BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,492,831	C→G	5.7%	G472A (GGC→GCC) ‡	PP_3097 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,492,831	0	C	G	5.7%	324.3 / 9.6	105	G472A (GGC→GCC) ‡	PP_3097	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (47/52); new base G (3/3); total (50/55)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.05e-01

Only 100 of 108 total aligned reads displayed.

CTTGATGCCGTTGATCTGTTTGCGAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTAAGGCCGATA  >  NC_002947/3492683‑3492977

cTTGATGCCGTTGATCTGTTTGCGAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGcc                                                                                                                                                   >  2:542705/1‑150 (MQ=255)

   gATGCCGTTGATCTGTTTGCGAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCaa                                                                                                                                                <  1:526172/150‑1 (MQ=255)

   gATGCCGTTGATCTGTTTGCGAATGGCGGAGACATTGAGGAAGTTGTTTAGCATCAATAGCTCCAGCAGCACAGCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCaa                                                                                                                                                >  1:646631/1‑150 (MQ=255)

    aTGCCGTTGATCTGTTTGCGAATGGCGGAGACATTGCGGTAGTTGTACAGTGACAACAGCTCCAGCAGCACTTAGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAg                                                                                                                                               <  1:757740/150‑1 (MQ=255)

        cGTTGATCTGTTTGCGAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGca                                                                                                                                           <  2:1404575/150‑1 (MQ=255)

        cGTTGATCTGTTTGCGAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGca                                                                                                                                           >  2:14344/1‑150 (MQ=255)

          ttGATCTGTTTGCGAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGcaca                                                                                                                                         <  1:2011529/150‑1 (MQ=255)

             aTCTGTTTGCGAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAGTGGCACACGc                                                                                                                                      >  1:2203797/1‑150 (MQ=255)

                tGTTTGCGAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCAcc                                                                                                                                   >  1:247734/1‑150 (MQ=255)

                  tttGCGAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGAAAGAGATGGCTCAGCGACAGGTGGGCTATCAACCGCCAGATCAGGCCCTTGCCCAGGGGCACACGCACCGt                                                                                                                                 >  1:643760/1‑150 (MQ=255)

                        aaTGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGt                                                                                                                           <  1:1067798/150‑1 (MQ=255)

                        aaTGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGt                                                                                                                           <  2:646631/150‑1 (MQ=255)

                          tGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGGGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTgg                                                                                                                         <  2:1049367/150‑1 (MQ=255)

                           ggCGGAGCTATGGCGGTAGTTGCACGGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCGGACCAGCGACAGATGGTGCAGCGACCGGTGTGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTggg                                                                                                                        <  2:449353/150‑1 (MQ=255)

                           ggCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTggg                                                                                                                        <  2:1976857/150‑1 (MQ=255)

                            gCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTgggg                                                                                                                       >  2:1451623/1‑149 (MQ=255)

                              ggAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGGCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCtt                                                                                                                     <  2:327462/150‑1 (MQ=255)

                                   cATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGGCAGCTGGTACAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCgca                                                                                                                <  2:2019329/150‑1 (MQ=255)

                                   cATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCTCCGTTTCGGGGGGCTTGCgca                                                                                                                <  2:343793/150‑1 (MQ=255)

                                    aTTGCGGTAGTTGTGCAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCgcag                                                                                                               >  1:1182712/1‑150 (MQ=255)

                                    aTTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAgg                                                                                                                                              >  2:2316326/1‑119 (MQ=255)

                                    aTTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAgg                                                                                                                                              <  1:2316326/119‑1 (MQ=255)

                                    aTTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTgcgaag                                                                                                               >  2:92530/1‑147 (MQ=255)

                                    aTTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCgcag                                                                                                               >  2:2220182/1‑150 (MQ=255)

                                        cGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCgcaggcag                                                                                                           <  1:1259922/150‑1 (MQ=255)

                                         ggTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGTTTCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGc                                                                                                          >  1:1968187/1‑150 (MQ=255)

                                           tAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGc                                                                                                                                                    >  1:1436826/1‑106 (MQ=255)

                                           tAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGc                                                                                                                                                    <  2:1436826/106‑1 (MQ=255)

                                           tAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGAACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCgg                                                                                                        >  2:1652947/1‑150 (MQ=255)

                                             gTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGat                                                                                                      >  1:1280413/1‑150 (MQ=255)

                                               tGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGatat                                                                                                    >  2:180689/1‑150 (MQ=255)

                                               tGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGatat                                                                                                    <  1:2401491/150‑1 (MQ=255)

                                                 tACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATcc                                                                                                  >  2:1198712/1‑150 (MQ=255)

                                                  aCAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCt                                                                                                 <  1:180689/150‑1 (MQ=255)

                                                   cAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCtt                                                                                                <  1:2220182/150‑1 (MQ=255)

                                                   cAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCtt                                                                                                <  2:2150701/150‑1 (MQ=255)

                                                   cAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGAAGGCAGCGGATATCCtt                                                                                                <  1:92530/150‑1 (MQ=255)

                                                     gCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCTCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGa                                                                                              <  1:2068365/150‑1 (MQ=255)

                                                     gCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTGGa                                                                                              >  1:308139/1‑150 (MQ=255)

                                                     gCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGAACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGa                                                                                              <  1:1652947/150‑1 (MQ=255)

                                                       gACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATc                                                                                            <  2:1632285/150‑1 (MQ=255)

                                                         caacaGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATcc                                                                                                  >  1:588216/1‑142 (MQ=255)

                                                         caacaGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATcc                                                                                                  <  2:588216/142‑1 (MQ=255)

                                                         caacaGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCAc                                                                                          <  1:2114634/150‑1 (MQ=255)

                                                                  cagcagCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCTAGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGc                                                                                 >  1:524078/1‑150 (MQ=255)

                                                                  cagcagCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTggg                                                                                 >  2:1752036/1‑149 (MQ=255)

                                                                   agcagcACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCtt                                                                                                <  1:1291686/134‑1 (MQ=255)

                                                                   agcagcACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCtt                                                                                                >  2:1291686/1‑134 (MQ=255)

                                                                    gcagcaCTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCgg                                                                               >  1:602138/1‑150 (MQ=255)

                                                                       gcaCTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGaa                                                                            >  1:255607/1‑150 (MQ=255)

                                                                        caCTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCAcc                                                                                         <  1:1938470/136‑1 (MQ=255)

                                                                        caCTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCAcc                                                                                         >  2:1938470/1‑136 (MQ=255)

                                                                         aCTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATg                                                                          <  2:2283240/150‑1 (MQ=255)

                                                                          cTTCTCTGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGGGCAAGGGcctga                                                                                                                                        <  1:1475308/87‑5 (MQ=255)

                                                                          cTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGGGCAAGGGcctga                                                                                                                                        >  2:1475308/1‑83 (MQ=255)

                                                                           ttCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGGGCAAGGGcct                                                                                                                                          <  2:2451233/84‑3 (MQ=255)

                                                                           ttCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGGGCAAGGGcct                                                                                                                                          >  1:2451233/1‑82 (MQ=255)

                                                                           ttCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGt                                                                        >  2:83210/1‑150 (MQ=255)

                                                                               cgGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGaaa                                                                    >  1:1051573/1‑150 (MQ=255)

                                                                               cgGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGACCTTGCCCAAGGGAACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGaaa                                                                    <  1:542705/150‑1 (MQ=255)

                                                                                ggCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGaagt                                                                   >  1:835313/1‑148 (MQ=255)

                                                                                   ccTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGc                                                                <  1:1070695/150‑1 (MQ=255)

                                                                                    cTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAACCgat                                                               <  1:83210/150‑3 (MQ=255)

                                                                                     tGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGccc                                                              >  1:1900073/1‑150 (MQ=255)

                                                                                      ggCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATAACCGAGTTGGCgg                                                                               >  1:151333/1‑132 (MQ=255)

                                                                                          gACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTc                                                         <  2:12264/150‑1 (MQ=255)

                                                                                             cAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGa                                                                                       <  2:718475/117‑1 (MQ=255)

                                                                                             cAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGa                                                                                       >  1:718475/1‑117 (MQ=255)

                                                                                             cAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGcc                                                      >  1:487776/1‑150 (MQ=255)

                                                                                                    agagGGTTCAGGGACAGGGGGGCGATCAACCGCCAGATCAGGGCCTTGCCGAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTGGAGGACCGAGTTGGGGGGGATGGGGAAATCGCCCCGTTCGCCACCGAAc                                               <  1:1100574/150‑1 (MQ=255)

                                                                                                     gATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGt                                                                        >  1:298251/1‑124 (MQ=255)

                                                                                                     gATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGt                                                                        <  2:298251/124‑1 (MQ=255)

                                                                                                      aTGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACgg                                             <  1:14344/150‑1 (MQ=255)

                                                                                                      aTGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACgg                                             >  2:1875179/1‑150 (MQ=255)

                                                                                                       tGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGACCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGgc                                            >  2:1435465/1‑150 (MQ=255)

                                                                                                        ggTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGgca                                           <  2:602138/150‑1 (MQ=255)

                                                                                                                gACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGc                                   <  1:974800/150‑1 (MQ=255)

                                                                                                                gACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGc                                   >  2:2364455/1‑150 (MQ=255)

                                                                                                                gACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGc                                   <  1:1629376/150‑1 (MQ=255)

                                                                                                                 aCAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCg                                  >  2:216174/1‑150 (MQ=255)

                                                                                                                  cAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGa                                                                                              <  1:1699635/89‑1 (MQ=255)

                                                                                                                  cAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGa                                                                                              >  2:1699635/1‑89 (MQ=255)

                                                                                                                  cAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCgg                                 <  2:643760/150‑1 (MQ=255)

                                                                                                                     gTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGa                                                                                              <  2:2055490/86‑1 (MQ=255)

                                                                                                                     gTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGa                                                                                              >  1:2055490/1‑86 (MQ=255)

                                                                                                                       gggCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGt                            <  2:458320/150‑1 (MQ=255)

                                                                                                                       gggCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGt                            >  2:199408/1‑150 (MQ=255)

                                                                                                                        ggCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTc                           >  1:796989/1‑150 (MQ=255)

                                                                                                                        ggCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTc                           <  2:1581005/150‑1 (MQ=255)

                                                                                                                         gCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTcg                          >  1:614740/1‑150 (MQ=255)

                                                                                                                           gATCAACCGCCAGATGAGGCACTTACGCAAGGGAAGACGCACCGTGGCGGTGGGCTTGAGCAGGCAGCGGATAGCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTACCCACCGGACGTGGGCATAGGCGGCACGTcgcg                        >  2:556062/1‑150 (MQ=255)

                                                                                                                              cAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGtt                     <  2:247734/150‑1 (MQ=255)

                                                                                                                                 ccGCCAGATCAGGCCCTTGCCCAAGGGCACACGCGCCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGGTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTtgct                  <  2:308139/150‑1 (MQ=255)

                                                                                                                                 ccGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTtgct                  <  1:1198712/150‑1 (MQ=255)

                                                                                                                                   gCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTtgctgc                >  1:2344351/1‑150 (MQ=255)

                                                                                                                                          tgtgCCCTTGGGCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCa               >  1:95550/4‑144 (MQ=255)

                                                                                                                                          tgtgCCCTTGGGCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCa               <  2:95550/141‑1 (MQ=255)

                                                                                                                                             gCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTAAGGcc      >  2:2282056/1‑150 (MQ=255)

                                                                                                                                               ccTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTAAGGCCGa    >  1:711158/1‑150 (MQ=255)

                                                                                                                                                 ttGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTAAGGCCGATa  <  1:1875179/150‑1 (MQ=255)

CTTGATGCCGTTGATCTGTTTGCGAATGGCGGAGACATTGCGGTAGTTGTACAGCGACAACAGCTCCAGCAGCACTTCGCGGCCCTGGCTGACCAGCGACAGATGGTTCAGCGACAGGTGGGCGATCAACCGCCAGATCAGGCCCTTGCCCAAGGGCACACGCACCGTGGCGGTGGGCTTGCGCAGGCAGCGGATATCCTTGATCACCGAGTTGGCGGGAATGGTGAAATCGCCCCGTTCGCCACCGAACGGCAGCATCAGCGGCACGTCGCGGTTGCTGCAGGTAAGGCCGATA  >  NC_002947/3492683‑3492977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`