| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 325,161 | C→G | 9.8% | P149A (CCA→GCA) | oprQ → | outer‑membrane porin D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 325,161 | 0 | C | G | 9.8% | 252.2 / 16.2 | 82 | P149A (CCA→GCA) | oprQ | outer‑membrane porin D |
| Reads supporting (aligned to +/- strand): ref base C (35/39); new base G (4/4); total (39/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01 | |||||||||||
GTGGCGGCGTCGACTTCTTCAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGTGATGGTGGTGG > NC_002947/325012‑325309 | gtggCGGCGTCGACTTCTTCAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGACAGACGGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGc < 1:1637558/150‑1 (MQ=255) gcggcgTCGACTTCTTCAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGAGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAg < 2:368082/150‑1 (MQ=255) gTCGACTTCTTCAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGGCAGtgctg < 1:333841/150‑1 (MQ=255) tCGACTTCTTCAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGGCAGtgctgg < 2:1693061/150‑2 (MQ=255) cGACTTCTTCAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCa < 1:1170908/150‑1 (MQ=255) aCTTCTTCAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGt < 2:222458/150‑1 (MQ=255) ttcttcAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGGGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTac > 1:1727150/1‑150 (MQ=255) tcttcAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTacg < 2:909736/150‑1 (MQ=255) aaGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGc < 2:843917/130‑1 (MQ=255) aaGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGc > 1:843917/1‑130 (MQ=255) aaGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACAACGTGCTGAAGTACGGTGACCAGATTCCAGCAGTGCCAGCGCTGCAGTCCGCCGAt > 2:2230523/1‑150 (MQ=255) ccGCACGAACCCACCAATGCCGAAGGCACCCCCCCCACG‑TGCATATACATCGCCTGTGGTTGTGCTGCTGTGTAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCa < 1:1115801/150‑1 (MQ=255) ccGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCa < 2:85472/150‑1 (MQ=255) ccGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCa > 2:1588288/1‑150 (MQ=255) cGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGTGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTct < 2:717076/150‑1 (MQ=255) gAAACCACCAATGCCGAAGGCAACGCCTGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTctg < 2:1267784/150‑1 (MQ=255) gAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTctg > 2:1568392/1‑150 (MQ=255) caccaATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGGCAGtgctgg > 2:1923800/1‑124 (MQ=255) caccaATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGGCAGtgctgg < 1:1923800/125‑2 (MQ=255) caATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGa > 1:1111808/1‑150 (MQ=255) aaTGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGaa > 2:1642960/1‑150 (MQ=255) aaGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCa > 1:1671795/1‑150 (MQ=255) aGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCAc > 1:2382108/1‑150 (MQ=255) ggCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCAcc < 1:1535063/150‑1 (MQ=255) cAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGCTGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCCCCGGCACCCt < 2:470475/150‑1 (MQ=255) cTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGAt < 2:1821840/150‑1 (MQ=255) cTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGAt < 2:1671795/150‑1 (MQ=255) tCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGCACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATc < 1:58733/150‑1 (MQ=255) cgccgcACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGGGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCa > 1:887814/1‑150 (MQ=255) cgccgcACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAAAACACATCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCa > 1:887862/1‑150 (MQ=255) gccgcACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCAc < 2:2382108/150‑1 (MQ=255) a‑aCCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCaaa < 1:1642960/150‑1 (MQ=255) a‑aCCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCAAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCaaa < 1:1233578/150‑1 (MQ=255) ccTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCAc < 1:936695/141‑1 (MQ=255) ccTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCAc > 2:936695/1‑141 (MQ=255) gcgTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCa < 2:2361717/150‑1 (MQ=255) tggtgCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGTCACCCTGATCACCTCCAAAGAGATCCAGGGCCt < 1:318888/150‑1 (MQ=255) tggtgCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCt > 2:727871/1‑150 (MQ=255) tgctgcTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTctgat < 2:2143856/96‑3 (MQ=255) tgctgcTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTctgat > 1:2143856/1‑94 (MQ=255) gctgctGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGaa < 1:1588288/150‑1 (MQ=255) tgtgAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGaa < 1:727871/150‑1 (MQ=255) tgtgAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGaa > 2:1662514/1‑150 (MQ=255) tgtgAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGaa > 2:1483359/1‑150 (MQ=255) gtgAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCa < 2:2098054/68‑1 (MQ=255) gtgAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCa > 1:2098054/1‑68 (MQ=255) gtgAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCCTCACCTGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAAc < 1:1134078/150‑1 (MQ=255) ttCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTctgct < 2:1854485/83‑1 (MQ=255) ttCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTctgct > 1:1854485/1‑83 (MQ=255) cGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATg > 2:773306/1‑70 (MQ=255) cGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATg < 1:773306/70‑1 (MQ=255) cGCATTGCCAACGCCGTGCTGAAGGACGGGGACCAGAAGCCAGCACTGCCAGTGCTGGAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGc < 2:1156902/150‑1 (MQ=255) gCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCt > 1:2071200/1‑150 (MQ=255) ttCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGaa > 1:947200/1‑130 (MQ=255) ttCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGaa < 2:947200/130‑1 (MQ=255) ttCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCAc > 1:1547363/1‑150 (MQ=255) ccAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCAccc > 2:1435669/1‑150 (MQ=255) cAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGCTGCACGTCTGCTGCCAGAAAGCTTCACAGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCa > 2:1435689/1‑150 (MQ=255) cAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGc > 2:1792885/1‑121 (MQ=255) cAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGc < 1:1792885/121‑1 (MQ=255) aaCACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAg > 2:941040/1‑150 (MQ=255) acacCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCGTCACCCAgg > 2:1635824/1‑150 (MQ=255) ccGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAg < 1:349603/150‑1 (MQ=255) cGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAgc > 1:2245609/1‑150 (MQ=255) tGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAgcgg < 1:1662514/150‑2 (MQ=255) gCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTc < 2:758939/96‑1 (MQ=255) gCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTc > 1:758939/1‑96 (MQ=255) cTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAgcgcgc > 1:548341/1‑150 (MQ=255) cTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGACACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAgcgcgc < 1:166105/150‑1 (MQ=255) cAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAgagcgccgagcgc > 1:2036446/1‑150 (MQ=255) aGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAgagcgccgagcgcc < 2:887814/150‑1 (MQ=255) aGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAgagcgccgagcgcc < 2:887862/150‑1 (MQ=255) tactgcAGCACTGGCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCa > 2:294711/6‑123 (MQ=255) tactgcAGCACTGGCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCa < 1:294711/118‑1 (MQ=255) aTGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCGCCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGt < 1:2163239/150‑1 (MQ=255) tgcAGCACTGGCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGTGa > 1:374505/3‑150 (MQ=255) tgcAGCACTGGCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGTGa > 1:374314/3‑150 (MQ=255) ccAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCAc < 2:512862/71‑1 (MQ=255) ccAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCAc > 1:512862/1‑71 (MQ=255) cAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGTGAtg > 1:2353863/1‑150 (MQ=255) aGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGTGAtgg > 1:1735477/1‑150 (MQ=255) cTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGTGAtggtggt < 1:2230523/150‑1 (MQ=255) tGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGTGAtggtggtg > 2:348682/1‑150 (MQ=255) gCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGTGAtggtggtgg > 1:448445/1‑150 (MQ=255) gCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCCCCGAGCGCCGTGAtggtggtgg < 1:2265304/150‑1 (MQ=255) | GTGGCGGCGTCGACTTCTTCAAGCCGCACGAAACCACCAATGCCGAAGGCAACGCCAGCTCGCCGCACA‑ACCTGGCGCGTGGTGGTGCTGCTGTGAAGTTCCGCATTTCCAACACCGTGCTGAAGTACGGTGACCAGATGCCAGCACTGCCAGTGCTGCAGTACGACGATGCACGTCTGCTGCCAGAAAGCTTCACCGGCACCCTGATCACCTCCAAAGAGATCCAGGGCCTGGAACTGAACGCCGGCCGCTTCACCCAGGAAGCGCGCAAGAGCGCCGAGCGCCGTGATGGTGGTGG > NC_002947/325012‑325309 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |