAACGCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTa                                                                                                                                               <  2:1296800/150‑1 (MQ=255)
      atcaaGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTa                                                                                                                                               >  2:1005022/1‑150 (MQ=255)
         aagaagGGTGGCTTCCTGAGTTGGTTGCACACGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGATGTCGTGTACCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTacaa                                                                                                                                            <  1:1005022/150‑1 (MQ=38)
         aagaagGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTAAACCTGTAGGAGCGGGTTTCCCCGCGAAGAGGCCAGTACTTacaa                                                                                                                                            <  2:1612258/150‑1 (MQ=255)
              gggTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTacaacacaa                                                                                                                                       <  2:1055521/150‑1 (MQ=255)
               ggTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTacaacacaac                                                                                                                                      >  1:1847420/1‑150 (MQ=255)
                 tGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAAccc                                                                                                                                    <  2:751163/150‑1 (MQ=255)
                      tCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAgg                                                                                                                               <  1:2372103/150‑1 (MQ=255)
                          gAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACt                                                                                                                           >  2:2188130/1‑150 (MQ=255)
                               ggttgCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTAAGGCACTGcccc                                                                                                                      >  1:502913/1‑150 (MQ=255)
                                    cacaAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTg                                                                                                                 <  1:1673559/150‑1 (MQ=255)
                                     acaAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTgg                                                                                                                >  1:2073225/1‑150 (MQ=255)
                                       aaGTGAGCCTGTGCCGGCCTCTTCGCGGGTACACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTGGCTTGCGAAGAGGCCAGTACTTACAACACAACCCTCAGCCACTGCCCCGCGTGGTa                                                                                                              <  1:54460/150‑1 (MQ=39)
                                                  tgCCGGCCTCTTCGCGGGTGAACCCGCTGCTACAAGTAGTGCACCGTCTGATAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAAc                                                                                                   <  2:956515/150‑1 (MQ=255)
                                                      GGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGa                                                                                               >  2:1847420‑M1/1‑150 (MQ=255)
                                                        CCTCTTCGCGGGTAACCCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACt                                                                                             >  2:1809986‑M1/1‑150 (MQ=255)
                                                          TCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCa                                                                                           <  1:1560774‑M1/150‑1 (MQ=255)
                                                                 gggtaaacccgctcctacaggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACg                                                                                    >  2:942731‑M2/84‑150 (MQ=255)
                                                                        CCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGt                                                                                                                                                    <  2:1838375‑M1/79‑1 (MQ=255)
                                                                        CCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGt                                                                                                                                                    >  1:1838375‑M1/1‑79 (MQ=255)
                                                                        CCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCg                                                                             <  2:2249893‑M1/150‑1 (MQ=255)
                                                                         aCGCTCCTACAAGTAGTGCACCGCCGGAGAGGGCAGTGGCGAGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCCCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCGGTCCGc                                                                            <  2:528884‑M1/149‑1 (MQ=255)
                                                                         CCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCa                                                                                                                                                      >  2:2414042‑M1/1‑76 (MQ=255)
                                                                         CCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCa                                                                                                                                                      <  1:2414042‑M1/76‑1 (MQ=255)
                                                                         CCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTa                                                                                                              <  1:1322177‑M1/116‑1 (MQ=255)
                                                                         CCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTa                                                                                                              <  1:1321707‑M1/116‑1 (MQ=255)
                                                                         CCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTa                                                                                                              >  2:1322177‑M1/1‑116 (MQ=255)
                                                                         CCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTa                                                                                                              >  2:1321707‑M1/1‑116 (MQ=255)
                                                                         CCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGaa                                                                                      <  1:1656786‑M1/140‑1 (MQ=255)
                                                                         CCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGaa                                                                                      >  2:1656786‑M1/1‑140 (MQ=255)
                                                                         CCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGCTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGGACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGc                                                                            <  2:1257632‑M1/150‑1 (MQ=255)
                                                                          cgctcctacaggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCa                                                                           >  2:1676903‑M2/75‑150 (MQ=255)
                                                                               ctacaggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCt                                                                                  >  1:1699036‑M2/70‑138 (MQ=255)
                                                                               ctacaggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCt                                                                                  <  2:1699036‑M2/69‑1 (MQ=255)
                                                                               CTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGaa                                                                      <  1:1575959‑M1/150‑1 (MQ=255)
                                                                               CTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGaa                                                                      <  1:2057667‑M1/150‑1 (MQ=255)
                                                                               CTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGaa                                                                      <  1:1427466‑M1/150‑1 (MQ=255)
                                                                                TACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAg                                                                     <  2:781093‑M1/150‑1 (MQ=255)
                                                                                  CAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGgc                                                                   <  2:2235258‑M1/150‑1 (MQ=255)
                                                                                    ggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGAACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGgcgc                                                                 >  1:627810‑M2/65‑150 (MQ=255)
                                                                                           cACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATACAACGCTGTCCGCAGCGAAGGCGCGCTcaca                                                          <  2:1407335/150‑1 (MQ=255)
                                                                                            aCCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTacaa                                                                                                                                            <  2:1178550/67‑1 (MQ=255)
                                                                                            aCCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTacaa                                                                                                                                            >  1:1178550/1‑67 (MQ=255)
                                                                                            aCCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCg                                                                                                 >  1:1512182/1‑110 (MQ=255)
                                                                                            aCCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCg                                                                                                 <  2:1512182/110‑1 (MQ=255)
                                                                                              cGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCg                                                       >  2:1861363/1‑150 (MQ=255)
                                                                                               gCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTAAAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGc                                                      <  2:1679109/150‑1 (MQ=255)
                                                                                                ccTGAGAGGGCTGTACTGAAGCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCt                                                     >  2:2434698/1‑150 (MQ=255)
                                                                                                   gagaGGGCTGTGGTGAACCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACCACCCTCAGGCACTGCCCCCCGTCGCACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCAt                                                  >  2:673706/1‑150 (MQ=255)
                                                                                                           tgtgGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGaaa                                          >  1:1630101/1‑150 (MQ=255)
                                                                                                           tgtgGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGaaa                                          >  1:1258674/1‑150 (MQ=255)
                                                                                                            gtggtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGCGCACAGAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGaaaa                                         <  1:1356837/150‑1 (MQ=255)
                                                                                                               gtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGt                                                                                                                  <  1:1719673/74‑1 (MQ=255)
                                                                                                               gtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGt                                                                                                                  >  2:1719673/1‑74 (MQ=255)
                                                                                                                    ccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTAAAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCg                                 >  1:819777/1‑150 (MQ=255)
                                                                                                                     cTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCgg                                >  1:1141458/1‑150 (MQ=255)
                                                                                                                       gtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCa                              >  2:2374113‑M2/30‑150 (MQ=255)
                                                                                                                       gtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCa                              <  1:1676903‑M2/121‑1 (MQ=255)
                                                                                                                       gtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCa                              <  2:1141458‑M2/121‑1 (MQ=255)
                                                                                                                       gtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCa                              <  2:2057667‑M2/121‑1 (MQ=255)
                                                                                                                        taggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAg                             <  1:2235258‑M2/122‑1 (MQ=255)
                                                                                                                              cgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTc                       <  1:1184909‑M2/128‑1 (MQ=255)
                                                                                                                                ggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCg                     >  1:1094147‑M2/21‑150 (MQ=255)
                                                                                                                                ggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCg                     >  1:1030776‑M2/21‑150 (MQ=255)
                                                                                                                                 gtttgcccgcgaagaggccAGTACTTACAACACAACCCTAAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGc                    <  2:502913‑M2/131‑1 (MQ=255)
                                                                                                                                 gtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGc                    >  1:580247‑M2/20‑150 (MQ=255)
                                                                                                                                  tttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGcc                   <  2:1575959‑M2/132‑1 (MQ=255)
                                                                                                                                    tacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTc                 <  2:580247‑M2/134‑1 (MQ=255)
                                                                                                                                     acccgagaagaggccAGTACCTACAACACAACCCTCAGGCACTGCCCCCCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCg                <  2:819777‑M2/135‑1 (MQ=255)
                                                                                                                                       ccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGcc              >  1:1336190‑M2/14‑150 (MQ=255)
                                                                                                                                          cgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCtt           <  2:1258674‑M2/140‑1 (MQ=255)
                                                                                                                                                 gccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCAgg    >  1:1250756‑M2/4‑150 (MQ=255)
                                                                                                                                                 gccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCAgg    >  1:955808‑M2/4‑150 (MQ=255)
                                                                                                                                                   cAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCAGGaa  >  1:782468‑M2/2‑150 (MQ=255)
                                                                                                                                                    aGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGc                               <  2:1233567/120‑1 (MQ=255)
                                                                                                                                                    aGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGc                               >  1:1233567/1‑120 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCAGGAA  >  NC_002947/6000905‑6001201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.