| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,741,995 | G→A | 7.5% | intergenic (‑20/+393) | PP_3305 ← / ← PP_3306 | TerC family membrane protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,741,995 | 0 | G | A | 7.5% | 216.2 / 4.4 | 77 | intergenic (‑20/+393) | PP_3305/PP_3306 | TerC family membrane protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (35/36); new base A (3/3); total (38/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTCCCGCGGTGGAGCACACCTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAACATTTACAAATCTTGTCCATGACAAGCTAAAACGCTTGCAGTGAAAA > NC_002947/3741851‑3742144 | ttCCCGCGGTGGAGCACACCTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGtt < 2:2253654/150‑1 (MQ=255) ccGCGGTGGAGCACACCTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGaa < 1:2095019/150‑1 (MQ=255) cgcgGTGGAGCACACCTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGaac < 1:2137063/150‑1 (MQ=255) cgcgGTGGAGCACACCTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGaac < 1:2137144/150‑1 (MQ=255) ggTGGAGCACACCTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGaacaac < 2:692891/150‑1 (MQ=255) gTGGAGCACACCTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCGCCTACTGTACATTCAGCTTTGAACAACt > 2:1879957/1‑150 (MQ=255) aGCACACCTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCATAGTTGTTCAACTACGa < 2:1763780/150‑1 (MQ=255) gCACACCTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGAc > 2:340181/1‑150 (MQ=255) acCTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTAt < 2:208640/143‑1 (MQ=255) acCTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTAt > 1:208640/1‑143 (MQ=255) acCTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCg > 2:650894/1‑150 (MQ=255) acCTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCg > 1:962960/1‑150 (MQ=255) cTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGa > 2:828572/1‑143 (MQ=255) cTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGa < 1:828572/143‑1 (MQ=255) cTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGAc > 2:67087/1‑150 (MQ=255) cTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGAc > 1:598397/1‑150 (MQ=255) tCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAg < 1:1178658/124‑1 (MQ=255) tCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAg > 2:1178658/1‑124 (MQ=255) aaCAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCATAGTTGTTCAACTACGACta < 2:99280/132‑2 (MQ=255) aaCAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCATAGTTGTTCAACTACGACta > 1:99280/1‑131 (MQ=255) aGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTc > 1:429434/1‑150 (MQ=255) ttAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCagag > 2:827494/1‑150 (MQ=255) tAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAgg < 1:1102169/150‑1 (MQ=255) acaacaGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAg > 1:1271815/1‑103 (MQ=255) acaacaGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAg < 2:1271815/103‑1 (MQ=255) gAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCa < 2:1569110/150‑1 (MQ=255) aaaaaGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCAc < 2:598397/150‑1 (MQ=255) aaaGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTAt < 2:540684/104‑1 (MQ=255) aaaGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTAt > 1:540684/1‑104 (MQ=255) aGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGt < 2:1413714/91‑1 (MQ=255) aGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGt > 1:1413714/1‑91 (MQ=255) ggAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGCATAACCGTCAGAGGGGCCCGGCGTCACGAATa < 2:1866725/150‑1 (MQ=255) gAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGaacaac > 1:1353854/1‑97 (MQ=255) gAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGaacaac < 2:1353854/97‑1 (MQ=255) aaagccaaagccAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATaaa < 2:429434/150‑1 (MQ=255) gccaaagccaGAGGTCAGTCCCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCa < 1:1116987/123‑1 (MQ=255) gccaaagccaGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCa > 2:1116987/1‑123 (MQ=255) gccaaagccaGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGaa > 2:184705/1‑150 (MQ=255) aacacgccaGAGGTCATTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAAt < 2:1357477/145‑1 (MQ=255) caaagccaGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCATAGTTGTTCAACTacga > 1:2082691/1‑93 (MQ=255) caaagccaGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCATAGTTGTTCAACTACGa < 2:2082691/96‑1 (MQ=255) aaagccaGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAAttt > 2:460178/1‑150 (MQ=255) ccaGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCg < 1:841230/150‑1 (MQ=255) tCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGa < 1:460178/150‑1 (MQ=255) gTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTa > 1:410000/1‑150 (MQ=255) ctACCAAGACGTTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCAc < 1:605911/122‑1 (MQ=255) ctACCAAGACGTTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCAc > 2:605911/2‑123 (MQ=255) tACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTcc > 1:1462181/1‑84 (MQ=255) tACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTcc < 2:1462181/84‑1 (MQ=255) tACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCgg > 1:2014315/1‑94 (MQ=255) tACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCgg < 2:2014315/94‑1 (MQ=255) ccAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGc < 2:542795/150‑1 (MQ=255) cAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCTTTGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCt > 1:982345/1‑150 (MQ=255) aaCGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCaa < 2:1441808/150‑1 (MQ=255) aaCGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCaa < 1:67087/150‑1 (MQ=255) gTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGGCTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTa < 1:1999893/150‑1 (MQ=255) gTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTa > 2:2064911/1‑150 (MQ=255) gTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTa > 1:1467118/1‑150 (MQ=255) ttGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGaa < 2:410000/150‑1 (MQ=255) tGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGaaa < 1:2064911/150‑1 (MQ=255) ggTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGaaaa < 1:340181/150‑1 (MQ=255) gTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAAc > 2:677892/1‑150 (MQ=255) gTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAAc > 1:1031979/1‑150 (MQ=255) gTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAAc > 1:848095/1‑150 (MQ=255) cGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAGTGGAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAACATTTaacat < 1:1879957/150‑5 (MQ=255) cTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAACATTTACAAAt > 2:150858/1‑147 (MQ=255) cTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAACATTTACAAAt < 1:150858/147‑1 (MQ=255) aGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAACATTTACAAATCTTGTCCAt < 1:1490853/148‑1 (MQ=255) aGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAACATTTACAAATCTTGTCCAt > 2:1490853/1‑148 (MQ=255) aGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAACATTTACAAATCTTGTCCATGa > 2:1489172/1‑150 (MQ=255) aCATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAACATTTACAAATCTTGTCCAt < 1:1504527/146‑1 (MQ=255) aCATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAACATTTACAAATCTTGTCCAt > 2:1504527/1‑146 (MQ=255) aTGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAACATTTACAAATCTTGTCCATGACAAg > 1:2116386/1‑150 (MQ=255) gCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAACATTTACAAATCTTGTCCATGACAAGCTaa > 1:1132155/1‑150 (MQ=255) cctGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAACATTTACAAATCTTGTCCATGACAAGCTAAAACGCt < 1:827494/150‑1 (MQ=255) ctGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAACATTTACAAATCTTGTCCATGACAAGCTAAAACGCtt > 2:1744813/1‑150 (MQ=255) taGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGACTAAAGAATTTATCGAGCGCGAGAAGGCTGCAAGTAGAAAACATTTACAAATCTTGTCCATGACAAGCTAAAACGCTTGCAGt > 1:1155361/1‑150 (MQ=255) gTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAACATTTACAAATCTTGTCCATGACAAGCTAAAACGCTTGCAGTGaaaa > 2:1630643/1‑150 (MQ=255) | TTCCCGCGGTGGAGCACACCTAAGTCAAGCGCCAACAGTGTTAGCACAACAGCGAAAAAGGAAAGCCAAAGCCAGAGGTCAGTACCAAGAACGTCTTGGTAGAGATACGTACTAAGGGCAGACATGAGCCCCTCCTGTATAGTCGTAGTTGAACAACTATGACTCCGACATGGCGGTATAACCGTCAGAGGGGCCCGGCGTCACGAATAAAGAATTTATCGAGCGCGAGTAGGCTGCAAGTAGAAAACATTTACAAATCTTGTCCATGACAAGCTAAAACGCTTGCAGTGAAAA > NC_002947/3741851‑3742144 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |