BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,396,949	C→A	5.0%	L206M (CTG→ATG)	PP_3001 →	CAIB/BAIF family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,396,949	0	C	A	5.0%	320.2 / 3.2	99	L206M (CTG→ATG)	PP_3001	CAIB/BAIF family protein
Reads supporting (aligned to +/- strand): ref base C (45/49); new base A (3/2); total (48/51)
Fisher's exact test for biased strand distribution p-value = 6.72e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.17e-01

Only 100 of 103 total aligned reads displayed.

GCGTGCCGGGCGAGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGATCGCCGCCCAGGTC  >  NC_002947/3396800‑3397098

gCGTGCCGGGCGAGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACAccc                                                                                                                                                        >  1:2094733/1‑150 (MQ=255)

  gTGCCGGGCGAGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTg                                                                                                                                                      <  1:2203490/150‑1 (MQ=255)

  gTGCCGGGCGAGGCACCGCCGCTGATGCGTTTTTTCCTGCACCACATGTGCACCGTCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTg                                                                                                                                                      <  2:1205119/150‑1 (MQ=255)

    gCCGGGCGAGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGAATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGgt                                                                                                                                                    <  2:807574/150‑1 (MQ=255)

      cGGGCGAGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACCTGCACACCGGCGAAAATACGGTGGCGGGGAGCTAGGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGgtgt                                                                                                                                                  >  1:2125353/1‑150 (MQ=255)

          cGAGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCATATCGACATGGCGCTGTACGACACCAGGGTGTCgta                                                                                                                                              <  1:1373478/150‑3 (MQ=255)

          cGAGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGAt                                                                                                                                              <  1:1494917/150‑1 (MQ=255)

          cGAGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGAt                                                                                                                                              <  1:1810614/150‑1 (MQ=255)

           gAGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATg                                                                                                                                             >  1:1176927/1‑150 (MQ=255)

           gAGGCACCGAGGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATg                                                                                                                                             >  2:2436019/1‑150 (MQ=255)

            aGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATGAGGTCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGc                                                                                                                                            <  1:643432/150‑1 (MQ=255)

              gCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCAc                                                                                                                                          <  2:606128/150‑1 (MQ=255)

              gCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCAc                                                                                                                                          <  1:1834273/150‑1 (MQ=255)

                aCCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGa                                                                                                                                        >  1:1951428/1‑150 (MQ=255)

                  cgccgcTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAAt                                                                                                                                      >  2:2259539/1‑150 (MQ=255)

                      gctgctGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGAt                                                                                                                                              >  2:1784173/1‑138 (MQ=255)

                      gctgctGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGAt                                                                                                                                              <  1:1784173/138‑1 (MQ=255)

                          ctgcGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCTATCAATGCCGCTCTGGTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTg                                                                                                                              <  2:1252833/150‑1 (MQ=255)

                          ctgcGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTg                                                                                                                              >  2:2317595/1‑150 (MQ=255)

                           tgcGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTgg                                                                                                                                                     >  2:2111684/1‑126 (MQ=255)

                           tgcGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTgg                                                                                                                                                     <  1:2111684/126‑1 (MQ=255)

                           tgcGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGgtg                                                                                                                                                   <  2:2213354/128‑1 (MQ=255)

                           tgcGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGgtg                                                                                                                                                   >  1:2213354/1‑128 (MQ=255)

                           tgcGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGc                                                                                                                             >  2:161484/1‑150 (MQ=255)

                            gcGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCa                                                                                                                            >  2:1471636/1‑150 (MQ=255)

                              gTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAgt                                                                                                                          <  2:1547941/150‑1 (MQ=255)

                                aTTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAgtgt                                                                                                                        <  1:212012/150‑1 (MQ=255)

                                aTTTCCCTGCGAGCCATCCACACCGGCATCCACGCGGCGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAgtgt                                                                                                                        <  2:1130664/150‑1 (MQ=255)

                                 tttCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAgtg                                                                                                                         >  1:849512/1‑148 (MQ=255)

                                 tttCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAgtg                                                                                                                         <  2:849512/148‑1 (MQ=255)

                                            gACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTcc                                                                                                           >  1:117025/1‑150 (MQ=255)

                                              cATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCGGTACGACACCCTTGTGTTGATGCACGAATACGCGGTGCAGTGTGA‑CACGCTGTCCgg                                                                                                         <  2:710387/150‑1 (MQ=255)

                                               aTGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACGCCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGt                                                                                                        >  1:1330909/1‑150 (MQ=255)

                                               aTGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGt                                                                                                        >  1:249310/1‑150 (MQ=255)

                                                ggTACGCCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTg                                                                                                       <  2:1563968/149‑1 (MQ=255)

                                                 gTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATa                                                                                                                                     <  2:749506/120‑1 (MQ=255)

                                                 gTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATa                                                                                                                                     >  1:749506/1‑120 (MQ=255)

                                                  tACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCgg                                                                                                         <  1:946083/146‑1 (MQ=255)

                                                  tACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCgg                                                                                                         >  2:946083/1‑146 (MQ=255)

                                                   acacCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCa                                                                                                    <  2:205202/150‑1 (MQ=255)

                                                     cccGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACt                                                                                                  <  1:315828/149‑1 (MQ=255)

                                                     acCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACt                                                                                                  <  2:2331206/150‑1 (MQ=255)

                                                       cGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACtgt                                                                                                >  2:1110556/1‑150 (MQ=255)

                                                         gCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTgtgt                                                                                              <  1:2241031/150‑1 (MQ=255)

                                                         gCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCCACATGGCGCTGTACGACACCCTGGTGTCGATGCACCAATACGCGGTGCAGTGTTACCAAGAT‑TCCGGTGGCGCTgtgt                                                                                              >  2:177166/1‑150 (MQ=255)

                                                             ccACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGcc                                                                                          <  1:1110556/150‑1 (MQ=255)

                                                              cACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGccc                                                                                         <  2:1330909/150‑1 (MQ=255)

                                                              cACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTATGTTGccc                                                                                         <  2:956231/150‑1 (MQ=255)

                                                               aCGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGcccc                                                                                        >  1:187056/1‑150 (MQ=255)

                                                               aCGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGcccc                                                                                        >  2:893920/1‑150 (MQ=255)

                                                                        cggcgATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCg                                                                               <  1:893920/150‑1 (MQ=255)

                                                                          gcgATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCCCTGTGTTTCCCCAGCAGACCGGc                                                                             >  2:374722/1‑150 (MQ=255)

                                                                          gcgATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGc                                                                             >  2:373848/1‑150 (MQ=255)

                                                                          gcgATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGc                                                                             <  2:915959/150‑1 (MQ=255)

                                                                              tCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACg                                                                         >  2:1301230/1‑150 (MQ=255)

                                                                                aaTGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGAc                                                                       <  1:1761024/150‑1 (MQ=255)

                                                                                   gCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATg                                                                    <  1:161484/150‑1 (MQ=255)

                                                                                          tgctCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCt                                                             <  2:428157/150‑1 (MQ=255)

                                                                                              cGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGAc                                                         <  1:189700/150‑1 (MQ=255)

                                                                                               ggCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGAcc                                                        <  2:2125353/150‑1 (MQ=255)

                                                                                                gCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCCCCTCGcccc                                                       >  1:401879/1‑150 (MQ=255)

                                                                                                        aGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGc                                               <  2:187056/150‑1 (MQ=255)

                                                                                                         gCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCg                                              <  1:2023908/150‑1 (MQ=255)

                                                                                                         gCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCg                                              >  1:773428/1‑150 (MQ=255)

                                                                                                          cAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCgt                                             >  1:2143148/1‑150 (MQ=255)

                                                                                                           aGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCgtg                                            <  2:1620760/150‑1 (MQ=255)

                                                                                                           aGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCgtg                                            <  1:2259539/150‑1 (MQ=255)

                                                                                                                ccgtggccAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGt                                                    >  1:153279/1‑137 (MQ=255)

                                                                                                                ccgtggccAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGt                                                    <  2:153279/137‑1 (MQ=255)

                                                                                                                 cgtggccAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCTATGCACGAATACGCGGTGCAGTGTTA‑CCCGGTGGCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCcgc                                      <  1:1345178/150‑1 (MQ=255)

                                                                                                                 cgtggccAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCcgc                                      <  2:1576231/150‑1 (MQ=255)

                                                                                                                      ccAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCAc                                 >  1:1578596/1‑150 (MQ=255)

                                                                                                                      ccAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGCGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCAc                                 >  2:1413671/1‑150 (MQ=255)

                                                                                                                        aGCACATAGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCCGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGGTCCGCGCCACCg                               >  2:550568/1‑150 (MQ=255)

                                                                                                                         gCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGa                              >  2:2445670/1‑150 (MQ=255)

                                                                                                                           acaTCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACg                            <  2:2298116/150‑1 (MQ=255)

                                                                                                                           acaTCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACg                            >  2:318007/1‑150 (MQ=255)

                                                                                                                             aTCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGc                          >  2:2316664/1‑150 (MQ=255)

                                                                                                                             aTCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGc                          >  1:364141/1‑150 (MQ=255)

                                                                                                                             aTCGACATGGAGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACAAACCCACCTCCACCCTGTCCGGCCTCTTCCGCGCCAccgccgcc                          >  2:109691/1‑148 (MQ=255)

                                                                                                                                     ggCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGt                  <  1:2317595/150‑1 (MQ=255)

                                                                                                                                       cgcTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGa                <  2:698051/150‑1 (MQ=255)

                                                                                                                                        gcTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGAt               >  1:978891/1‑150 (MQ=255)

                                                                                                                                        gcTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGAt               <  2:117025/150‑1 (MQ=255)

                                                                                                                                        gcTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGAt               >  2:506466/1‑150 (MQ=255)

                                                                                                                                         cTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGt                                                                                                        <  1:2002962/60‑1 (MQ=255)

                                                                                                                                         cTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGt                                                                                                        >  2:2002962/1‑60 (MQ=255)

                                                                                                                                            tACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGtt                                          <  2:2348680/119‑1 (MQ=255)

                                                                                                                                            tACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGtt                                          >  1:2348680/1‑119 (MQ=255)

                                                                                                                                            atcGACACCAGGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGATcgcc           >  1:1910473/3‑150 (MQ=255)

                                                                                                                                             tcGACACCAGGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGATCGTCCACGACATGCCCACCTCGACCCTGAACGGCGCGTTCCGCGCCACCGACGGCCACCTGGTGACccccg          >  1:1981817/2‑150 (MQ=255)

                                                                                                                                             tcGACACCAGGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCgt                                             >  2:2076417/2‑115 (MQ=255)

                                                                                                                                             tcGACACCAGGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCgt                                             <  1:2076417/114‑1 (MQ=255)

                                                                                                                                             aCGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGATcgccg          <  2:2094733/150‑1 (MQ=255)

                                                                                                                                               gACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGATCgccgcc        >  1:1917156/1‑150 (MQ=255)

                                                                                                                                               gACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGATCgccgcc        >  1:2137996/1‑150 (MQ=255)

                                                                                                                                                  acCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGATCGCCGCCCAg     <  1:851400/150‑1 (MQ=255)

                                                                                                                                                    ccTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCTACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTTGTGATCGCCGCCCAGGt   >  2:893463/1‑150 (MQ=255)

                                                                                                                                                    ccTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGATCGCCGCCCAGGt   >  1:1509380/1‑150 (MQ=255)

                                                                                                                                                     cTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGATCGCCGCCCAGGTc  >  2:1924219/1‑150 (MQ=255)

GCGTGCCGGGCGAGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTA‑CACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGATCGCCGCCCAGGTC  >  NC_002947/3396800‑3397098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`