| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,645,945 | A→T | 10.1% | L32Q (CTG→CAG) | PP_3212 ← | Rieske 2Fe‑2S family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,645,945 | 0 | A | T | 10.1% | 322.5 / 23.4 | 109 | L32Q (CTG→CAG) | PP_3212 | Rieske 2Fe‑2S family protein |
| Reads supporting (aligned to +/- strand): ref base A (53/45); new base T (6/5); total (59/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.40e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
AGTCGTATTCCCAGCCGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCGGCTGCCGAC > NC_002947/3645796‑3646092 | aGTCGTATTCCCAGCCGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGGGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCca > 1:1346091/1‑150 (MQ=255) tCGTATTCCCAGCCGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGTGTACGATCGTGACGCTGCCACAACACCAGCGCTTCACCcaga > 2:1705947/1‑149 (MQ=255) tATTCCCAGCCGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAgg > 1:2272219/1‑150 (MQ=255) ccAGCCGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGaa < 2:1246548/150‑1 (MQ=255) cAGCCGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCTGCTGGGTGaag < 1:1765841/150‑2 (MQ=255) aGCCGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGATGTCTCCTTCGTTTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCTGCTGGGTGaagc < 2:664221/150‑3 (MQ=255) ccGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGc > 2:2332407/1‑150 (MQ=255) ccGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGc > 2:2332109/1‑150 (MQ=255) ccGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGc > 1:1622139/1‑150 (MQ=255) aTACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCGCGTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTggg < 1:1705947/150‑1 (MQ=255) aTACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTggg > 2:775324/1‑150 (MQ=255) atatTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAgg < 1:2136265/150‑1 (MQ=255) ttGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTgggg > 1:251700/1‑135 (MQ=255) ttGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTgggg < 2:251700/135‑1 (MQ=255) gCCCTCAGCACTGACGACTCCTCTGGAGAGTTTGGCGGGGCGGTGGCAGCAGCGGTCCCGCATTGCCACCAGTGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGt < 1:413044/150‑1 (MQ=255) gCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGt < 2:1291359/150‑1 (MQ=255) cACTGAGTAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGa < 2:1178032/150‑1 (MQ=255) cACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGa < 2:1122356/150‑1 (MQ=255) aCGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGAGGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAgg < 2:791391/150‑1 (MQ=255) aCGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAgg > 1:919194/1‑150 (MQ=255) aCGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAgg < 2:1677909/150‑1 (MQ=255) gAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGc > 1:1723206/1‑150 (MQ=255) gCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATa < 2:1622139/150‑1 (MQ=255) tttGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAGTGTCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCa > 1:1454368/1‑150 (MQ=255) tttGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTggg > 1:2285159/1‑111 (MQ=255) tttGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTggg < 2:2285159/111‑1 (MQ=255) tttGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCa > 2:1409792/1‑150 (MQ=255) gACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGaaa > 1:2135033/1‑150 (MQ=255) gACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGaaa > 2:599014/1‑150 (MQ=255) aCAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAAc > 2:1486254/1‑150 (MQ=255) ggtgcggtgGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGGTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATAc > 2:1373323/1‑150 (MQ=255) tgcggtgGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAg < 2:197580/150‑1 (MQ=255) gtgGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGgttg > 1:312121/1‑150 (MQ=255) ggCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGgttgtt < 1:2332407/150‑1 (MQ=255) ggCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGgttgtt < 1:2332109/150‑1 (MQ=255) cagcagCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGTGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTg < 2:129606/150‑1 (MQ=255) cagcagCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTg < 2:2272219/150‑1 (MQ=255) cagcagCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTg < 2:1346091/150‑1 (MQ=255) cagcagCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCAAAACACCTGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTg < 2:562773/150‑1 (MQ=255) agcagcGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTgg < 2:919194/150‑1 (MQ=255) gcagcGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAGTGGCTTGGGGCCGACTACGAGGGCTGTCATAGGGAGTAGGGCATACCAGACACGGCGCAATACAGGTTGTTTggg > 2:870564/1‑149 (MQ=255) cagcGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACgg < 2:2016968/129‑1 (MQ=255) cagcGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACgg > 1:2016968/1‑129 (MQ=255) gTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTg < 2:2116508/76‑1 (MQ=255) gTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTg > 1:2116508/1‑76 (MQ=255) gTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACa > 1:967822/1‑133 (MQ=255) ccGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAAATTGTTGGGAAAGGAACaa > 2:1356473/1‑149 (MQ=255) gCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGgcg < 2:672894/121‑1 (MQ=255) gCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATaa > 2:1891553/1‑150 (MQ=255) cATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAAt > 2:1083909/1‑150 (MQ=255) tGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAg < 1:1461674/150‑1 (MQ=255) ccACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGa > 1:742988/1‑150 (MQ=255) cACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAg > 2:1636624/1‑122 (MQ=255) cACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTATTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAg < 1:1636624/122‑1 (MQ=255) aCCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAg > 2:529478/1‑121 (MQ=255) aCCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAg < 1:529478/121‑1 (MQ=255) aCCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGAtt > 1:1654140/1‑150 (MQ=255) ccGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTc < 1:775324/150‑1 (MQ=255) tACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGttt > 2:2047609/1‑121 (MQ=255) tACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGttt < 1:2047609/121‑1 (MQ=255) ccATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGc > 1:447029/1‑150 (MQ=255) cATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCg > 1:561724/1‑150 (MQ=255) cATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCg < 1:1536336/150‑1 (MQ=255) cGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCtt < 1:1988229/150‑1 (MQ=255) ttCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAAc < 2:2419992/113‑1 (MQ=255) ttCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGtt > 1:2317032/1‑150 (MQ=255) ccACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTAt < 2:1723206/150‑1 (MQ=255) acaacaCCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAAc > 2:1613447/1‑113 (MQ=255) acaacaCCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAAc < 1:1613447/113‑1 (MQ=255) aacaCCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGgtg > 2:1568110/1‑150 (MQ=255) acCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGtt > 1:2382965/1‑132 (MQ=255) ccAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCa > 1:1515227/1‑150 (MQ=255) cAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGt > 1:2344336/1‑99 (MQ=255) cAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGt < 2:2344336/99‑1 (MQ=255) aagccattCACCCTGCTGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCGGAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAg > 1:1126979/7‑150 (MQ=255) aGCGCTTCACCCAGCAGGGTGAATGGCTTGTGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGc < 1:1568110/150‑1 (MQ=255) gcgcTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCg > 1:2223419/1‑150 (MQ=255) gcgcTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCg > 2:2085369/1‑150 (MQ=255) cgcTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTcaca > 2:1809595/1‑122 (MQ=255) cgcTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTCGGCTTTTTACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCgg < 1:1356473/150‑1 (MQ=255) ccattCACCCTGCTGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCCCCATAATCAGGATTCCt < 2:700618/115‑1 (MQ=255) ccattCACCCTGCTGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCt > 1:700618/4‑118 (MQ=255) cTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAg < 2:2346471/55‑1 (MQ=255) cTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAg > 1:2346471/1‑55 (MQ=255) attCACCCTGCTGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACa < 2:477497/101‑1 (MQ=255) attCACCCTGCTGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACa > 1:477497/2‑102 (MQ=255) attCACCCTGCTGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAg < 2:2024471/127‑1 (MQ=255) attCACCCTGCTGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAg > 1:2024471/2‑128 (MQ=255) attCACCCTGCTGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCGGCt > 2:2169854/2‑150 (MQ=255) attCACCCTGCTGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATGAGTCACAGCGTTGAGCTTGTTATGGTGTTCAGCGGCt > 2:2409630/2‑150 (MQ=255) ttCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATg > 1:617440/1‑136 (MQ=255) ttCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCGGCTg > 2:917255/1‑150 (MQ=255) aCCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCa < 1:1361278/104‑1 (MQ=255) aCCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCa > 2:1361278/1‑104 (MQ=255) cccAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCGGCTGCCGa > 2:2184775/1‑150 (MQ=255) cccAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCGGCTGCCGa > 1:1109021/1‑150 (MQ=255) ccAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAAc < 2:2140008/91‑1 (MQ=255) ccAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAAc > 1:2140008/1‑91 (MQ=255) ccAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCGGCTGCCGAc > 2:547348/1‑150 (MQ=255) ccAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCGGCTGCCGAc > 2:2287174/1‑150 (MQ=255) | AGTCGTATTCCCAGCCGTGATACCCGCAGGCGATATTGCCCTCAGCACTGACGAAGCCTTTGGACAGTTTGGCGGTGCGGTGGCAGCAGCGGTCCCGCATTGCCACCGGGGTACCATCGGGACGCTTCCACAACACCAGCGCTTCACCCAGCAGGGTGAATGGCTTGGGGCCGTCTTCGAGGGCTGTCATAGGGAGCAGGGCATACCAGAAACGGCGCAATACAGGTTGTTTGGTAACCAACATAATCAGGATTCCTCACAGCGTTGAGCTTGTTATGGTGTTCAGCGGCTGCCGAC > NC_002947/3645796‑3646092 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |