Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,745,079 C→T 8.8% Q108* (CAA→TAA) ‡ paoC → aromatic aldehyde dehydrogenase molybdopterin‑binding subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,745,0790CT 8.8% 247.9 / 10.6 90Q108* (CAA→TAA) ‡paoCaromatic aldehyde dehydrogenase molybdopterin‑binding subunit
Reads supporting (aligned to +/- strand):  ref base C (41/41);  new base T (4/4);  total (45/45)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.03e-01

AAGCGATGCGCGTGCCCGGGGTGATCGCCGTGCTTGATCATGGCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGCCAACAGTCGCATGCAGCACCCGCAGAGACACCGCCGCC  >  NC_002947/3744930‑3745227
                                                                                                                                                     |                                                                                                                                                    
aaGCGATGCGCGTGCCCGGGGTGATCGCCGTGCTTGATCATGGCCAAGGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTc                                                                                                                                                      <  1:2090866/150‑1 (MQ=255)
          cgTGCCCGGGGTGATCGCCGTGCTTGATCATGGCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTTGACCGTNgta                                                                                                                                            <  2:1517260/150‑3 (MQ=255)
              cccGGGGTGATCGCCGTGCTTGATCATGGCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCtg                                                                                                                                        <  2:986023/150‑1 (MQ=255)
               ccGGGGTGATCGCCGTGCTTGATCATGGCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCtgg                                                                                                                                       <  1:2297009/150‑1 (MQ=255)
                 ggggTGATCGCCGTGCTTGATCATGGCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCtggtg                                                                                                                                     <  2:1998391/150‑1 (MQ=255)
                     tGATCGCCGTGCTTGATCATGGCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCTCAGGGGGCGCCGTTTAGGCCCTTGTTTGCTGATTGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTg                                                                                                                                 <  1:554903/150‑1 (MQ=255)
                            cGTGCTTGATCATGGCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAAc                                                                                                                          <  1:227385/150‑1 (MQ=255)
                            cGTGCTTGATCATGGCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAAc                                                                                                                          <  2:1364048/150‑1 (MQ=255)
                                cTTGATCATGGCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAAc                                                                                                                                                   >  2:2337829/1‑121 (MQ=255)
                                cTTGATCATGGCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAAc                                                                                                                                                   <  1:2337829/121‑1 (MQ=255)
                                 ttGATCATGGCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTGACCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCg                                                                                                                     >  1:148309/1‑150 (MQ=255)
                                 ttGATCATGGCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCg                                                                                                                     >  1:706803/1‑150 (MQ=255)
                                 ttGATCATGGCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCg                                                                                                                     >  2:367804/1‑150 (MQ=255)
                                  tGATCATGGCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGa                                                                                                                    <  2:1701722/150‑1 (MQ=255)
                                        tGGCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGGGGGTTAAGCTACAGGCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGc                                                                                                              >  2:1881007/1‑150 (MQ=255)
                                          gCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGccc                                                                                                            <  1:186267/150‑1 (MQ=255)
                                          gCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGccc                                                                                                            <  1:2216962/150‑1 (MQ=255)
                                                 tCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGc                                                                                                     <  1:1893625/150‑1 (MQ=255)
                                                  ccACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCa                                                                                                    <  1:367804/150‑1 (MQ=255)
                                                   cacaTATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAg                                                                                                   <  2:1736298/150‑1 (MQ=255)
                                                    acaTATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTa                                                                                                        <  1:538001/144‑1 (MQ=255)
                                                    acaTATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTa                                                                                                        >  2:538001/1‑144 (MQ=255)
                                                    acaTATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAgg                                                                                                  >  1:783108/1‑150 (MQ=255)
                                                    acaTATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAgg                                                                                                  >  1:295252/1‑150 (MQ=255)
                                                      atatTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAAc                                                                                                                  <  1:840706/132‑1 (MQ=255)
                                                      atatTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAAc                                                                                                                  >  2:840706/1‑132 (MQ=255)
                                                      atatTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGtt                                                                                                <  1:795250/150‑1 (MQ=255)
                                                        atTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCg                                                                                              >  1:980725/1‑150 (MQ=255)
                                                         tttCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGc                                                                                             <  2:234717/150‑1 (MQ=255)
                                                         tttCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGc                                                                                             >  1:165106/1‑150 (MQ=255)
                                                             cAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAAc                                                                                                                                                   >  1:2335385/1‑92 (MQ=255)
                                                             cAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAAc                                                                                                                                                   <  2:2335385/92‑1 (MQ=255)
                                                             cAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGAt                                                                                         >  2:1666890/1‑150 (MQ=255)
                                                              aGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATc                                                                                        <  1:1279688/150‑1 (MQ=255)
                                                                ttATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAg                                                                                                   >  1:35203/1‑137 (MQ=255)
                                                                ttATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAg                                                                                                   <  2:35203/137‑1 (MQ=255)
                                                                ttATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCATGCTTTTTGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAg                                                                                      >  2:919309/1‑150 (MQ=255)
                                                                   tGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAAAACTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGAt                                                                                   >  1:2375494/1‑150 (MQ=255)
                                                                    gacgacgacTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATc                                                                                  <  2:148309/150‑1 (MQ=255)
                                                                    gacgacgacTACAGCGACGCCCACGCCGAGCAGCGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATc                                                                                  <  2:980725/150‑1 (MQ=255)
                                                                     acgacgacTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCg                                                                                 >  1:498187/1‑150 (MQ=255)
                                                                     acgacgacTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCATTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCg                                                                                 >  1:435753/1‑150 (MQ=255)
                                                                          gacTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTAt                                                                            <  2:2375494/150‑1 (MQ=255)
                                                                               catggacgccaacgccGCGCAGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCgag                                                                      <  2:1451229/146‑1 (MQ=255)
                                                                               cAGCGACGCCGACGCCGCGCAGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCgag                                                                      <  2:1449324/150‑1 (MQ=255)
                                                                                aGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCaaa                                                                                                                           <  2:1717742/97‑1 (MQ=255)
                                                                                aGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCaaa                                                                                                                           >  1:1717742/1‑97 (MQ=255)
                                                                                aGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCgag                                                                      <  2:165106/150‑1 (MQ=255)
                                                                                   gacgccgacgccGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCgaggag                                                                   <  1:1956988/150‑1 (MQ=255)
                                                                                    acgccgacgccgCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGcc                                                                                                             <  2:1739466/107‑1 (MQ=255)
                                                                                    acgccgacgccgCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGcc                                                                                                             >  1:1739466/1‑107 (MQ=255)
                                                                                     cgccgacgccgCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGAAGACCAGGATCGAGTATGCCGAGGAGGc                                                                 <  1:1881007/150‑1 (MQ=255)
                                                                                       ccgacgccgCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGccc                                                               >  1:2136551/1‑150 (MQ=255)
                                                                                         gacgccgCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGATTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTGGCTGATTAGGGTATGGTATGCCGAAGAAGCccac                                                             >  1:524596/1‑150 (MQ=255)
                                                                                             ccgcGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTCAGAAAAACAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAga                                                         >  1:1994976/1‑150 (MQ=255)
                                                                                                     ggggCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAg                                                                                                   >  1:1021378/1‑100 (MQ=255)
                                                                                                     ggggCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAg                                                                                                   <  2:1021378/100‑1 (MQ=255)
                                                                                                        gcgcCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGc                                                                                                                                <  1:2007777/68‑1 (MQ=255)
                                                                                                        gcgcCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGc                                                                                                                                >  2:2007777/1‑68 (MQ=255)
                                                                                                          gcCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGgcgc                                            >  2:1977871/1‑150 (MQ=255)
                                                                                                             gTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATg                                         >  2:2178148/1‑150 (MQ=255)
                                                                                                                    cccTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGCCAACAg                                  >  2:1599664/1‑150 (MQ=255)
                                                                                                                     ccTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCgaggag                                                                   >  2:2280956/1‑116 (MQ=255)
                                                                                                                     ccTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCgaggag                                                                   <  1:2280956/116‑1 (MQ=255)
                                                                                                                     ccTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGCCAACAGt                                 >  1:1072158/1‑150 (MQ=255)
                                                                                                                      cTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGCCAACAGTc                                >  1:2112207/1‑150 (MQ=255)
                                                                                                                           tCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGCCAACAGTCGCATg                           <  1:1666890/150‑1 (MQ=255)
                                                                                                                             gatgatCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGc                                                                                                              >  2:2206257/1‑65 (MQ=255)
                                                                                                                             gatgatCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGc                                                                                                              <  1:2206257/65‑1 (MQ=255)
                                                                                                                             gatgatCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAg                                                                               >  2:314025/1‑96 (MQ=255)
                                                                                                                             gatgatCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAg                                                                               <  1:314025/96‑1 (MQ=255)
                                                                                                                             gatgatCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGCCAACAGTCGCATgca                         <  2:295252/150‑1 (MQ=255)
                                                                                                                                gatCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGCCAACAGTCGCATgcagca                      >  1:2146545/1‑150 (MQ=255)
                                                                                                                                  tCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATc                                                                                  >  1:337903/1‑88 (MQ=255)
                                                                                                                                  tCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATc                                                                                  <  2:337903/88‑1 (MQ=255)
                                                                                                                                      gttctccACAACGGTCAAACGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGCCAACAGTCGCATGCAGCACCCGCa                <  2:185560/147‑1 (MQ=255)
                                                                                                                                          tctACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGCCAACAGTCGCATGCAGCACCCGCAgaga            >  1:617575/1‑150 (MQ=255)
                                                                                                                                          gcgccAACGGTTGACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGCCAACAGTc                                >  1:1819490/5‑130 (MQ=255)
                                                                                                                                          gcgccAACGGTTGACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGCCAACAGTc                                <  2:1819490/126‑1 (MQ=255)
                                                                                                                                            tACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGa                                                                                <  2:1069258/80‑1 (MQ=255)
                                                                                                                                            tACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGa                                                                                >  1:1069258/1‑80 (MQ=255)
                                                                                                                                            tACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGCCAACAGTCGCATGCAGCACCCGCAGAGaca          >  2:1483094/1‑150 (MQ=255)
                                                                                                                                            tACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGCCAACAGTCGCATGCAGCACCCGCAGAGaca          >  1:229580/1‑150 (MQ=255)
                                                                                                                                            gccAACGGTTGACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGCCAACAGt                                 >  2:1549005/3‑127 (MQ=255)
                                                                                                                                            gccAACGGTTGACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGCCAACAGt                                 <  1:1549005/125‑1 (MQ=255)
                                                                                                                                             ccAACGGTTGACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGgc                                              >  2:1269639/2‑113 (MQ=255)
                                                                                                                                             ccAACGGTTGACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGgc                                              <  1:1269639/112‑1 (MQ=255)
                                                                                                                                             ccAACGGTTGACCGTTGGCGCTGGTGGTTACCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGAACACCAACCCCGTCGTAATGCATTTCTACTGTCGTATGCAGCACCCGCCGAGacac         >  2:391623/2‑150 (MQ=255)
                                                                                                                                                   gTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGc                                        <  1:678354/113‑1 (MQ=255)
                                                                                                                                                   gTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGc                                        >  2:678354/1‑113 (MQ=255)
                                                                                                                                                    tCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGCCAACAGTCGCATGCAGCACCCGCAGAGACAccgccgcc  >  1:1717209/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
AAGCGATGCGCGTGCCCGGGGTGATCGCCGTGCTTGATCATGGCCATCGTCCACATATTTCCAGTTATGACGACGACTACAGCGACGCCGACGCCGCGCAGGGGGCGCCGTTTAGGCCCTTGTTCGATGATCGAGTGCTCTACAACGGTCAACCGTTGGCGCTGGTGGTTGCCCAAACCCTCGAACTGGCCCGGTATGCAGGTTCGCTGATCAGGATCGAGTATGCCGAGGAGGCCCACCAGACCGACCTTGGCGCATGCCAACAGTCGCATGCAGCACCCGCAGAGACACCGCCGCC  >  NC_002947/3744930‑3745227

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: